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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:188915..190738+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010554-T1 ID=CBS51388_010554-T1|Name=CBS51388_010554-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1824bp|location=Sequence derived from alignment at An17:188915..190738+ (Aspergillus niger CBS 513.88)
ATGCCAGCCGTACGGGCCTGTACAAACTGTGTCCGAGCAAAGACGAGATG
TGCCCTCAGTGGAGCTTCCGGGACATGTGAACGGTTAGTCCGCTCTCATT
GATATGCTAGTCAAGCTGACAGTCCTAAAGATGTGTACGCCTTCGGAAGG
CTTGTCAGCCATCGCCTCCCGTGCGCAAGCGCCGGGTAGTGGCCAAGGCC
TCTGCGAAAGATGTCCAGAAGCTGGAGGAGAAGCTGGACGGACTGTACAG
TATCCTCCAGGGCCAGACGGGTCTGCTGAACGGACCGATGCAGCCGGCCC
AGGAGCCTGTAATTCCAGCACCTCACACGGACGAAACTGTATCGTTGCCT
ATTCCTCTAACACAAGATCTGTCAGGAACAACATGTAGTCCGGCTGCTCC
GTCTTTGGAACAGCCTCGGGCCACTTCTTACGAGCCTAACGATGATGATG
CCGAGCTGTATTTAGCTAGGTTCCGCTCTGACTTTATTGACCATTTGCCC
TTTCTTGACATTCCAGTATCTCAAAGTGCCCATCAGCTGCATGAGGAGAG
TCCGCTGCTGTGGCTAGCTATAATGACTGTTGCATCTACTCGGACCACGC
AGCAGAAAGCCATGTCCAGGCAGATGAGAGAGGCATTTGGCCGCGAGGCG
TTTGTAGAAGGCACGAGGAGTATAGACTTCTTGTTGTCAGTCCTGGTATA
TGCCACCTGGGATCGCTACTACGCCCTTGACAAGCCGCTTTTTACTAGTT
TGATGCAGTTGGCTATTGCAATTGTATACGACCTAGGCCTGGACAAGCCG
CCGGTGCAGGACCCGAGTCTTCTGCTTAGCTATGACCTGAAGGGACACAA
TCGGCCGTCCCATTACTCTCGGCTGCCTACCATGCAGGAACGCAGAGCTT
TGCTGGGTTGCTTTCTTGTGAGCTTCACGTAGGTGCAACGGAACTGTGTT
ATAAATGCCTTCTGACGTTCCAAGGTCGAATGTGTCCCGAAACGGCGAGC
CACTTCAGTGGACGCCCTCATTCGACGACTGTCTTCGCGTATTCGAAGAA
GAAAAAGAATCAGACAATGACACCCTGCTGGTGCAGCTTGTCAAACTACG
CCTCATCACAGGAAAGGTGATGGAGGCACCAGGGACAGAGCCAAGTGACA
CCCAAATCCTGCGGCTATCAGCTTCAATCTATTTGCAGTCATTTCAGAAG
CAAATTCGCACATTCCGATCACAAATCCCTCTCGAACTCACCAATAACAG
TAAGCTCCCGTTCCCAATCAAATACCCAGCTAACGGCATCACAGAGATCC
TGCAAATGGAGTTATACAGCGCAGAAATGATGATCCACGAGATTGGCTTC
TCATCAGACCCAACTATCTTTCCTCGGCAATCAAACCAACAATTTGAATG
CCTATGTGCCTGCCTCCAAACCATCAAGTCATGGACCGACAACATTCTGG
CCCTGCAACCTGTAGAGTATGTCGGGCTTTCGTGCTTGATGTGTGCCAAC
