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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:537373..539114- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010659-T1 ID=CBS51388_010659-T1|Name=CBS51388_010659-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1742bp|location=Sequence derived from alignment at An17:537373..539114- (Aspergillus niger CBS 513.88)
ATGAGCGCGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAA
GGTGAAGAAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCT
CCATGATCTCTCTTATCATTCGTACGTCTTCCGTCCAGTCAACTCGTCAT
TAGAATACTTCTAATTATCGGTTCTTCTTTGCAGCCCCCAAGGATCAGAT
TTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTGTAAGTGGCTTGACTG
AGGGAGACACGGCCAGTCCAGTAAAGTTGCTAATCACATATTACAGGGCA
CTGCGTCTAACATCAAGTCTCGTGTCAACCGTCTTTCCGTCCTTTCCGCT
ATTACTTCGACGCAACAACGTCTCAAGCTCTACAATAAGGTGCCGCCGAA
TGGTCTAGTGGTTTATTGCGGTGAAATTATCACCTCTGAAGGAAAGGAGC
GCAAGATCAACATTGATTTCGAGCCTTTCAAGCCAATCAACACCTCGTTG
TATCTCTGTGATAACAAGTTCCACACTGAGGCTCTTAGTGAGCTTCTTGA
ATCCGATCAGAAGTTTGGTTTCATCGTCATGGATGGAAACGGTGCCCTGT
TCGGTACCTTGAGCGGCAACACCAGAGAAATCCTGCAAAAGTTGAGCGTT
GATCTGCCCAAGAAGCACGGCCGTGGTGGTCAGTCAGCATTGCGTTTCGC
TCGTCTTCGTGAGGAGAAGCGCCACAACTACGTACGCAAGATTGCCGAGT
TGGCTGTTCAGAACTACATCACCAATGACAAGGTCAATGTTGCAGGATTG
ATCTTGGCCGGTTCTGCCGATTTTAAAAACGACCTGAATCAGTCCGATAT
GTTCGACCAGAGATTGCAGGCTAAGGTCATCAAGGTTGTCGACGTGTCTT
ATGGTGGCGAGAACGGCTTTAACCAGGCTATCGAACTGGCATCTGAGACC
TTGAGCAACGTCAAATTTGTTCAGGAGAAGAAGCTTATCGGAAAGTATTT
CGAAGAAATCAGTCAGGATACTGGAAAGGTCTGTTATGGCATTGACGATA
CATTGAAGGCTTTGGAGCTTGGTGCGGCGGAGACACTGATCGTATATGAG
AACCTTGACGTTACCCGGCACGTTCTCAAGAGCTCCAGCGGTTCGGATGT
CGTCATCCACACTACCAAGTCACAGGAAGAGAACCGTGAACTGTTCATGG
ACAAGGAGACTGGCGCTGAGATGGAAGTGAGCGAGCAGCAGTCGTTCCTT
GAGTGGCTTGCTGAAAGCTACAAGGACTTTGGAGCAACCCTGGAGTTCGT
CTCCGACAAGTCCAGTGAAGGAAATCAGTTTGTCAAAGGTTTCGGTGGTA
TCGGAGCCATCCTTCGGTACAAGGTCAACTTTGAACAGCTTGCTGACTAC
GATGACGAGGATGAATTCTACGACGGTATGTTTAACTCAATGTCGGTGTT
ATTCGTGTGCTAACCACTCCCTATAGATTGACGGTTCAGCGGCCTCGCAG
AGAGCGAGGATGAACGGCCAGAAGATTCCAGTTCGGACCTTCTGACGGCT
CGCCCCGTGATTCGTGATGGCGGCTCTCCCGGCAACATGGCCGCAATGGT
ACACACCTTGCCGTTGCCCAGTCAATCTCCTATGAAGCTGCTTAGAAGTA
TGTGCTTCCTTATTTGTGCAACCGTGCAACTTGCTGACATCATAGCAGCA
GGGCCATCCAAGCTCCGTAACATGTTCACAGAGGTTATGTAG back to topCoding sequence (CDS) from alignment at An17:537373..539114- >CBS51388_010659-T1 ID=CBS51388_010659-T1|Name=CBS51388_010659-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7455bp|location=Sequence derived from alignment at An17:537373..539114- (Aspergillus niger CBS 513.88)
