You are here

Home

CBS51388_010478-T1, CBS51388_010478-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010478-T1
Unique NameCBS51388_010478-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:2077735..2079554+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010478-T1 ID=CBS51388_010478-T1|Name=CBS51388_010478-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1820bp|location=Sequence derived from alignment at An16:2077735..2079554+ (Aspergillus niger CBS 513.88)
ATGGAGGGCTTTGATACCATGGCTATGCCTTACCTGGCCAGCCCGTTATC
GCTGGGCAATATACAGAGCACCGATTACCTCAATTCAATGTCCGGCATGG
ACCTACCTGAACAACGTTCTAATTTCGACTCTGAAACATTCGTGAGGTGA
GTTGTCGCTGACATCTCTCCCTCTATAGATCTCGTCTGACATACAATCCC
GCTAGTGGGGACGACATCGCATTTTCTCAACATGCGTTACCTCCCGCATC
GTTGAAGAGATTTCCCTCTGGTTATGAGGATCCATTCACAGACATGGTCG
CACCGTTCGAACCTGCGCCGCCCGAGCAACCTCCTGATTCTATAGATCAT
AACAATAAACTGCTGAGCTTCTCCATGCCTGCGTACGGCTTCACTCTATT
AGATTACTCTCTACGCCGCACCTCAATATCGCTCTCTGCTCAGCTGCACG
GCATGTTTTTTCTTGCAGAATCGCCTTGGACTACATCTCCTACCGAGAAT
GCCCCGCCTCAGCAAGGAGCGGAGCTGACGTGCTACCGCCGCAACCTATT
TCAGATAACAGGGTCTGTTACCCTCCCACGGAGCTTACGCTACATAATGA
CGGAGCAAGGCGATCGGATCCCTATCCTGGCTCAAGAACTCGCTGTGTCT
GCTACTGAGTCTGTTGAAGGCAATTCCGTCAAGATTATCTCGGTCCCTTG
GAAGACTCCCGCCACTAATGTGAATCCCTCGGCTGAAGATGGGAACAATA
ATTCTAGCGGGAACGGTGGTAACCCTAATAGCAACAATCCTACTATTAAG
GTTGAAAAGGAGCCACCTCCGATTCCACTAGATATCATGGCTGGACAAGA
CCTTGATACTGACTACGCCACCTTCCCCATTGCCTGGAAACGACTCCAAT
TCCGCGTTGCTACTGCGAATAATGGACGCAGAAAGGAGCTTCAGCAGCAC
TTTGTTATTCGCTTGAAGGTTGTAGCTACGCTGTCCACCGGTGCCAAGAT
ACCAGTCTGCGAGGTGCAGTCGGGCCCCGTCATAGTCCGGGGGCGGAGTC
CACGCAACTTTCAGTCTCGCAAGGACCTGCCATTGAGCAACAGTGCTGCG
GCGTCGCGGAAAAGCGCACAAGCCGCTCAGTCGGCTGCTGTTAACCGAAC
CACAACCGGCGATCCTGCGGCTAAGGCCAAAGCCACATTGAAGAGCAGTT
CCCCAGAGACGTCTACCTCACAAGGTGGTGTAGTTGGACAACAAGCTTCA
CCGGATTGGGCGCAAGTGCCGCCTCCCGTTGGCGGTGCGCATCCCTCGAC
GACTTTGCCTCACTCGACAGTATATACTCAGTCTAGCCCGGAGTTCTCGC
GGCCAACAGAAGCCCAACGACATCCAGCTGCCGCCCCCATCAATCTATCT
CTCCTCGAAGATGATGATGGTAATGATTCGGCTAACCCGGCTGATCCGGC
CAGGCCGGCGGCCTCATATACAAACGATATGTCTCACAAGCTTATGAACA
TGGATAATTCTGCAGCGCCCCCGGCCAAAATGCGCAAGTTGTCTCATGGC
TTGCCCGAAACACAATCCCGAAGCTCGTCCTCTTTGCCTTTACTGAATAC
TGCCAATATGCAGCAGCCCTTCGCTTCCACGCTCCCATTTCCAAATGAGA
GTGCCGACTTATTATATGAGTATTTTCCCTTGGGCTTGGATGATTGGCAA
GCACCCGTCGATGCAGTATATCGACCACATGTAGTGCATCACACAAACTT