ATGGCGCGCAGCTTCATCAACCTCTACCGTCTCACTGTCTGTGACTATCC
CGTTTGGGACCGTAAGCTGGTGCAGGAAACGATAGACGTGTCCTGGGTAC
TGGAAAGGGCGGCGCAGCGGTTCACGCAGGTCAAAGACGCGGCGGGACTC
GATCCAGAAGGCACTCAGGAACTGGATTTCTTCATGATTATGGCAGCGAA
AATGGAGGCCATGAAGATGTCGTGGGACACGGCGGTGATGCCAATGATGG
AAGACTCGTGGGAGCCGACTTTGGATGATCTGGACATGTTCTCTAGCGAA
TTCCGCAATATGTGGAGTTGGTGA back to topCoding sequence (CDS) from alignment at An17:188915..190738+ >CBS51388_010554-T1 ID=CBS51388_010554-T1|Name=CBS51388_010554-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6744bp|location=Sequence derived from alignment at An17:188915..190738+ (Aspergillus niger CBS 513.88)
ATGCCAGCCGTACGGGCCTGTACAAACTGTGTCCGAGCAAAGACGAGATG
TGCCCTCAGTGGAGCTTCCGGGACATGTGAACGATGTGTACGCCTTCGGA
AGGCTTGTCAGCCATCGCCTCCCGTGCGCAAGCGCCGGGTAGTGGCCAAG
GCCTCTGCGAAAGATGTCCAGAAGCTGGAGGAGAAGCTGGACGGACTGTA
CAGTATCCTCCAGGGCCAGACGGGTCTGCTGAACGGACCGATGCAGCCGG
CCCAGGAGCCTGTAATTCCAGCACCTCACACGGACGAAACTGTATCGTTG
CCTATTCCTCTAACACAAGATCTGTCAGGAACAACATGTAGTCCGGCTGC
TCCGTCTTTGGAACAGCCTCGGGCCACTTCTTACGAGCCTAACGATGATG
ATGCCGAGCTGTATTTAGCTAGGTTCCGCTCTGACTTTATTGACCATTTG
CCCTTTCTTGACATTCCAGTATCTCAAAGTGCCCATCAGCTGCATGAGGA
GAGTCCGCTGCTGTGGCTAGCTATAATGACTGTTGCATCTACTCGGACCA
CGCAGCAGAAAGCCATGTCCAGGCAGATGAGAGAGGCATTTGGCCGCGAG
GCGTTTGTAGAAGGCACGAGGAGTATAGACTTCTTGTTGTCAGTCCTGGT
ATATGCCACCTGGGATCGCTACTACGCCCTTGACAAGCCGCTTTTTACTA
GTTTGATGCAGTTGGCTATTGCAATTGTATACGACCTAGGCCTGGACAAG
CCGCCGGTGCAGGACCCGAGTCTTCTGCTTAGCTATGACCTGAAGGGACA
CAATCGGCCGTCCCATTACTCTCGGCTGCCTACCATGCAGGAACGCAGAG
CTTTGCTGGGTTGCTTTCTTGTGAGCTTCACGTCGAATGTGTCCCGAAAC
GGCGAGCCACTTCAGTGGACGCCCTCATTCGACGACTGTCTTCGCGTATT
CGAAGAAGAAAAAGAATCAGACAATGACACCCTGCTGGTGCAGCTTGTCA
AACTACGCCTCATCACAGGAAAGGTGATGGAGGCACCAGGGACAGAGCCA
AGTGACACCCAAATCCTGCGGCTATCAGCTTCAATCTATTTGCAGTCATT
TCAGAAGCAAATTCGCACATTCCGATCACAAATCCCTCTCGAACTCACCA
ATAACAAGATCCTGCAAATGGAGTTATACAGCGCAGAAATGATGATCCAC
GAGATTGGCTTCTCATCAGACCCAACTATCTTTCCTCGGCAATCAAACCA