CAGGGCCATCCAAGCTCCGTAACATGTTCACAGAGGTTATGTAGAGAGCG
AGGATGAACGGCCAGAAGATTCCAGTTCGGACCTTCTGACGGCTCGCCCC
GTGATTCGTGATGGCGGCTCTCCCGGCAACATGGCCGCAATGGTACACAC
CTTGCCGTTGCCCAGTCAATCTCCTATGAAGCTGCTTAGAAGGCACTGCG
TCTAACATCAAGTCTCGTGTCAACCGTCTTTCCGTCCTTTCCGCTATTAC
TTCGACGCAACAACGTCTCAAGCTCTACAATAAGGTGCCGCCGAATGGTC
TAGTGGTTTATTGCGGTGAAATTATCACCTCTGAAGGAAAGGAGCGCAAG
ATCAACATTGATTTCGAGCCTTTCAAGCCAATCAACACCTCGTTGTATCT
CTGTGATAACAAGTTCCACACTGAGGCTCTTAGTGAGCTTCTTGAATCCG
ATCAGAAGTTTGGTTTCATCGTCATGGATGGAAACGGTGCCCTGTTCGGT
ACCTTGAGCGGCAACACCAGAGAAATCCTGCAAAAGTTGAGCGTTGATCT
GCCCAAGAAGCACGGCCGTGGTGGTCAGTCAGCATTGCGTTTCGCTCGTC
TTCGTGAGGAGAAGCGCCACAACTACGTACGCAAGATTGCCGAGTTGGCT
GTTCAGAACTACATCACCAATGACAAGGTCAATGTTGCAGGATTGATCTT
GGCCGGTTCTGCCGATTTTAAAAACGACCTGAATCAGTCCGATATGTTCG
ACCAGAGATTGCAGGCTAAGGTCATCAAGGTTGTCGACGTGTCTTATGGT
GGCGAGAACGGCTTTAACCAGGCTATCGAACTGGCATCTGAGACCTTGAG
CAACGTCAAATTTGTTCAGGAGAAGAAGCTTATCGGAAAGTATTTCGAAG
AAATCAGTCAGGATACTGGAAAGGTCTGTTATGGCATTGACGATACATTG
AAGGCTTTGGAGCTTGGTGCGGCGGAGACACTGATCGTATATGAGAACCT
TGACGTTACCCGGCACGTTCTCAAGAGCTCCAGCGGTTCGGATGTCGTCA
TCCACACTACCAAGTCACAGGAAGAGAACCGTGAACTGTTCATGGACAAG
GAGACTGGCGCTGAGATGGAAGTGAGCGAGCAGCAGTCGTTCCTTGAGTG
GCTTGCTGAAAGCTACAAGGACTTTGGAGCAACCCTGGAGTTCGTCTCCG
ACAAGTCCAGTGAAGGAAATCAGTTTGTCAAAGGTTTCGGTGGTATCGGA
GCCATCCTTCGGTACAAGGTCAACTTTGAACAGCTTGCTGACTACGATGA
CGAGGATGAATTCTACGACGCCCCCAAGGATCAGATTTCTAGAGCAGCAA
AGATGTTGGCGGAAGAGTTTATGAGCGCGGCTCAGCCGAACGAAGCGGAG
AAGAACATCGAGATATGGAAGGTGAAGAAACTCATTAAGCGGCTTGAGGC
CGCTAGAGGAAACGGAACCTCCATGATCTCTCTTATCATTCCAGGGCCAT
CCAAGCTCCGTAACATGTTCACAGAGGTTATGTAGAGAGCGAGGATGAAC
GGCCAGAAGATTCCAGTTCGGACCTTCTGACGGCTCGCCCCGTGATTCGT
GATGGCGGCTCTCCCGGCAACATGGCCGCAATGGTACACACCTTGCCGTT
GCCCAGTCAATCTCCTATGAAGCTGCTTAGAAGGCACTGCGTCTAACATC
AAGTCTCGTGTCAACCGTCTTTCCGTCCTTTCCGCTATTACTTCGACGCA
ACAACGTCTCAAGCTCTACAATAAGGTGCCGCCGAATGGTCTAGTGGTTT
ATTGCGGTGAAATTATCACCTCTGAAGGAAAGGAGCGCAAGATCAACATT
GATTTCGAGCCTTTCAAGCCAATCAACACCTCGTTGTATCTCTGTGATAA
CAAGTTCCACACTGAGGCTCTTAGTGAGCTTCTTGAATCCGATCAGAAGT
TTGGTTTCATCGTCATGGATGGAAACGGTGCCCTGTTCGGTACCTTGAGC
GGCAACACCAGAGAAATCCTGCAAAAGTTGAGCGTTGATCTGCCCAAGAA
GCACGGCCGTGGTGGTCAGTCAGCATTGCGTTTCGCTCGTCTTCGTGAGG
AGAAGCGCCACAACTACGTACGCAAGATTGCCGAGTTGGCTGTTCAGAAC
TACATCACCAATGACAAGGTCAATGTTGCAGGATTGATCTTGGCCGGTTC
TGCCGATTTTAAAAACGACCTGAATCAGTCCGATATGTTCGACCAGAGAT
TGCAGGCTAAGGTCATCAAGGTTGTCGACGTGTCTTATGGTGGCGAGAAC