ACCTGAAGTGAAATTTGTTGCTGCGCGCGGACGAAGCAAACGGTATTTCG
CCGCAGAAGATGTCTTTTGA
back to top

Coding sequence (CDS) from alignment at An16:2077735..2079554+

>CBS51388_010478-T1 ID=CBS51388_010478-T1|Name=CBS51388_010478-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3522bp|location=Sequence derived from alignment at An16:2077735..2079554+ (Aspergillus niger CBS 513.88)
ATGGAGGGCTTTGATACCATGGCTATGCCTTACCTGGCCAGCCCGTTATC
GCTGGGCAATATACAGAGCACCGATTACCTCAATTCAATGTCCGGCATGG
ACCTACCTGAACAACGTTCTAATTTCGACTCTGAAACATTCGTGAGTGGG
GACGACATCGCATTTTCTCAACATGCGTTACCTCCCGCATCGTTGAAGAG
ATTTCCCTCTGGTTATGAGGATCCATTCACAGACATGGTCGCACCGTTCG
AACCTGCGCCGCCCGAGCAACCTCCTGATTCTATAGATCATAACAATAAA
CTGCTGAGCTTCTCCATGCCTGCGTACGGCTTCACTCTATTAGATTACTC
TCTACGCCGCACCTCAATATCGCTCTCTGCTCAGCTGCACGGCATGTTTT
TTCTTGCAGAATCGCCTTGGACTACATCTCCTACCGAGAATGCCCCGCCT
CAGCAAGGAGCGGAGCTGACGTGCTACCGCCGCAACCTATTTCAGATAAC
AGGGTCTGTTACCCTCCCACGGAGCTTACGCTACATAATGACGGAGCAAG
GCGATCGGATCCCTATCCTGGCTCAAGAACTCGCTGTGTCTGCTACTGAG
TCTGTTGAAGGCAATTCCGTCAAGATTATCTCGGTCCCTTGGAAGACTCC
CGCCACTAATGTGAATCCCTCGGCTGAAGATGGGAACAATAATTCTAGCG
GGAACGGTGGTAACCCTAATAGCAACAATCCTACTATTAAGGTTGAAAAG
GAGCCACCTCCGATTCCACTAGATATCATGGCTGGACAAGACCTTGATAC
TGACTACGCCACCTTCCCCATTGCCTGGAAACGACTCCAATTCCGCGTTG
CTACTGCGAATAATGGACGCAGAAAGGAGCTTCAGCAGCACTTTGTTATT
CGCTTGAAGGTTGTAGCTACGCTGTCCACCGGTGCCAAGATACCAGTCTG
CGAGGTGCAGTCGGGCCCCGTCATAGTCCGGGGGCGGAGTCCACGCAACT
TTCAGTCTCGCAAGGACCTGCCATTGAGCAACAGTGCTGCGGCGTCGCGG
AAAAGCGCACAAGCCGCTCAGTCGGCTGCTGTTAACCGAACCACAACCGG
CGATCCTGCGGCTAAGGCCAAAGCCACATTGAAGAGCAGTTCCCCAGAGA
CGTCTACCTCACAAGGTGGTGTAGTTGGACAACAAGCTTCACCGGATTGG
GCGCAAGTGCCGCCTCCCGTTGGCGGTGCGCATCCCTCGACGACTTTGCC
TCACTCGACAGTATATACTCAGTCTAGCCCGGAGTTCTCGCGGCCAACAG
AAGCCCAACGACATCCAGCTGCCGCCCCCATCAATCTATCTCTCCTCGAA
GATGATGATGGTAATGATTCGGCTAACCCGGCTGATCCGGCCAGGCCGGC
GGCCTCATATACAAACGATATGTCTCACAAGCTTATGAACATGGATAATT
CTGCAGCGCCCCCGGCCAAAATGCGCAAGTTGTCTCATGGCTTGCCCGAA
ACACAATCCCGAAGCTCGTCCTCTTTGCCTTTACTGAATACTGCCAATAT
GCAGCAGCCCTTCGCTTCCACGCTCCCATTTCCAAATGAGAGTGCCGACT
TATTATATGAGTATTTTCCCTTGGGCTTGGATGATTGGCAAGCACCCGTC
GATGCAGTATATCGACCACATGTAGTGCATCACACAAACTTACCTGAAGT
GAAATTTGTTGCTGCGCGCGGACGAAGCAAACGGTATTTCGCCGCAGAAG
ATGTCTTTTGAATGGAGGGCTTTGATACCATGGCTATGCCTTACCTGGCC
AGCCCGTTATCGCTGGGCAATATACAGAGCACCGATTACCTCAATTCAAT
GTCCGGCATGGACCTACCTGAACAACGTTCTAATTTCGACTCTGAAACAT