ACAATTTGAATGCCTATGTGCCTGCCTCCAAACCATCAAGTCATGGACCG
ACAACATTCTGGCCCTGCAACCTGTAGAGTATGTCGGGCTTTCGTGCTTG
ATGTGTGCCAACATGGCGCGCAGCTTCATCAACCTCTACCGTCTCACTGT
CTGTGACTATCCCGTTTGGGACCGTAAGCTGGTGCAGGAAACGATAGACG
TGTCCTGGGTACTGGAAAGGGCGGCGCAGCGGTTCACGCAGGTCAAAGAC
GCGGCGGGACTCGATCCAGAAGGCACTCAGGAACTGGATTTCTTCATGAT
TATGGCAGCGAAAATGGAGGCCATGAAGATGTCGTGGGACACGGCGGTGA
TGCCAATGATGGAAGACTCGTGGGAGCCGACTTTGGATGATCTGGACATG
TTCTCTAGCGAATTCCGCAATATGTGGAGTTGGTGAATGCCAGCCGTACG
GGCCTGTACAAACTGTGTCCGAGCAAAGACGAGATGTGCCCTCAGTGGAG
CTTCCGGGACATGTGAACGATGTGTACGCCTTCGGAAGGCTTGTCAGCCA
TCGCCTCCCGTGCGCAAGCGCCGGGTAGTGGCCAAGGCCTCTGCGAAAGA
TGTCCAGAAGCTGGAGGAGAAGCTGGACGGACTGTACAGTATCCTCCAGG
GCCAGACGGGTCTGCTGAACGGACCGATGCAGCCGGCCCAGGAGCCTGTA
ATTCCAGCACCTCACACGGACGAAACTGTATCGTTGCCTATTCCTCTAAC
ACAAGATCTGTCAGGAACAACATGTAGTCCGGCTGCTCCGTCTTTGGAAC
AGCCTCGGGCCACTTCTTACGAGCCTAACGATGATGATGCCGAGCTGTAT
TTAGCTAGGTTCCGCTCTGACTTTATTGACCATTTGCCCTTTCTTGACAT
TCCAGTATCTCAAAGTGCCCATCAGCTGCATGAGGAGAGTCCGCTGCTGT
GGCTAGCTATAATGACTGTTGCATCTACTCGGACCACGCAGCAGAAAGCC
ATGTCCAGGCAGATGAGAGAGGCATTTGGCCGCGAGGCGTTTGTAGAAGG
CACGAGGAGTATAGACTTCTTGTTGTCAGTCCTGGTATATGCCACCTGGG
ATCGCTACTACGCCCTTGACAAGCCGCTTTTTACTAGTTTGATGCAGTTG
GCTATTGCAATTGTATACGACCTAGGCCTGGACAAGCCGCCGGTGCAGGA
CCCGAGTCTTCTGCTTAGCTATGACCTGAAGGGACACAATCGGCCGTCCC
ATTACTCTCGGCTGCCTACCATGCAGGAACGCAGAGCTTTGCTGGGTTGC
TTTCTTGTGAGCTTCACGTCGAATGTGTCCCGAAACGGCGAGCCACTTCA
GTGGACGCCCTCATTCGACGACTGTCTTCGCGTATTCGAAGAAGAAAAAG
AATCAGACAATGACACCCTGCTGGTGCAGCTTGTCAAACTACGCCTCATC
ACAGGAAAGGTGATGGAGGCACCAGGGACAGAGCCAAGTGACACCCAAAT
CCTGCGGCTATCAGCTTCAATCTATTTGCAGTCATTTCAGAAGCAAATTC
GCACATTCCGATCACAAATCCCTCTCGAACTCACCAATAACAAGATCCTG
CAAATGGAGTTATACAGCGCAGAAATGATGATCCACGAGATTGGCTTCTC
ATCAGACCCAACTATCTTTCCTCGGCAATCAAACCAACAATTTGAATGCC
TATGTGCCTGCCTCCAAACCATCAAGTCATGGACCGACAACATTCTGGCC
CTGCAACCTGTAGAGTATGTCGGGCTTTCGTGCTTGATGTGTGCCAACAT
GGCGCGCAGCTTCATCAACCTCTACCGTCTCACTGTCTGTGACTATCCCG
