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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:215758..217450- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010564-T1 ID=CBS51388_010564-T1|Name=CBS51388_010564-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1693bp|location=Sequence derived from alignment at An17:215758..217450- (Aspergillus niger CBS 513.88)
ATGGCTGCCATCTTCCGTTCCAGCTTGAGACTTCGCCCGACGACGCGCCT
GTCGGCCGTCCGCACCCTCACCACTACTCCGCACATGCGCGCTGCGGAGA
AGCCTTATTTCCCCGATGAGCCATCCGCTCCCAAGCTGGCCACGGCCATT
CCTGGCCCCAACAACAAGGCGGCTGCTGCGAAGCTCGACAAGGTCTTTGA
CGTCCGCAGCTTGAACATGCTCGCGGACTACTACAAGTCCAACGGTAACT
AGCAAGTCAACCTGCATTTATCTCACCCCTTGCGGGCAAGACCGCCGAAC
GAGCACTAACTTTGACACAGCATTGCCGATCTGGACGGAAACGTGCTTCT
AGATGTGTAAGCTACTACAATTAGCCTGTGGTTATTTTGCGAGAATGCGC
TCGAATGGTTTCTAACATATATTGTCCTCAGCTATGCTCAGATTGCCTCT
ATCCCCGTCGGCTACAACAACCCCCACCTCCGCAAGGTGGCAGAATCTCC
GGAGATGGTCAATGCTTTGATCAACAGACCGGCTCTGGGTAACTTCCCCT
CTCACGACTGGGCTGACATCCTGGACACTGGTATCCTCAAGGCCGCCCCC
AAGGGCCTTAACCAGGTGTTTACCGCCCTGGCTGGCTCGGATGCCAACGA
GACTGCCTACAAGGCTGCCTTTATGTACTACCGTCAGCGCGAGCGTGGTG
GCGCTGAGACCGAGTTCACCGAAGAGGAGCTGGAGACCACCATGAAGAAC
CAGTCCCCTGGTTCCCCTCAGCTGTCCATCATGTCCTTCAAGTCGGCGTT
CCACGGTCGCCTGTTCGGCAGTCTGTCTACCACTCGCAGCAAGCCCATCC
ACAAGCTGGATATCCCCGCCTTTGACTGGCCCCAGGCTCCTTTCCCCTCC
CTGAAGTACCCCTTGGAGGAGCACGCCCAGGAGAACGCCCAGGAAGAGCA
GCGTTGCCTGCAGGAGACCGAGCGTCTGATCAAGGAGTGGCACAACCCCG
TCGCTGCGGTCGTTGTCGAGCCCATCCAGTCGGAGGGTGGTGACAACCAC
GCCTCCCCGGCCTTCTTCCGTGGCCTGCGTGAGATTACCAAGCGCAACAA
CGTCCTCTTCATTGTCGATGAGGTGCAGACTGGTGTGGGTGCCACCGGCA
AGTTCTGGGCCCACGACCACTGGAACCTGGAGACTCCCCCTGACATGGTG
ACCTTCTCCAAGAAGGCCCAGACTGCCGGTTACTACTATGGCAACCCGGC
TCTGCGTCCCAACAAGCCTTACCGTCAGTTCAACACCTGGATGGGTGACC
CGGCTCGTGCTCTGATCTTCCGTGGCATCATCGAGGAGATTGAGCGCCTG
AACCTGGTGGAGAATACTGCTGCCACCGGTGACTACCTCTTCTCCGGCCT
GGAGCGTCTCGCCAAGCAGTACCCCGAGCACCTGCAGAACCTGCGTGGTA
AGGGCCAGGGAACCTTCATTGCCTGGGATACCCCCAAGCGTGACGAGTTC
CTGGTCAAGGCCAAGGGCGTTGGCGTCAACATTGGTGGTAGCGGCCAGAG
CGCCGTCCGCCTGAGGCCCATGCTGGTCTTCCAGAAGCACCATGGTAAGT
CGGCCCTAGATTCGGGTTAACAAGATAAGACACTAACATGTTGCAGCTGA
TATCCTCCTGGAGAGCGTTGAGAAGATCATTAAGCAGCTGTAA back to topCoding sequence (CDS) from alignment at An17:215758..217450- >CBS51388_010564-T1 ID=CBS51388_010564-T1|Name=CBS51388_010564-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5988bp|location=Sequence derived from alignment at An17:215758..217450- (Aspergillus niger CBS 513.88)
