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CBS51388_010614-T1, CBS51388_010614-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010614-T1
Unique NameCBS51388_010614-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An17:387277..388312+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010614-T1 ID=CBS51388_010614-T1|Name=CBS51388_010614-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1036bp|location=Sequence derived from alignment at An17:387277..388312+ (Aspergillus niger CBS 513.88)
ATGACCAAATTTCGTCCCTGCATTGATCTACACTCCGGCCAGGTGAAGCA
GATAGTGGGCGGCACGTTGAGCAGTGTTGCAGCGGACCTGAAGACGAATT
ATGTGTCGAAGTTGCCGGCCAGCCACTATGCGGAATTGTACAGGAAAAAT
GATTTGAGGGGTGGGCATGTTGTTATGCTTGGGCCCGGGAACGATGAGGC
TGCCAAGGAGGCGTTGAAGACTTGGCCTGCTGGGTTGCAGGTTGCGGGGG
GGATTACGGATAAGAATGCGAAGTATTGGATTGACATGGGAGCTGAGAAG
GTTAGTTGTTTCTTCTAGGTTTTGTTCTGTTGGTGTGTATGGATGGATGG
GGGACGGGCGGGGGTTGGGTTGTTGGGTATTGCTTTGGCTTGGTGGTTGT
GTGGTTGTTGCGCAGTATGATGGCTGATGTTGCAATTGCAGGTTATTATC
ACATCGTTCCTCTTCCCGGAGGGCAAATTCTCCCTTGAGCGGCTACAGTC
CGTTCTGGCTGCGCTGGATGGTGATAGATCTAAGCTGGTCTTGGATCTGA
GCTGCAGGAAGAAGGATAATACGTGGTTTGTGGCTATGAATCGCTGGCAG
ACGATTACTGAGATGGAAATCACTCAAGGTAAGCAATTCTGGAATTGAAA
TTGATGCTTTGTTGTTGTGGTTTTGCTTGCTCTGTTGTTTACTACACATC
CTCTTTCTTGCTCTGCTGTCAGTCATTGGCTCAGTACAACTAACAGAGGC
AGAATCAATTGCACTTTTGGAGCCCTACTGTTCCGAGTTCCTCATTCACG
CTGCAGATGTCGAGGGTCTGCAACAGGGCGTTGACGAGGAGCTCGTGTCC
AAGCTGTCCCAGTGGTGCACGATCCCTATCACCTATGCCGGAGGTGCTCG
GAATCTTCAGGATCTGGAGAAGGTTCACGTCAGCAGCCAAGGGAAGGTAG
ATTTGACGATTGGAAGTGCGTTGGATATCTTTGGTGGTTCCGGGGTAACG
TTTGATGAGTGTATAGAATGGAACAAGGCGCACTAG
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Coding sequence (CDS) from alignment at An17:387277..388312+

>CBS51388_010614-T1 ID=CBS51388_010614-T1|Name=CBS51388_010614-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2313bp|location=Sequence derived from alignment at An17:387277..388312+ (Aspergillus niger CBS 513.88)
ATGACCAAATTTCGTCCCTGCATTGATCTACACTCCGGCCAGGTGAAGCA
GATAGTGGGCGGCACGTTGAGCAGTGTTGCAGCGGACCTGAAGACGAATT
ATGTGTCGAAGTTGCCGGCCAGCCACTATGCGGAATTGTACAGGAAAAAT
GATTTGAGGGGTGGGCATGTTGTTATGCTTGGGCCCGGGAACGATGAGGC
TGCCAAGGAGGCGTTGAAGACTTGGCCTGCTGGGTTGCAGGTTGCGGGGG
GGATTACGGATAAGAATGCGAAGTATTGGATTGACATGGGAGCTGAGAAG
GTTATTATCACATCGTTCCTCTTCCCGGAGGGCAAATTCTCCCTTGAGCG
GCTACAGTCCGTTCTGGCTGCGCTGGATGGTGATAGATCTAAGCTGGTCT
TGGATCTGAGCTGCAGGAAGAAGGATAATACGTGGTTTGTGGCTATGAAT
CGCTGGCAGACGATTACTGAGATGGAAATCACTCAAGAATCAATTGCACT
TTTGGAGCCCTACTGTTCCGAGTTCCTCATTCACGCTGCAGATGTCGAGG
GTCTGCAACAGGGCGTTGACGAGGAGCTCGTGTCCAAGCTGTCCCAGTGG
TGCACGATCCCTATCACCTATGCCGGAGGTGCTCGGAATCTTCAGGATCT
GGAGAAGGTTCACGTCAGCAGCCAAGGGAAGGTAGATTTGACGATTGGAA