TTTGGGACCGTAAGCTGGTGCAGGAAACGATAGACGTGTCCTGGGTACTG
GAAAGGGCGGCGCAGCGGTTCACGCAGGTCAAAGACGCGGCGGGACTCGA
TCCAGAAGGCACTCAGGAACTGGATTTCTTCATGATTATGGCAGCGAAAA
TGGAGGCCATGAAGATGTCGTGGGACACGGCGGTGATGCCAATGATGGAA
GACTCGTGGGAGCCGACTTTGGATGATCTGGACATGTTCTCTAGCGAATT
CCGCAATATGTGGAGTTGGTGAATGCCAGCCGTACGGGCCTGTACAAACT
GTGTCCGAGCAAAGACGAGATGTGCCCTCAGTGGAGCTTCCGGGACATGT
GAACGATGTGTACGCCTTCGGAAGGCTTGTCAGCCATCGCCTCCCGTGCG
CAAGCGCCGGGTAGTGGCCAAGGCCTCTGCGAAAGATGTCCAGAAGCTGG
AGGAGAAGCTGGACGGACTGTACAGTATCCTCCAGGGCCAGACGGGTCTG
CTGAACGGACCGATGCAGCCGGCCCAGGAGCCTGTAATTCCAGCACCTCA
CACGGACGAAACTGTATCGTTGCCTATTCCTCTAACACAAGATCTGTCAG
GAACAACATGTAGTCCGGCTGCTCCGTCTTTGGAACAGCCTCGGGCCACT
TCTTACGAGCCTAACGATGATGATGCCGAGCTGTATTTAGCTAGGTTCCG
CTCTGACTTTATTGACCATTTGCCCTTTCTTGACATTCCAGTATCTCAAA
GTGCCCATCAGCTGCATGAGGAGAGTCCGCTGCTGTGGCTAGCTATAATG
ACTGTTGCATCTACTCGGACCACGCAGCAGAAAGCCATGTCCAGGCAGAT
GAGAGAGGCATTTGGCCGCGAGGCGTTTGTAGAAGGCACGAGGAGTATAG
ACTTCTTGTTGTCAGTCCTGGTATATGCCACCTGGGATCGCTACTACGCC
CTTGACAAGCCGCTTTTTACTAGTTTGATGCAGTTGGCTATTGCAATTGT
ATACGACCTAGGCCTGGACAAGCCGCCGGTGCAGGACCCGAGTCTTCTGC
TTAGCTATGACCTGAAGGGACACAATCGGCCGTCCCATTACTCTCGGCTG
CCTACCATGCAGGAACGCAGAGCTTTGCTGGGTTGCTTTCTTGTGAGCTT
CACGTCGAATGTGTCCCGAAACGGCGAGCCACTTCAGTGGACGCCCTCAT
TCGACGACTGTCTTCGCGTATTCGAAGAAGAAAAAGAATCAGACAATGAC
ACCCTGCTGGTGCAGCTTGTCAAACTACGCCTCATCACAGGAAAGGTGAT
GGAGGCACCAGGGACAGAGCCAAGTGACACCCAAATCCTGCGGCTATCAG
CTTCAATCTATTTGCAGTCATTTCAGAAGCAAATTCGCACATTCCGATCA
CAAATCCCTCTCGAACTCACCAATAACAAGATCCTGCAAATGGAGTTATA
CAGCGCAGAAATGATGATCCACGAGATTGGCTTCTCATCAGACCCAACTA
TCTTTCCTCGGCAATCAAACCAACAATTTGAATGCCTATGTGCCTGCCTC
CAAACCATCAAGTCATGGACCGACAACATTCTGGCCCTGCAACCTGTAGA
GTATGTCGGGCTTTCGTGCTTGATGTGTGCCAACATGGCGCGCAGCTTCA
TCAACCTCTACCGTCTCACTGTCTGTGACTATCCCGTTTGGGACCGTAAG
CTGGTGCAGGAAACGATAGACGTGTCCTGGGTACTGGAAAGGGCGGCGCA
GCGGTTCACGCAGGTCAAAGACGCGGCGGGACTCGATCCAGAAGGCACTC
AGGAACTGGATTTCTTCATGATTATGGCAGCGAAAATGGAGGCCATGAAG
ATGTCGTGGGACACGGCGGTGATGCCAATGATGGAAGACTCGTGGGAGCC
