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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:347422..349057+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010605-T1 ID=CBS51388_010605-T1|Name=CBS51388_010605-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1636bp|location=Sequence derived from alignment at An17:347422..349057+ (Aspergillus niger CBS 513.88)
ATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCA
TGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGC
TGGCCTCCAGCGTCGTCGAGGATGATAGCGAACTAGCTCCGGTGATCAGT
ATGCTGCACCTTTTCACACATTAACTTTCTTACCTTCACGGCATATTCAT
ATGAAATGGGAAAGGTCTAATATAATCCACTGCAGTCACTACTCCCGGTC
TCAACGCCCCGCGCAATCTCCGCCTCAACCCATACCTCAAGACCCGCAGC
AAAACCTCCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCATCGGAATT
GCTGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGGTCGCGAGG
CCGAGGAGGATGCCGACTCCCAACTGAAGCACTACGTCGCGGTCGTGGAC
CCGGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATGACTCTGCG
TGGCGCCGTTCGCAAGATGGGAGCCATTGAAGAAGAGGAAGAGGAGGAGA
GTGACGAGGAAGAAATGGTACGCTCAATCCTCTCCTCTACGCTCTTCACT
CGGACTATAAGCTGACCCTTCACCCTTCAAATAGAAAACTATGCGCGCTC
AAAGAACAGAGCTCACCAACACCTTCGGTACCAAACAATCCCGCAAGGCC
GCTCAATCGCTTGCCGAAAACGCCCAGCTCTCCAACGTGCCCTCAGGCGC
CGCCTCCGCCGCTGAAACCGCCATTCTGGGCGCAATGCCCGCCGACGCAG
CCACAGATATCGCCTCCAAGACCGCCGCCCTGCAAGCGCAGGTTCAAGCC
GCGAAGCCTCTGCCCCAGGCTAACCTGGACGCCGCGCACCCGTCAGAAGT
CTACCCACTTGATGTCCTCGTCCCCAACGGCCTGGCCACTCTGCGCCAAC
TTCCCAACATCAAAGAATGGCAAGACAGCGTTAACTCCGGCGCCGCCGTC
AACACCACCTCGCGGTACGTCTCCCGCCGCGTCGAAGCCGTCGCCCTCTC
CGGAAACACCACCCACCTCCAAATCCTCCGCTTCATCCTCCTCCTCCTGG
AACTCGCCCGCGGTCTCCGTCCCGGCCGCGACAAGTCCGCCGGCCCAGGC
AGCAAGCGTCTTCCTCCCCGCGAAGACCTCCGCCGCATCCTCTCCGGTGG
AACAACCAGCGAGAACTCCGCCAGCGGCGAACAGCTCGCGGACCCCGTCA
TCGACGCCGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAG
AACGACATCACCTTCCTCCACACTACCATCTGCGCCCTGTCGCTGCACAT
CCCACCCCAACCTTCCAAGGATGGCGGCAATAGCTCCGCCGGCGGAAACG
CCCCCAACGAGCTGGCCACCGATCCCTCGGATCTCCGTGATGATCTGCGC
CTGGATAACGTCGCTATCACGCAGTACTTCCGCGAGTTGGGCTGCCGCGT
CGACAAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGTGGTA
AGGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGTTGAG
TTCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGTAG back to topCoding sequence (CDS) from alignment at An17:347422..349057+ >CBS51388_010605-T1 ID=CBS51388_010605-T1|Name=CBS51388_010605-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4446bp|location=Sequence derived from alignment at An17:347422..349057+ (Aspergillus niger CBS 513.88)
ATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCA
TGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGC
TGGCCTCCAGCGTCGTCGAGGATGATAGCGAACTAGCTCCGGTGATCATC
ACTACTCCCGGTCTCAACGCCCCGCGCAATCTCCGCCTCAACCCATACCT
CAAGACCCGCAGCAAAACCTCCTCCTCGTCGTCACGGAACAAGGGCATCG
TCTCATCGGAATTGCTGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTC
GTGGGTCGCGAGGCCGAGGAGGATGCCGACTCCCAACTGAAGCACTACGT
CGCGGTCGTGGACCCGGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGA
AGATGACTCTGCGTGGCGCCGTTCGCAAGATGGGAGCCATTGAAGAAGAG
GAAGAGGAGGAGAGTGACGAGGAAGAAATGAAAACTATGCGCGCTCAAAG
AACAGAGCTCACCAACACCTTCGGTACCAAACAATCCCGCAAGGCCGCTC
AATCGCTTGCCGAAAACGCCCAGCTCTCCAACGTGCCCTCAGGCGCCGCC
TCCGCCGCTGAAACCGCCATTCTGGGCGCAATGCCCGCCGACGCAGCCAC
AGATATCGCCTCCAAGACCGCCGCCCTGCAAGCGCAGGTTCAAGCCGCGA
AGCCTCTGCCCCAGGCTAACCTGGACGCCGCGCACCCGTCAGAAGTCTAC
CCACTTGATGTCCTCGTCCCCAACGGCCTGGCCACTCTGCGCCAACTTCC
CAACATCAAAGAATGGCAAGACAGCGTTAACTCCGGCGCCGCCGTCAACA
CCACCTCGCGGTACGTCTCCCGCCGCGTCGAAGCCGTCGCCCTCTCCGGA
AACACCACCCACCTCCAAATCCTCCGCTTCATCCTCCTCCTCCTGGAACT
CGCCCGCGGTCTCCGTCCCGGCCGCGACAAGTCCGCCGGCCCAGGCAGCA
AGCGTCTTCCTCCCCGCGAAGACCTCCGCCGCATCCTCTCCGGTGGAACA
ACCAGCGAGAACTCCGCCAGCGGCGAACAGCTCGCGGACCCCGTCATCGA
CGCCGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAGAACG
ACATCACCTTCCTCCACACTACCATCTGCGCCCTGTCGCTGCACATCCCA
CCCCAACCTTCCAAGGATGGCGGCAATAGCTCCGCCGGCGGAAACGCCCC
CAACGAGCTGGCCACCGATCCCTCGGATCTCCGTGATGATCTGCGCCTGG
ATAACGTCGCTATCACGCAGTACTTCCGCGAGTTGGGCTGCCGCGTCGAC
AAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGTGGTAAGGC
TGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGTTGAGTTCC
CGAAGGTTAGTCGTGGTGGTGGACGGAGGTAGATGCCGTCCGATAAGGTT
GAAAAGAAGCGCAAGCGCGCTTCCGATCGCCATGAGAGGCCCAGCAAGAA
GCCCGCGCTTGAGCTGCAAGATCTGCCTCCGCTGGCCTCCAGCGTCGTCG
AGGATGATAGCGAACTAGCTCCGGTGATCATCACTACTCCCGGTCTCAAC
GCCCCGCGCAATCTCCGCCTCAACCCATACCTCAAGACCCGCAGCAAAAC
CTCCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCATCGGAATTGCTGC
TACAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGGTCGCGAGGCCGAG
GAGGATGCCGACTCCCAACTGAAGCACTACGTCGCGGTCGTGGACCCGGA
GAACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATGACTCTGCGTGGCG
CCGTTCGCAAGATGGGAGCCATTGAAGAAGAGGAAGAGGAGGAGAGTGAC
GAGGAAGAAATGAAAACTATGCGCGCTCAAAGAACAGAGCTCACCAACAC
CTTCGGTACCAAACAATCCCGCAAGGCCGCTCAATCGCTTGCCGAAAACG
CCCAGCTCTCCAACGTGCCCTCAGGCGCCGCCTCCGCCGCTGAAACCGCC
ATTCTGGGCGCAATGCCCGCCGACGCAGCCACAGATATCGCCTCCAAGAC
CGCCGCCCTGCAAGCGCAGGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTA
ACCTGGACGCCGCGCACCCGTCAGAAGTCTACCCACTTGATGTCCTCGTC
CCCAACGGCCTGGCCACTCTGCGCCAACTTCCCAACATCAAAGAATGGCA
