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CBS51388_010366-T1, CBS51388_010366-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010366-T1
Unique NameCBS51388_010366-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1726871..1727951+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010366-T1 ID=CBS51388_010366-T1|Name=CBS51388_010366-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1081bp|location=Sequence derived from alignment at An16:1726871..1727951+ (Aspergillus niger CBS 513.88)
ATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCT
TCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTT
CCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGC
ACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAG
GGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGT
GTATGTGTCATCCATCACCACCACCAGCACCCTCTGGCAGTAGTTGGGCT
CTCGAGAACGGAAATAACAGCCGTATAACCAATCCACAGGGTATCCATCC
AAAGATGAACTTTCTATTCTTAGCGATGTCATAGATCAGATCAACGATAG
GCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTTG
GCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGACCGGTCGTGCTACGA
ACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAGTCTCAGCTGAAAGA
ATCGCAAATTCCAGCGTAAGTAGCTGACTTGTTTATTTGTTTCGGTCTTA
ATGTTTTTGTGATTGATCAATCCACCATGCTGACAAGCTATGCAAGGTTC
AACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGAAGACGCG
GTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGAAAATGCTTTGAACC
GTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACAGCCTCCG
CTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAAATGGTGG
TGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACCGGAGCTG
ACTACTCTCGCTGCTTTCATATCTCGTTGGCGTGGAGCTTGACAGGTCTG
TCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGAAGGTACG
TGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGAAACCATG
TTTCTAGTATACCGCTGCAGTAGAAAGATAA
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Coding sequence (CDS) from alignment at An16:1726871..1727951+

>CBS51388_010366-T1 ID=CBS51388_010366-T1|Name=CBS51388_010366-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3396bp|location=Sequence derived from alignment at An16:1726871..1727951+ (Aspergillus niger CBS 513.88)
ATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCT
TCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTT
CCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGC
ACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAG
GGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGT
GGTATCCATCCAAAGATGAACTTTCTATTCTTAGCGATGTCATAGATCAG
ATCAACGATAGGCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACA
TAGTGATCTTGGCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGACCGG
TCGTGCTACGAACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAGTCT
CAGCTGAAAGAATCGCAAATTCCAGCGTTCAACGTCACGACAAATAGCCT
CGACTGTGTCTCGAATTACGAGAAGACGCGGTGGTTTTATGTCTTACGTG
CTGAAAAGCCAGAGGAAAATGCTTTGAACCGTCTTCTTCGGCTGTCTAAT
CGAGCCCTGGCTCGGTTCGAACAGCCTCCGCTATACGAGTCGTCACAGGA
TGTGGCGGCTGTGCGGAAGTCAAATGGTGGTGGTACGACACTGCCACGGG
AATCGAGCGATTCTGGCCAAACCGGAGCTGACTACTCTCGCTGCTTTCAT
ATCTCGTTGGCGTGGAGCTTGACAGGTCTGTCGTCTGCAGAGAGTGAGCT
GATCGGAGGTGTGGATTTGCAGAAGTATACCGCTGCAGTAGAAAGATAAA
TGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCTT
CCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTTC
CTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGCA
CTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAGG
GTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGTG
GTATCCATCCAAAGATGAACTTTCTATTCTTAGCGATGTCATAGATCAGA
TCAACGATAGGCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACAT
AGTGATCTTGGCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGACCGGT
CGTGCTACGAACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAGTCTC
AGCTGAAAGAATCGCAAATTCCAGCGTTCAACGTCACGACAAATAGCCTC
GACTGTGTCTCGAATTACGAGAAGACGCGGTGGTTTTATGTCTTACGTGC
TGAAAAGCCAGAGGAAAATGCTTTGAACCGTCTTCTTCGGCTGTCTAATC
GAGCCCTGGCTCGGTTCGAACAGCCTCCGCTATACGAGTCGTCACAGGAT
GTGGCGGCTGTGCGGAAGTCAAATGGTGGTGGTACGACACTGCCACGGGA
ATCGAGCGATTCTGGCCAAACCGGAGCTGACTACTCTCGCTGCTTTCATA
TCTCGTTGGCGTGGAGCTTGACAGGTCTGTCGTCTGCAGAGAGTGAGCTG
ATCGGAGGTGTGGATTTGCAGAAGTATACCGCTGCAGTAGAAAGATAAAT
GGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCTTC
CTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTTCC
TCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGCAC
TCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAGGG
TCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGTGG
TATCCATCCAAAGATGAACTTTCTATTCTTAGCGATGTCATAGATCAGAT
CAACGATAGGCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACATA
GTGATCTTGGCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGACCGGTC
GTGCTACGAACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAGTCTCA
GCTGAAAGAATCGCAAATTCCAGCGTTCAACGTCACGACAAATAGCCTCG
ACTGTGTCTCGAATTACGAGAAGACGCGGTGGTTTTATGTCTTACGTGCT
GAAAAGCCAGAGGAAAATGCTTTGAACCGTCTTCTTCGGCTGTCTAATCG
AGCCCTGGCTCGGTTCGAACAGCCTCCGCTATACGAGTCGTCACAGGATG
TGGCGGCTGTGCGGAAGTCAAATGGTGGTGGTACGACACTGCCACGGGAA
TCGAGCGATTCTGGCCAAACCGGAGCTGACTACTCTCGCTGCTTTCATAT
CTCGTTGGCGTGGAGCTTGACAGGTCTGTCGTCTGCAGAGAGTGAGCTGA
TCGGAGGTGTGGATTTGCAGAAGTATACCGCTGCAGTAGAAAGATAAATG
GCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCTTCC
TCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTTCCT
CACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGCACT
CGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAGGGT
CATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGTGGT
ATCCATCCAAAGATGAACTTTCTATTCTTAGCGATGTCATAGATCAGATC
AACGATAGGCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACATAG
TGATCTTGGCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGACCGGTCG
TGCTACGAACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAGTCTCAG
CTGAAAGAATCGCAAATTCCAGCGTTCAACGTCACGACAAATAGCCTCGA
CTGTGTCTCGAATTACGAGAAGACGCGGTGGTTTTATGTCTTACGTGCTG
AAAAGCCAGAGGAAAATGCTTTGAACCGTCTTCTTCGGCTGTCTAATCGA
GCCCTGGCTCGGTTCGAACAGCCTCCGCTATACGAGTCGTCACAGGATGT
GGCGGCTGTGCGGAAGTCAAATGGTGGTGGTACGACACTGCCACGGGAAT
CGAGCGATTCTGGCCAAACCGGAGCTGACTACTCTCGCTGCTTTCATATC
TCGTTGGCGTGGAGCTTGACAGGTCTGTCGTCTGCAGAGAGTGAGCTGAT
CGGAGGTGTGGATTTGCAGAAGTATACCGCTGCAGTAGAAAGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0034477U6 snRNA 3'-end processing
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010366CBS51388_010366Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010366-T1.exon1CBS51388_010366-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010366-T1.exon2CBS51388_010366-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010366-T1.exon3CBS51388_010366-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010366-T1.exon4CBS51388_010366-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010366-T1.cdsCBS51388_010366-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010366-T1CBS51388_010366-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027521
DBxrefPFAM:PF09749
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1726871..1727951 +
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