TCGTGAGTGGGGACGACATCGCATTTTCTCAACATGCGTTACCTCCCGCA
TCGTTGAAGAGATTTCCCTCTGGTTATGAGGATCCATTCACAGACATGGT
CGCACCGTTCGAACCTGCGCCGCCCGAGCAACCTCCTGATTCTATAGATC
ATAACAATAAACTGCTGAGCTTCTCCATGCCTGCGTACGGCTTCACTCTA
TTAGATTACTCTCTACGCCGCACCTCAATATCGCTCTCTGCTCAGCTGCA
CGGCATGTTTTTTCTTGCAGAATCGCCTTGGACTACATCTCCTACCGAGA
ATGCCCCGCCTCAGCAAGGAGCGGAGCTGACGTGCTACCGCCGCAACCTA
TTTCAGATAACAGGGTCTGTTACCCTCCCACGGAGCTTACGCTACATAAT
GACGGAGCAAGGCGATCGGATCCCTATCCTGGCTCAAGAACTCGCTGTGT
CTGCTACTGAGTCTGTTGAAGGCAATTCCGTCAAGATTATCTCGGTCCCT
TGGAAGACTCCCGCCACTAATGTGAATCCCTCGGCTGAAGATGGGAACAA
TAATTCTAGCGGGAACGGTGGTAACCCTAATAGCAACAATCCTACTATTA
AGGTTGAAAAGGAGCCACCTCCGATTCCACTAGATATCATGGCTGGACAA
GACCTTGATACTGACTACGCCACCTTCCCCATTGCCTGGAAACGACTCCA
ATTCCGCGTTGCTACTGCGAATAATGGACGCAGAAAGGAGCTTCAGCAGC
ACTTTGTTATTCGCTTGAAGGTTGTAGCTACGCTGTCCACCGGTGCCAAG
ATACCAGTCTGCGAGGTGCAGTCGGGCCCCGTCATAGTCCGGGGGCGGAG
TCCACGCAACTTTCAGTCTCGCAAGGACCTGCCATTGAGCAACAGTGCTG
CGGCGTCGCGGAAAAGCGCACAAGCCGCTCAGTCGGCTGCTGTTAACCGA
ACCACAACCGGCGATCCTGCGGCTAAGGCCAAAGCCACATTGAAGAGCAG
TTCCCCAGAGACGTCTACCTCACAAGGTGGTGTAGTTGGACAACAAGCTT
CACCGGATTGGGCGCAAGTGCCGCCTCCCGTTGGCGGTGCGCATCCCTCG
ACGACTTTGCCTCACTCGACAGTATATACTCAGTCTAGCCCGGAGTTCTC
GCGGCCAACAGAAGCCCAACGACATCCAGCTGCCGCCCCCATCAATCTAT
CTCTCCTCGAAGATGATGATGGTAATGATTCGGCTAACCCGGCTGATCCG
GCCAGGCCGGCGGCCTCATATACAAACGATATGTCTCACAAGCTTATGAA
CATGGATAATTCTGCAGCGCCCCCGGCCAAAATGCGCAAGTTGTCTCATG
GCTTGCCCGAAACACAATCCCGAAGCTCGTCCTCTTTGCCTTTACTGAAT
ACTGCCAATATGCAGCAGCCCTTCGCTTCCACGCTCCCATTTCCAAATGA
GAGTGCCGACTTATTATATGAGTATTTTCCCTTGGGCTTGGATGATTGGC
AAGCACCCGTCGATGCAGTATATCGACCACATGTAGTGCATCACACAAAC
TTACCTGAAGTGAAATTTGTTGCTGCGCGCGGACGAAGCAAACGGTATTT
CGCCGCAGAAGATGTCTTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010478CBS51388_010478Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010478-T1.exon1CBS51388_010478-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010478-T1.exon2CBS51388_010478-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010478-T1.cdsCBS51388_010478-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010478-T1CBS51388_010478-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008967
DBxrefInterPro:IPR037141
DBxrefInterPro:IPR024061
DBxrefPFAM:PF05224
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:2077735..2079554 +
Powered by Drupal