AGACAGCGTTAACTCCGGCGCCGCCGTCAACACCACCTCGCGGTACGTCT
CCCGCCGCGTCGAAGCCGTCGCCCTCTCCGGAAACACCACCCACCTCCAA
ATCCTCCGCTTCATCCTCCTCCTCCTGGAACTCGCCCGCGGTCTCCGTCC
CGGCCGCGACAAGTCCGCCGGCCCAGGCAGCAAGCGTCTTCCTCCCCGCG
AAGACCTCCGCCGCATCCTCTCCGGTGGAACAACCAGCGAGAACTCCGCC
AGCGGCGAACAGCTCGCGGACCCCGTCATCGACGCCGTGCGCCGCAAGTT
CGCGCCCCAGGGTGCTTCCCTCTCCAAGAACGACATCACCTTCCTCCACA
CTACCATCTGCGCCCTGTCGCTGCACATCCCACCCCAACCTTCCAAGGAT
GGCGGCAATAGCTCCGCCGGCGGAAACGCCCCCAACGAGCTGGCCACCGA
TCCCTCGGATCTCCGTGATGATCTGCGCCTGGATAACGTCGCTATCACGC
AGTACTTCCGCGAGTTGGGCTGCCGCGTCGACAAGCCCCGCGAGTCGGAG
TTTGCTAAATGGGGTATCAAGGGTGGTAAGGCTGAGGCTGCGGCTAGACG
GGTTGCTAGGTTGAAGATTCCAGTTGAGTTCCCGAAGGTTAGTCGTGGTG
GTGGACGGAGGTAGATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGCGC
GCTTCCGATCGCCATGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTGCA
AGATCTGCCTCCGCTGGCCTCCAGCGTCGTCGAGGATGATAGCGAACTAG
CTCCGGTGATCATCACTACTCCCGGTCTCAACGCCCCGCGCAATCTCCGC
CTCAACCCATACCTCAAGACCCGCAGCAAAACCTCCTCCTCGTCGTCACG
GAACAAGGGCATCGTCTCATCGGAATTGCTGCTACAGTCCTCCGAGCACC
CCAAGCTGGACTTCGTGGGTCGCGAGGCCGAGGAGGATGCCGACTCCCAA
CTGAAGCACTACGTCGCGGTCGTGGACCCGGAGAACAAAACCTGGCAGTT
CATCGAAGTGCGGAAGATGACTCTGCGTGGCGCCGTTCGCAAGATGGGAG
CCATTGAAGAAGAGGAAGAGGAGGAGAGTGACGAGGAAGAAATGAAAACT
ATGCGCGCTCAAAGAACAGAGCTCACCAACACCTTCGGTACCAAACAATC
CCGCAAGGCCGCTCAATCGCTTGCCGAAAACGCCCAGCTCTCCAACGTGC
CCTCAGGCGCCGCCTCCGCCGCTGAAACCGCCATTCTGGGCGCAATGCCC
GCCGACGCAGCCACAGATATCGCCTCCAAGACCGCCGCCCTGCAAGCGCA
GGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTAACCTGGACGCCGCGCACC
CGTCAGAAGTCTACCCACTTGATGTCCTCGTCCCCAACGGCCTGGCCACT
CTGCGCCAACTTCCCAACATCAAAGAATGGCAAGACAGCGTTAACTCCGG
CGCCGCCGTCAACACCACCTCGCGGTACGTCTCCCGCCGCGTCGAAGCCG
TCGCCCTCTCCGGAAACACCACCCACCTCCAAATCCTCCGCTTCATCCTC
CTCCTCCTGGAACTCGCCCGCGGTCTCCGTCCCGGCCGCGACAAGTCCGC
CGGCCCAGGCAGCAAGCGTCTTCCTCCCCGCGAAGACCTCCGCCGCATCC
TCTCCGGTGGAACAACCAGCGAGAACTCCGCCAGCGGCGAACAGCTCGCG
GACCCCGTCATCGACGCCGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTC
CCTCTCCAAGAACGACATCACCTTCCTCCACACTACCATCTGCGCCCTGT
CGCTGCACATCCCACCCCAACCTTCCAAGGATGGCGGCAATAGCTCCGCC
GGCGGAAACGCCCCCAACGAGCTGGCCACCGATCCCTCGGATCTCCGTGA
TGATCTGCGCCTGGATAACGTCGCTATCACGCAGTACTTCCGCGAGTTGG
GCTGCCGCGTCGACAAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATC
AAGGGTGGTAAGGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGAT
TCCAGTTGAGTTCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262BVA |
| DBxref | InterPro:IPR009668 |
| DBxref | PFAM:PF06870 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:347422..349057 + |
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