CTGATATCCTCCTGGAGAGCGTTGAGAAGATCATTAAGCAGCTGTAACTA
TGCTCAGATTGCCTCTATCCCCGTCGGCTACAACAACCCCCACCTCCGCA
AGGTGGCAGAATCTCCGGAGATGGTCAATGCTTTGATCAACAGACCGGCT
CTGGGTAACTTCCCCTCTCACGACTGGGCTGACATCCTGGACACTGGTAT
CCTCAAGGCCGCCCCCAAGGGCCTTAACCAGGTGTTTACCGCCCTGGCTG
GCTCGGATGCCAACGAGACTGCCTACAAGGCTGCCTTTATGTACTACCGT
CAGCGCGAGCGTGGTGGCGCTGAGACCGAGTTCACCGAAGAGGAGCTGGA
GACCACCATGAAGAACCAGTCCCCTGGTTCCCCTCAGCTGTCCATCATGT
CCTTCAAGTCGGCGTTCCACGGTCGCCTGTTCGGCAGTCTGTCTACCACT
CGCAGCAAGCCCATCCACAAGCTGGATATCCCCGCCTTTGACTGGCCCCA
GGCTCCTTTCCCCTCCCTGAAGTACCCCTTGGAGGAGCACGCCCAGGAGA
ACGCCCAGGAAGAGCAGCGTTGCCTGCAGGAGACCGAGCGTCTGATCAAG
GAGTGGCACAACCCCGTCGCTGCGGTCGTTGTCGAGCCCATCCAGTCGGA
GGGTGGTGACAACCACGCCTCCCCGGCCTTCTTCCGTGGCCTGCGTGAGA
TTACCAAGCGCAACAACGTCCTCTTCATTGTCGATGAGGTGCAGACTGGT
GTGGGTGCCACCGGCAAGTTCTGGGCCCACGACCACTGGAACCTGGAGAC
TCCCCCTGACATGGTGACCTTCTCCAAGAAGGCCCAGACTGCCGGTTACT
ACTATGGCAACCCGGCTCTGCGTCCCAACAAGCCTTACCGTCAGTTCAAC
ACCTGGATGGGTGACCCGGCTCGTGCTCTGATCTTCCGTGGCATCATCGA
GGAGATTGAGCGCCTGAACCTGGTGGAGAATACTGCTGCCACCGGTGACT
ACCTCTTCTCCGGCCTGGAGCGTCTCGCCAAGCAGTACCCCGAGCACCTG
CAGAACCTGCGTGGTAAGGGCCAGGGAACCTTCATTGCCTGGGATACCCC
CAAGCGTGACGAGTTCCTGGTCAAGGCCAAGGGCGTTGGCGTCAACATTG
GTGGTAGCGGCCAGAGCGCCGTCCGCCTGAGGCCCATGCTGGTCTTCCAG
AAGCACCATGCATTGCCGATCTGGACGGAAACGTGCTTCTAGATGTATGG
CTGCCATCTTCCGTTCCAGCTTGAGACTTCGCCCGACGACGCGCCTGTCG
GCCGTCCGCACCCTCACCACTACTCCGCACATGCGCGCTGCGGAGAAGCC
TTATTTCCCCGATGAGCCATCCGCTCCCAAGCTGGCCACGGCCATTCCTG
GCCCCAACAACAAGGCGGCTGCTGCGAAGCTCGACAAGGTCTTTGACGTC
CGCAGCTTGAACATGCTCGCGGACTACTACAAGTCCAACGGTAACTACTG
ATATCCTCCTGGAGAGCGTTGAGAAGATCATTAAGCAGCTGTAACTATGC
TCAGATTGCCTCTATCCCCGTCGGCTACAACAACCCCCACCTCCGCAAGG
TGGCAGAATCTCCGGAGATGGTCAATGCTTTGATCAACAGACCGGCTCTG
GGTAACTTCCCCTCTCACGACTGGGCTGACATCCTGGACACTGGTATCCT
CAAGGCCGCCCCCAAGGGCCTTAACCAGGTGTTTACCGCCCTGGCTGGCT
CGGATGCCAACGAGACTGCCTACAAGGCTGCCTTTATGTACTACCGTCAG
CGCGAGCGTGGTGGCGCTGAGACCGAGTTCACCGAAGAGGAGCTGGAGAC
CACCATGAAGAACCAGTCCCCTGGTTCCCCTCAGCTGTCCATCATGTCCT
TCAAGTCGGCGTTCCACGGTCGCCTGTTCGGCAGTCTGTCTACCACTCGC
AGCAAGCCCATCCACAAGCTGGATATCCCCGCCTTTGACTGGCCCCAGGC
TCCTTTCCCCTCCCTGAAGTACCCCTTGGAGGAGCACGCCCAGGAGAACG
CCCAGGAAGAGCAGCGTTGCCTGCAGGAGACCGAGCGTCTGATCAAGGAG