GACTTTGGATGATCTGGACATGTTCTCTAGCGAATTCCGCAATATGTGGA
GTTGGTGAATGCCAGCCGTACGGGCCTGTACAAACTGTGTCCGAGCAAAG
ACGAGATGTGCCCTCAGTGGAGCTTCCGGGACATGTGAACGATGTGTACG
CCTTCGGAAGGCTTGTCAGCCATCGCCTCCCGTGCGCAAGCGCCGGGTAG
TGGCCAAGGCCTCTGCGAAAGATGTCCAGAAGCTGGAGGAGAAGCTGGAC
GGACTGTACAGTATCCTCCAGGGCCAGACGGGTCTGCTGAACGGACCGAT
GCAGCCGGCCCAGGAGCCTGTAATTCCAGCACCTCACACGGACGAAACTG
TATCGTTGCCTATTCCTCTAACACAAGATCTGTCAGGAACAACATGTAGT
CCGGCTGCTCCGTCTTTGGAACAGCCTCGGGCCACTTCTTACGAGCCTAA
CGATGATGATGCCGAGCTGTATTTAGCTAGGTTCCGCTCTGACTTTATTG
ACCATTTGCCCTTTCTTGACATTCCAGTATCTCAAAGTGCCCATCAGCTG
CATGAGGAGAGTCCGCTGCTGTGGCTAGCTATAATGACTGTTGCATCTAC
TCGGACCACGCAGCAGAAAGCCATGTCCAGGCAGATGAGAGAGGCATTTG
GCCGCGAGGCGTTTGTAGAAGGCACGAGGAGTATAGACTTCTTGTTGTCA
GTCCTGGTATATGCCACCTGGGATCGCTACTACGCCCTTGACAAGCCGCT
TTTTACTAGTTTGATGCAGTTGGCTATTGCAATTGTATACGACCTAGGCC
TGGACAAGCCGCCGGTGCAGGACCCGAGTCTTCTGCTTAGCTATGACCTG
AAGGGACACAATCGGCCGTCCCATTACTCTCGGCTGCCTACCATGCAGGA
ACGCAGAGCTTTGCTGGGTTGCTTTCTTGTGAGCTTCACGTCGAATGTGT
CCCGAAACGGCGAGCCACTTCAGTGGACGCCCTCATTCGACGACTGTCTT
CGCGTATTCGAAGAAGAAAAAGAATCAGACAATGACACCCTGCTGGTGCA
GCTTGTCAAACTACGCCTCATCACAGGAAAGGTGATGGAGGCACCAGGGA
CAGAGCCAAGTGACACCCAAATCCTGCGGCTATCAGCTTCAATCTATTTG
CAGTCATTTCAGAAGCAAATTCGCACATTCCGATCACAAATCCCTCTCGA
ACTCACCAATAACAAGATCCTGCAAATGGAGTTATACAGCGCAGAAATGA
TGATCCACGAGATTGGCTTCTCATCAGACCCAACTATCTTTCCTCGGCAA
TCAAACCAACAATTTGAATGCCTATGTGCCTGCCTCCAAACCATCAAGTC
ATGGACCGACAACATTCTGGCCCTGCAACCTGTAGAGTATGTCGGGCTTT
CGTGCTTGATGTGTGCCAACATGGCGCGCAGCTTCATCAACCTCTACCGT
CTCACTGTCTGTGACTATCCCGTTTGGGACCGTAAGCTGGTGCAGGAAAC
GATAGACGTGTCCTGGGTACTGGAAAGGGCGGCGCAGCGGTTCACGCAGG
TCAAAGACGCGGCGGGACTCGATCCAGAAGGCACTCAGGAACTGGATTTC
TTCATGATTATGGCAGCGAAAATGGAGGCCATGAAGATGTCGTGGGACAC
GGCGGTGATGCCAATGATGGAAGACTCGTGGGAGCCGACTTTGGATGATC
TGGACATGTTCTCTAGCGAATTCCGCAATATGTGGAGTTGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:188915..190738 + |
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