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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:177544..179541+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010549-T1 ID=CBS51388_010549-T1|Name=CBS51388_010549-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1998bp|location=Sequence derived from alignment at An17:177544..179541+ (Aspergillus niger CBS 513.88)
ATGCCTTCCACTCTGTGGGAGAAGACGAAAGGCACATCTAAAAAAGGATT
CGATAAAGCATGGCATACCCTCGACAAGCTGGGCGATCCCGTCAACCGGC
TTTCCTATAAGGTCGGCGCAGAGGCTTTCTGGCCCATGACCCTCGATAAA
GAAAGCGATAAAGCGGCGCGCATTTTGCGAAGTTTCTGCAAAGATGGTTT
TTATTCCAACGATGAAGCCGAACGGAAAAGCACCGACAGCTCGATCAGCA
AAGAATCCGGCAAGATAGATCGCCCCAAGGGCAAGCAGCGGGTCTTAAAG
AAGATCCCCGCTAGGGTTATACAGCGGGCTAAGGGTCTCGCTATCTTCAC
TACTATGCGCACAGGCCTCTGGGTCAGTGGCTCGGGTGGTAGTGGTGTGC
TCCTGGCGCGGACCCCAGATACCAACGAATGGAGTCCGCCTTCCGGCATT
ATGCTTCATACGGCTGGTATCGGTTTTCTGGCGGGCGTGGATATCTATGA
CTGTGTGGTGGTCATCAATACCTACGAGGCCTTGGAGGCTTTCAAAAAAG
TGCGGTGCACCTTGGGTGGAGAAGTCAGCGCTGCAGCCGGTCCGGTTGGG
ATGGGCGGCGTGCTTGATTCGGAAGTGCACAAGCGCCAGGCCCCCATCTG
GACTTACATGAAGAGTCGTGGTCTGTATGCTGGCGTCGCAGTGGATGGTA
CCATTATTATCGAGCGTACCGATGAGAACGAGCGTTTCTATGGCGAGCGC
ATATCGGTTACTGACATTCTCGCGGGCAAGGCCAAACGGCCTCCTGCATC
GATTCAAACCCTCCTCAACACCGTCAAAGCTGCCGAGGGCAACCCAACGG
TGGACGAGAACTTGCTGCCACCCGGCGAAACCCCTGGGGATGTTGAGCTT
GCGCCGGGACCGGGCTCGTTCGGAATTCCCGACCCGGAGGACCCTGATCC
ATTCGGTGTCAAGGCGCTGGAGGCGGAGGGTCTCTTCATTCGCGAAGCTG
GATCAAAATCCAGACCATCGCAGGAAGCGTTTGAGTTTAAACCCGGCCCG
AACAGCCCGATATTTGCGACTTTCCGACGGAGCATCGACAGCTCACCACG
CAATAGCTGGCGAGCAAGTGTGCAGAGCTACGCCAGTATGGATCGAGGGA
CCCAAACTGATGATGGTCCTACGACTGCCCCGACCTCTATCAGTCGTGCC
TCCTCCCGGAGCTACCGTGATGTATCCGACCGGGCCGAAACCAGTCCTTG
GGACAACGAGGAGGGACGCTGGGAGACTGTCATCCCGGAACATGATGAAT
ACCACGGTCGGGATGATGTTGAAGAGGACGTGGATCTGGAGGATGACGAT
GTGGAAATTCACGAGGTCAGCAGCGCCACTGTGTCGAAGCGCGAGAGTGC
TGCCCATTCTCCTGTCCCGATTGAAGATTCCATCGCGCCTGTCGAATTCA
AGCGTCACTCGCCTACCTTTACCAGGGCACGCCTTGTGACGATCCCTAAG
CGGATTCCCCCGGCCCTTCCACCCCGGAACCCCCAGCGGACACCCGCTCC
CGTCTCGACCTCGACTCCTAGCTCGCCTACGGCGAACCCCTACGCACACA
GCCGCCGGCGTTCCGTGGCATCTAGTCCGGGACACGCCACATATGGGTTC
ACAGGGATGCCTCTTTACCACAAGAGCGATTCGGAAAGTGACCTGTCCTC
CGCTGGCGCTCCCGAGTCGTCCAACAAGCCGTCACCAGACCGCGAAGAGT
TCCACTCGGTATCCAGTCTGCACGACTCGGACGTGGCATCCGAGAAGGAG
ACCGAGGCCAAGGAGGCCAAGGAGATCGAGACCGAGGAGAACCACGAGCC
ATCATCTGATGCGAGCACTCCCACATATGTTCACGAGTCTGATGTCTCGC
CCTGGGCGAAGTCTGACACAGACCTGGCACCCACGAAGACCATCACTTCT