TGGCACAACCCCGTCGCTGCGGTCGTTGTCGAGCCCATCCAGTCGGAGGG
TGGTGACAACCACGCCTCCCCGGCCTTCTTCCGTGGCCTGCGTGAGATTA
CCAAGCGCAACAACGTCCTCTTCATTGTCGATGAGGTGCAGACTGGTGTG
GGTGCCACCGGCAAGTTCTGGGCCCACGACCACTGGAACCTGGAGACTCC
CCCTGACATGGTGACCTTCTCCAAGAAGGCCCAGACTGCCGGTTACTACT
ATGGCAACCCGGCTCTGCGTCCCAACAAGCCTTACCGTCAGTTCAACACC
TGGATGGGTGACCCGGCTCGTGCTCTGATCTTCCGTGGCATCATCGAGGA
GATTGAGCGCCTGAACCTGGTGGAGAATACTGCTGCCACCGGTGACTACC
TCTTCTCCGGCCTGGAGCGTCTCGCCAAGCAGTACCCCGAGCACCTGCAG
AACCTGCGTGGTAAGGGCCAGGGAACCTTCATTGCCTGGGATACCCCCAA
GCGTGACGAGTTCCTGGTCAAGGCCAAGGGCGTTGGCGTCAACATTGGTG
GTAGCGGCCAGAGCGCCGTCCGCCTGAGGCCCATGCTGGTCTTCCAGAAG
CACCATGCATTGCCGATCTGGACGGAAACGTGCTTCTAGATGTATGGCTG
CCATCTTCCGTTCCAGCTTGAGACTTCGCCCGACGACGCGCCTGTCGGCC
GTCCGCACCCTCACCACTACTCCGCACATGCGCGCTGCGGAGAAGCCTTA
TTTCCCCGATGAGCCATCCGCTCCCAAGCTGGCCACGGCCATTCCTGGCC
CCAACAACAAGGCGGCTGCTGCGAAGCTCGACAAGGTCTTTGACGTCCGC
AGCTTGAACATGCTCGCGGACTACTACAAGTCCAACGGTAACTACTGATA
TCCTCCTGGAGAGCGTTGAGAAGATCATTAAGCAGCTGTAACTATGCTCA
GATTGCCTCTATCCCCGTCGGCTACAACAACCCCCACCTCCGCAAGGTGG
CAGAATCTCCGGAGATGGTCAATGCTTTGATCAACAGACCGGCTCTGGGT
AACTTCCCCTCTCACGACTGGGCTGACATCCTGGACACTGGTATCCTCAA
GGCCGCCCCCAAGGGCCTTAACCAGGTGTTTACCGCCCTGGCTGGCTCGG
ATGCCAACGAGACTGCCTACAAGGCTGCCTTTATGTACTACCGTCAGCGC
GAGCGTGGTGGCGCTGAGACCGAGTTCACCGAAGAGGAGCTGGAGACCAC
CATGAAGAACCAGTCCCCTGGTTCCCCTCAGCTGTCCATCATGTCCTTCA
AGTCGGCGTTCCACGGTCGCCTGTTCGGCAGTCTGTCTACCACTCGCAGC
AAGCCCATCCACAAGCTGGATATCCCCGCCTTTGACTGGCCCCAGGCTCC
TTTCCCCTCCCTGAAGTACCCCTTGGAGGAGCACGCCCAGGAGAACGCCC
AGGAAGAGCAGCGTTGCCTGCAGGAGACCGAGCGTCTGATCAAGGAGTGG
CACAACCCCGTCGCTGCGGTCGTTGTCGAGCCCATCCAGTCGGAGGGTGG
TGACAACCACGCCTCCCCGGCCTTCTTCCGTGGCCTGCGTGAGATTACCA
AGCGCAACAACGTCCTCTTCATTGTCGATGAGGTGCAGACTGGTGTGGGT
GCCACCGGCAAGTTCTGGGCCCACGACCACTGGAACCTGGAGACTCCCCC
TGACATGGTGACCTTCTCCAAGAAGGCCCAGACTGCCGGTTACTACTATG
GCAACCCGGCTCTGCGTCCCAACAAGCCTTACCGTCAGTTCAACACCTGG
ATGGGTGACCCGGCTCGTGCTCTGATCTTCCGTGGCATCATCGAGGAGAT
TGAGCGCCTGAACCTGGTGGAGAATACTGCTGCCACCGGTGACTACCTCT
TCTCCGGCCTGGAGCGTCTCGCCAAGCAGTACCCCGAGCACCTGCAGAAC
CTGCGTGGTAAGGGCCAGGGAACCTTCATTGCCTGGGATACCCCCAAGCG
TGACGAGTTCCTGGTCAAGGCCAAGGGCGTTGGCGTCAACATTGGTGGTA
GCGGCCAGAGCGCCGTCCGCCTGAGGCCCATGCTGGTCTTCCAGAAGCAC
CATGCATTGCCGATCTGGACGGAAACGTGCTTCTAGATGTATGGCTGCCA
TCTTCCGTTCCAGCTTGAGACTTCGCCCGACGACGCGCCTGTCGGCCGTC
