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CBS51388_010442-T1, CBS51388_010442-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010442-T1
Unique NameCBS51388_010442-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1954646..1956280+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010442-T1 ID=CBS51388_010442-T1|Name=CBS51388_010442-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1635bp|location=Sequence derived from alignment at An16:1954646..1956280+ (Aspergillus niger CBS 513.88)
ATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCAT
CGATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGTGCGTACCACACATC
TTATGCTTCTCGAGTATGTCTTGGACTAACATGGCCCCATTGGGCATATT
TAGGCTGGCCCAGTAAAGGCTCCATCCGTCACAATCGCCGCTCCCGCTCC
CCAATCAAGCAAGCGCAATGCCGACAATGACGAAGATGAGGATAACGAAG
ATGTGATCTCCGAACCGGAAGACGAATCTCTGCCTGAGGACGAGGAGATG
CAGGAAGCCCCGGAAGCATCGAGCGATGCGGGCAGCGAAGAAGCTGAAGT
AGCCGCCGAGGCGCCCAGCCGCAAACGCAAGAGGACCACTGCAGAAGATG
TCGAAGACACATACATGCGTCGCATTGCAAAGGAGCAAAAGAAGGAGGAT
GAAAAGAGACGGGAAGAGAAGGCGAAGCGACAGAAGACGGTAGACGGTGA
GCAGGAAGAGGATGCCGAGCAATCAGAGGAAGAAGACGATGATGAGGAGA
GCTCTGAAGAGGATGAGGAAAAGAAGGCCGTCCCGAAGCACGAGAGCCAG
ACTGGTGATGCCGAGTCGAAGGAACTGGACAAATCCAACCGGACTGTTTT
CTTGGGCAATGTCTCTAGTGAGGCGATCAAGTCCAAGTCCGCTAAAAAGA
CCCTCCTCAAACACCTGGCATCTTTCCTCTCTACGCTTCCGGAGTCTACT
GGACCTCACAAGGTGGAATCTATTCGCTTCCGCTCCACAGCATTTGCCAG
TGGTGGCGGAGTCCCCAAGCGAGCCTCATTTGCCAAGCAAGAAGTTCTGG
ATGATACGACGCCGTGCACCAACGCATATGCCGTATACAGCACTGTGCAA
GCTGCGCGCAAGGCGCCCGCTGCGCTTAACGGTACCGTGGTTCTGGACCG
GCATTTGCGTGTTGACAGTGTCGCGCATCCTTCCCCAATCGACCATAAAC
GGTGTGTCTTCGTTGGTAACCTGGACTTTGTCGACAACGAGGTCAAGCCC
GACGATGAGCAGAAGAAGAAGAAGAAGCGAGCCCCCGCAGATGTTGAAGA
AGGTCTTTGGCGGACCTTCAACGCTCACACCGGTCGTTCGAATAAGGACA
AACCCAAGAATGGCAATGTTGAATCAGTCCGCGTGGTTCGCGACAGCCTT
ACTCGGGTCGGCAAAGGATTTGCCTACGTTCAGTTCTATGATCAAAACTG
TGTAGAAGAGGCTCTTGTACTCAATGGAAAGCATTACCCGCCTATGCTCC
CCCGCAAACTCCGCGTGTCGCGTGCCAAGAAGGTCTTGAAGAAGCGTGCA
GACGGTGGCAGCCAGAAGAAGACGCTTGGTGTGGCAGATAAGACCCTGCA
GGGTCGCGCTGGAAGACTATTTGGTCGGGCCGGTGCGGCCAAGGTGAAGG
CCGATGCGCAGAAGTCCATCTCGCAGAACTCGACGGTGTTCGAAGGCCAT
CGCGCCACCGAAGGTTCGCACATTCGGGTCAAGACGAAGAGCCGTGGCTC
CAAGGGCAAGCCGAACAACCGGAGCAGCAAGCGTGCTGCGGCCTACAAAG