GATGACCACGTCAAAGTTGATTCTACGGCACAGCCTCAGGCTGTGTGA back to topCoding sequence (CDS) from alignment at An17:177544..179541+ >CBS51388_010549-T1 ID=CBS51388_010549-T1|Name=CBS51388_010549-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1998bp|location=Sequence derived from alignment at An17:177544..179541+ (Aspergillus niger CBS 513.88)
ATGCCTTCCACTCTGTGGGAGAAGACGAAAGGCACATCTAAAAAAGGATT
CGATAAAGCATGGCATACCCTCGACAAGCTGGGCGATCCCGTCAACCGGC
TTTCCTATAAGGTCGGCGCAGAGGCTTTCTGGCCCATGACCCTCGATAAA
GAAAGCGATAAAGCGGCGCGCATTTTGCGAAGTTTCTGCAAAGATGGTTT
TTATTCCAACGATGAAGCCGAACGGAAAAGCACCGACAGCTCGATCAGCA
AAGAATCCGGCAAGATAGATCGCCCCAAGGGCAAGCAGCGGGTCTTAAAG
AAGATCCCCGCTAGGGTTATACAGCGGGCTAAGGGTCTCGCTATCTTCAC
TACTATGCGCACAGGCCTCTGGGTCAGTGGCTCGGGTGGTAGTGGTGTGC
TCCTGGCGCGGACCCCAGATACCAACGAATGGAGTCCGCCTTCCGGCATT
ATGCTTCATACGGCTGGTATCGGTTTTCTGGCGGGCGTGGATATCTATGA
CTGTGTGGTGGTCATCAATACCTACGAGGCCTTGGAGGCTTTCAAAAAAG
TGCGGTGCACCTTGGGTGGAGAAGTCAGCGCTGCAGCCGGTCCGGTTGGG
ATGGGCGGCGTGCTTGATTCGGAAGTGCACAAGCGCCAGGCCCCCATCTG
GACTTACATGAAGAGTCGTGGTCTGTATGCTGGCGTCGCAGTGGATGGTA
CCATTATTATCGAGCGTACCGATGAGAACGAGCGTTTCTATGGCGAGCGC
ATATCGGTTACTGACATTCTCGCGGGCAAGGCCAAACGGCCTCCTGCATC
GATTCAAACCCTCCTCAACACCGTCAAAGCTGCCGAGGGCAACCCAACGG
TGGACGAGAACTTGCTGCCACCCGGCGAAACCCCTGGGGATGTTGAGCTT
GCGCCGGGACCGGGCTCGTTCGGAATTCCCGACCCGGAGGACCCTGATCC
ATTCGGTGTCAAGGCGCTGGAGGCGGAGGGTCTCTTCATTCGCGAAGCTG
GATCAAAATCCAGACCATCGCAGGAAGCGTTTGAGTTTAAACCCGGCCCG
AACAGCCCGATATTTGCGACTTTCCGACGGAGCATCGACAGCTCACCACG
CAATAGCTGGCGAGCAAGTGTGCAGAGCTACGCCAGTATGGATCGAGGGA
CCCAAACTGATGATGGTCCTACGACTGCCCCGACCTCTATCAGTCGTGCC
TCCTCCCGGAGCTACCGTGATGTATCCGACCGGGCCGAAACCAGTCCTTG
GGACAACGAGGAGGGACGCTGGGAGACTGTCATCCCGGAACATGATGAAT
ACCACGGTCGGGATGATGTTGAAGAGGACGTGGATCTGGAGGATGACGAT
GTGGAAATTCACGAGGTCAGCAGCGCCACTGTGTCGAAGCGCGAGAGTGC
TGCCCATTCTCCTGTCCCGATTGAAGATTCCATCGCGCCTGTCGAATTCA
AGCGTCACTCGCCTACCTTTACCAGGGCACGCCTTGTGACGATCCCTAAG
CGGATTCCCCCGGCCCTTCCACCCCGGAACCCCCAGCGGACACCCGCTCC
CGTCTCGACCTCGACTCCTAGCTCGCCTACGGCGAACCCCTACGCACACA
GCCGCCGGCGTTCCGTGGCATCTAGTCCGGGACACGCCACATATGGGTTC
ACAGGGATGCCTCTTTACCACAAGAGCGATTCGGAAAGTGACCTGTCCTC
CGCTGGCGCTCCCGAGTCGTCCAACAAGCCGTCACCAGACCGCGAAGAGT
TCCACTCGGTATCCAGTCTGCACGACTCGGACGTGGCATCCGAGAAGGAG
ACCGAGGCCAAGGAGGCCAAGGAGATCGAGACCGAGGAGAACCACGAGCC
ATCATCTGATGCGAGCACTCCCACATATGTTCACGAGTCTGATGTCTCGC
CCTGGGCGAAGTCTGACACAGACCTGGCACCCACGAAGACCATCACTTCT
GATGACCACGTCAAAGTTGATTCTACGGCACAGCCTCAGGCTGTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007461 |
| DBxref | PFAM:PF04366 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:177544..179541 + |
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