CGCACCCTCACCACTACTCCGCACATGCGCGCTGCGGAGAAGCCTTATTT
CCCCGATGAGCCATCCGCTCCCAAGCTGGCCACGGCCATTCCTGGCCCCA
ACAACAAGGCGGCTGCTGCGAAGCTCGACAAGGTCTTTGACGTCCGCAGC
TTGAACATGCTCGCGGACTACTACAAGTCCAACGGTAACTACTGATATCC
TCCTGGAGAGCGTTGAGAAGATCATTAAGCAGCTGTAACTATGCTCAGAT
TGCCTCTATCCCCGTCGGCTACAACAACCCCCACCTCCGCAAGGTGGCAG
AATCTCCGGAGATGGTCAATGCTTTGATCAACAGACCGGCTCTGGGTAAC
TTCCCCTCTCACGACTGGGCTGACATCCTGGACACTGGTATCCTCAAGGC
CGCCCCCAAGGGCCTTAACCAGGTGTTTACCGCCCTGGCTGGCTCGGATG
CCAACGAGACTGCCTACAAGGCTGCCTTTATGTACTACCGTCAGCGCGAG
CGTGGTGGCGCTGAGACCGAGTTCACCGAAGAGGAGCTGGAGACCACCAT
GAAGAACCAGTCCCCTGGTTCCCCTCAGCTGTCCATCATGTCCTTCAAGT
CGGCGTTCCACGGTCGCCTGTTCGGCAGTCTGTCTACCACTCGCAGCAAG
CCCATCCACAAGCTGGATATCCCCGCCTTTGACTGGCCCCAGGCTCCTTT
CCCCTCCCTGAAGTACCCCTTGGAGGAGCACGCCCAGGAGAACGCCCAGG
AAGAGCAGCGTTGCCTGCAGGAGACCGAGCGTCTGATCAAGGAGTGGCAC
AACCCCGTCGCTGCGGTCGTTGTCGAGCCCATCCAGTCGGAGGGTGGTGA
CAACCACGCCTCCCCGGCCTTCTTCCGTGGCCTGCGTGAGATTACCAAGC
GCAACAACGTCCTCTTCATTGTCGATGAGGTGCAGACTGGTGTGGGTGCC
ACCGGCAAGTTCTGGGCCCACGACCACTGGAACCTGGAGACTCCCCCTGA
CATGGTGACCTTCTCCAAGAAGGCCCAGACTGCCGGTTACTACTATGGCA
ACCCGGCTCTGCGTCCCAACAAGCCTTACCGTCAGTTCAACACCTGGATG
GGTGACCCGGCTCGTGCTCTGATCTTCCGTGGCATCATCGAGGAGATTGA
GCGCCTGAACCTGGTGGAGAATACTGCTGCCACCGGTGACTACCTCTTCT
CCGGCCTGGAGCGTCTCGCCAAGCAGTACCCCGAGCACCTGCAGAACCTG
CGTGGTAAGGGCCAGGGAACCTTCATTGCCTGGGATACCCCCAAGCGTGA
CGAGTTCCTGGTCAAGGCCAAGGGCGTTGGCGTCAACATTGGTGGTAGCG
GCCAGAGCGCCGTCCGCCTGAGGCCCATGCTGGTCTTCCAGAAGCACCAT
GCATTGCCGATCTGGACGGAAACGTGCTTCTAGATGTATGGCTGCCATCT
TCCGTTCCAGCTTGAGACTTCGCCCGACGACGCGCCTGTCGGCCGTCCGC
ACCCTCACCACTACTCCGCACATGCGCGCTGCGGAGAAGCCTTATTTCCC
CGATGAGCCATCCGCTCCCAAGCTGGCCACGGCCATTCCTGGCCCCAACA
ACAAGGCGGCTGCTGCGAAGCTCGACAAGGTCTTTGACGTCCGCAGCTTG
AACATGCTCGCGGACTACTACAAGTCCAACGGTAACTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009448 | gamma-aminobutyric acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030170 | pyridoxal phosphate binding |
| GO:0008483 | transaminase activity |
| GO:0003867 | 4-aminobutyrate transaminase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR005814 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR004631 |
| DBxref | InterPro:IPR015421 |
| DBxref | PFAM:PF00202 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:215758..217450 - |
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