CCGCTGGTGGGTGGAAGAAGGGGAAGACGGATTAA
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Coding sequence (CDS) from alignment at An16:1954646..1956280+

>CBS51388_010442-T1 ID=CBS51388_010442-T1|Name=CBS51388_010442-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3132bp|location=Sequence derived from alignment at An16:1954646..1956280+ (Aspergillus niger CBS 513.88)
ATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCAT
CGATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGCTGGCCCAGTAAAGG
CTCCATCCGTCACAATCGCCGCTCCCGCTCCCCAATCAAGCAAGCGCAAT
GCCGACAATGACGAAGATGAGGATAACGAAGATGTGATCTCCGAACCGGA
AGACGAATCTCTGCCTGAGGACGAGGAGATGCAGGAAGCCCCGGAAGCAT
CGAGCGATGCGGGCAGCGAAGAAGCTGAAGTAGCCGCCGAGGCGCCCAGC
CGCAAACGCAAGAGGACCACTGCAGAAGATGTCGAAGACACATACATGCG
TCGCATTGCAAAGGAGCAAAAGAAGGAGGATGAAAAGAGACGGGAAGAGA
AGGCGAAGCGACAGAAGACGGTAGACGGTGAGCAGGAAGAGGATGCCGAG
CAATCAGAGGAAGAAGACGATGATGAGGAGAGCTCTGAAGAGGATGAGGA
AAAGAAGGCCGTCCCGAAGCACGAGAGCCAGACTGGTGATGCCGAGTCGA
AGGAACTGGACAAATCCAACCGGACTGTTTTCTTGGGCAATGTCTCTAGT
GAGGCGATCAAGTCCAAGTCCGCTAAAAAGACCCTCCTCAAACACCTGGC
ATCTTTCCTCTCTACGCTTCCGGAGTCTACTGGACCTCACAAGGTGGAAT
CTATTCGCTTCCGCTCCACAGCATTTGCCAGTGGTGGCGGAGTCCCCAAG
CGAGCCTCATTTGCCAAGCAAGAAGTTCTGGATGATACGACGCCGTGCAC
CAACGCATATGCCGTATACAGCACTGTGCAAGCTGCGCGCAAGGCGCCCG
CTGCGCTTAACGGTACCGTGGTTCTGGACCGGCATTTGCGTGTTGACAGT
GTCGCGCATCCTTCCCCAATCGACCATAAACGGTGTGTCTTCGTTGGTAA
CCTGGACTTTGTCGACAACGAGGTCAAGCCCGACGATGAGCAGAAGAAGA
AGAAGAAGCGAGCCCCCGCAGATGTTGAAGAAGGTCTTTGGCGGACCTTC
AACGCTCACACCGGTCGTTCGAATAAGGACAAACCCAAGAATGGCAATGT
TGAATCAGTCCGCGTGGTTCGCGACAGCCTTACTCGGGTCGGCAAAGGAT
TTGCCTACGTTCAGTTCTATGATCAAAACTGTGTAGAAGAGGCTCTTGTA
CTCAATGGAAAGCATTACCCGCCTATGCTCCCCCGCAAACTCCGCGTGTC
GCGTGCCAAGAAGGTCTTGAAGAAGCGTGCAGACGGTGGCAGCCAGAAGA
AGACGCTTGGTGTGGCAGATAAGACCCTGCAGGGTCGCGCTGGAAGACTA
TTTGGTCGGGCCGGTGCGGCCAAGGTGAAGGCCGATGCGCAGAAGTCCAT
CTCGCAGAACTCGACGGTGTTCGAAGGCCATCGCGCCACCGAAGGTTCGC
ACATTCGGGTCAAGACGAAGAGCCGTGGCTCCAAGGGCAAGCCGAACAAC
CGGAGCAGCAAGCGTGCTGCGGCCTACAAAGCCGCTGGTGGGTGGAAGAA
GGGGAAGACGGATTAAATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGG
GGGCAAAGACATCCATCGATCCTACCCTAGCTGCCTTGTTTGAGACAAGT
GCTGGCCCAGTAAAGGCTCCATCCGTCACAATCGCCGCTCCCGCTCCCCA