GTGCGTTGGATATCTTTGGTGGTTCCGGGGTAACGTTTGATGAGTGTATA
GAATGGAACAAGGCGCACTAGATGACCAAATTTCGTCCCTGCATTGATCT
ACACTCCGGCCAGGTGAAGCAGATAGTGGGCGGCACGTTGAGCAGTGTTG
CAGCGGACCTGAAGACGAATTATGTGTCGAAGTTGCCGGCCAGCCACTAT
GCGGAATTGTACAGGAAAAATGATTTGAGGGGTGGGCATGTTGTTATGCT
TGGGCCCGGGAACGATGAGGCTGCCAAGGAGGCGTTGAAGACTTGGCCTG
CTGGGTTGCAGGTTGCGGGGGGGATTACGGATAAGAATGCGAAGTATTGG
ATTGACATGGGAGCTGAGAAGGTTATTATCACATCGTTCCTCTTCCCGGA
GGGCAAATTCTCCCTTGAGCGGCTACAGTCCGTTCTGGCTGCGCTGGATG
GTGATAGATCTAAGCTGGTCTTGGATCTGAGCTGCAGGAAGAAGGATAAT
ACGTGGTTTGTGGCTATGAATCGCTGGCAGACGATTACTGAGATGGAAAT
CACTCAAGAATCAATTGCACTTTTGGAGCCCTACTGTTCCGAGTTCCTCA
TTCACGCTGCAGATGTCGAGGGTCTGCAACAGGGCGTTGACGAGGAGCTC
GTGTCCAAGCTGTCCCAGTGGTGCACGATCCCTATCACCTATGCCGGAGG
TGCTCGGAATCTTCAGGATCTGGAGAAGGTTCACGTCAGCAGCCAAGGGA
AGGTAGATTTGACGATTGGAAGTGCGTTGGATATCTTTGGTGGTTCCGGG
GTAACGTTTGATGAGTGTATAGAATGGAACAAGGCGCACTAGATGACCAA
ATTTCGTCCCTGCATTGATCTACACTCCGGCCAGGTGAAGCAGATAGTGG
GCGGCACGTTGAGCAGTGTTGCAGCGGACCTGAAGACGAATTATGTGTCG
AAGTTGCCGGCCAGCCACTATGCGGAATTGTACAGGAAAAATGATTTGAG
GGGTGGGCATGTTGTTATGCTTGGGCCCGGGAACGATGAGGCTGCCAAGG
AGGCGTTGAAGACTTGGCCTGCTGGGTTGCAGGTTGCGGGGGGGATTACG
GATAAGAATGCGAAGTATTGGATTGACATGGGAGCTGAGAAGGTTATTAT
CACATCGTTCCTCTTCCCGGAGGGCAAATTCTCCCTTGAGCGGCTACAGT
CCGTTCTGGCTGCGCTGGATGGTGATAGATCTAAGCTGGTCTTGGATCTG
AGCTGCAGGAAGAAGGATAATACGTGGTTTGTGGCTATGAATCGCTGGCA
GACGATTACTGAGATGGAAATCACTCAAGAATCAATTGCACTTTTGGAGC
CCTACTGTTCCGAGTTCCTCATTCACGCTGCAGATGTCGAGGGTCTGCAA
CAGGGCGTTGACGAGGAGCTCGTGTCCAAGCTGTCCCAGTGGTGCACGAT
CCCTATCACCTATGCCGGAGGTGCTCGGAATCTTCAGGATCTGGAGAAGG
TTCACGTCAGCAGCCAAGGGAAGGTAGATTTGACGATTGGAAGTGCGTTG
GATATCTTTGGTGGTTCCGGGGTAACGTTTGATGAGTGTATAGAATGGAA
CAAGGCGCACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000105histidine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00039491-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HIS7CBS51388_010614Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010614-T1.exon1CBS51388_010614-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010614-T1.exon2CBS51388_010614-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010614-T1.exon3CBS51388_010614-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010614-T1.cdsCBS51388_010614-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010614-T1CBS51388_010614-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092640IZ
DBxrefInterPro:IPR011060
DBxrefInterPro:IPR011858
DBxrefInterPro:IPR006062
DBxrefInterPro:IPR013785
DBxrefPFAM:PF00977
ProductHistidine biosynthesis bifunctional protein hisB
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An17supercontigAn17:387277..388312 +
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