ATCAAGCAAGCGCAATGCCGACAATGACGAAGATGAGGATAACGAAGATG
TGATCTCCGAACCGGAAGACGAATCTCTGCCTGAGGACGAGGAGATGCAG
GAAGCCCCGGAAGCATCGAGCGATGCGGGCAGCGAAGAAGCTGAAGTAGC
CGCCGAGGCGCCCAGCCGCAAACGCAAGAGGACCACTGCAGAAGATGTCG
AAGACACATACATGCGTCGCATTGCAAAGGAGCAAAAGAAGGAGGATGAA
AAGAGACGGGAAGAGAAGGCGAAGCGACAGAAGACGGTAGACGGTGAGCA
GGAAGAGGATGCCGAGCAATCAGAGGAAGAAGACGATGATGAGGAGAGCT
CTGAAGAGGATGAGGAAAAGAAGGCCGTCCCGAAGCACGAGAGCCAGACT
GGTGATGCCGAGTCGAAGGAACTGGACAAATCCAACCGGACTGTTTTCTT
GGGCAATGTCTCTAGTGAGGCGATCAAGTCCAAGTCCGCTAAAAAGACCC
TCCTCAAACACCTGGCATCTTTCCTCTCTACGCTTCCGGAGTCTACTGGA
CCTCACAAGGTGGAATCTATTCGCTTCCGCTCCACAGCATTTGCCAGTGG
TGGCGGAGTCCCCAAGCGAGCCTCATTTGCCAAGCAAGAAGTTCTGGATG
ATACGACGCCGTGCACCAACGCATATGCCGTATACAGCACTGTGCAAGCT
GCGCGCAAGGCGCCCGCTGCGCTTAACGGTACCGTGGTTCTGGACCGGCA
TTTGCGTGTTGACAGTGTCGCGCATCCTTCCCCAATCGACCATAAACGGT
GTGTCTTCGTTGGTAACCTGGACTTTGTCGACAACGAGGTCAAGCCCGAC
GATGAGCAGAAGAAGAAGAAGAAGCGAGCCCCCGCAGATGTTGAAGAAGG
TCTTTGGCGGACCTTCAACGCTCACACCGGTCGTTCGAATAAGGACAAAC
CCAAGAATGGCAATGTTGAATCAGTCCGCGTGGTTCGCGACAGCCTTACT
CGGGTCGGCAAAGGATTTGCCTACGTTCAGTTCTATGATCAAAACTGTGT
AGAAGAGGCTCTTGTACTCAATGGAAAGCATTACCCGCCTATGCTCCCCC
GCAAACTCCGCGTGTCGCGTGCCAAGAAGGTCTTGAAGAAGCGTGCAGAC
GGTGGCAGCCAGAAGAAGACGCTTGGTGTGGCAGATAAGACCCTGCAGGG
TCGCGCTGGAAGACTATTTGGTCGGGCCGGTGCGGCCAAGGTGAAGGCCG
ATGCGCAGAAGTCCATCTCGCAGAACTCGACGGTGTTCGAAGGCCATCGC
GCCACCGAAGGTTCGCACATTCGGGTCAAGACGAAGAGCCGTGGCTCCAA
GGGCAAGCCGAACAACCGGAGCAGCAAGCGTGCTGCGGCCTACAAAGCCG
CTGGTGGGTGGAAGAAGGGGAAGACGGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP12CBS51388_010442Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010442-T1.exon1CBS51388_010442-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010442-T1.exon2CBS51388_010442-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010442-T1.cdsCBS51388_010442-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010442-T1CBS51388_010442-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264IQ7
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034777
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductNucleolar protein 12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1954646..1956280 +
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