GGCTTTAACCAGGCTATCGAACTGGCATCTGAGACCTTGAGCAACGTCAA
ATTTGTTCAGGAGAAGAAGCTTATCGGAAAGTATTTCGAAGAAATCAGTC
AGGATACTGGAAAGGTCTGTTATGGCATTGACGATACATTGAAGGCTTTG
GAGCTTGGTGCGGCGGAGACACTGATCGTATATGAGAACCTTGACGTTAC
CCGGCACGTTCTCAAGAGCTCCAGCGGTTCGGATGTCGTCATCCACACTA
CCAAGTCACAGGAAGAGAACCGTGAACTGTTCATGGACAAGGAGACTGGC
GCTGAGATGGAAGTGAGCGAGCAGCAGTCGTTCCTTGAGTGGCTTGCTGA
AAGCTACAAGGACTTTGGAGCAACCCTGGAGTTCGTCTCCGACAAGTCCA
GTGAAGGAAATCAGTTTGTCAAAGGTTTCGGTGGTATCGGAGCCATCCTT
CGGTACAAGGTCAACTTTGAACAGCTTGCTGACTACGATGACGAGGATGA
ATTCTACGACGCCCCCAAGGATCAGATTTCTAGAGCAGCAAAGATGTTGG
CGGAAGAGTTTATGAGCGCGGCTCAGCCGAACGAAGCGGAGAAGAACATC
GAGATATGGAAGGTGAAGAAACTCATTAAGCGGCTTGAGGCCGCTAGAGG
AAACGGAACCTCCATGATCTCTCTTATCATTCCAGGGCCATCCAAGCTCC
GTAACATGTTCACAGAGGTTATGTAGAGAGCGAGGATGAACGGCCAGAAG
ATTCCAGTTCGGACCTTCTGACGGCTCGCCCCGTGATTCGTGATGGCGGC
TCTCCCGGCAACATGGCCGCAATGGTACACACCTTGCCGTTGCCCAGTCA
ATCTCCTATGAAGCTGCTTAGAAGGCACTGCGTCTAACATCAAGTCTCGT
GTCAACCGTCTTTCCGTCCTTTCCGCTATTACTTCGACGCAACAACGTCT
CAAGCTCTACAATAAGGTGCCGCCGAATGGTCTAGTGGTTTATTGCGGTG
AAATTATCACCTCTGAAGGAAAGGAGCGCAAGATCAACATTGATTTCGAG
CCTTTCAAGCCAATCAACACCTCGTTGTATCTCTGTGATAACAAGTTCCA
CACTGAGGCTCTTAGTGAGCTTCTTGAATCCGATCAGAAGTTTGGTTTCA
TCGTCATGGATGGAAACGGTGCCCTGTTCGGTACCTTGAGCGGCAACACC
AGAGAAATCCTGCAAAAGTTGAGCGTTGATCTGCCCAAGAAGCACGGCCG
TGGTGGTCAGTCAGCATTGCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCC
ACAACTACGTACGCAAGATTGCCGAGTTGGCTGTTCAGAACTACATCACC
AATGACAAGGTCAATGTTGCAGGATTGATCTTGGCCGGTTCTGCCGATTT
TAAAAACGACCTGAATCAGTCCGATATGTTCGACCAGAGATTGCAGGCTA
AGGTCATCAAGGTTGTCGACGTGTCTTATGGTGGCGAGAACGGCTTTAAC
CAGGCTATCGAACTGGCATCTGAGACCTTGAGCAACGTCAAATTTGTTCA
GGAGAAGAAGCTTATCGGAAAGTATTTCGAAGAAATCAGTCAGGATACTG
GAAAGGTCTGTTATGGCATTGACGATACATTGAAGGCTTTGGAGCTTGGT
GCGGCGGAGACACTGATCGTATATGAGAACCTTGACGTTACCCGGCACGT
TCTCAAGAGCTCCAGCGGTTCGGATGTCGTCATCCACACTACCAAGTCAC
AGGAAGAGAACCGTGAACTGTTCATGGACAAGGAGACTGGCGCTGAGATG
GAAGTGAGCGAGCAGCAGTCGTTCCTTGAGTGGCTTGCTGAAAGCTACAA
GGACTTTGGAGCAACCCTGGAGTTCGTCTCCGACAAGTCCAGTGAAGGAA
ATCAGTTTGTCAAAGGTTTCGGTGGTATCGGAGCCATCCTTCGGTACAAG
GTCAACTTTGAACAGCTTGCTGACTACGATGACGAGGATGAATTCTACGA
CGCCCCCAAGGATCAGATTTCTAGAGCAGCAAAGATGTTGGCGGAAGAGT
TTATGAGCGCGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGG
AAGGTGAAGAAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAAC
CTCCATGATCTCTCTTATCATTCCAGGGCCATCCAAGCTCCGTAACATGT
TCACAGAGGTTATGTAGAGAGCGAGGATGAACGGCCAGAAGATTCCAGTT
CGGACCTTCTGACGGCTCGCCCCGTGATTCGTGATGGCGGCTCTCCCGGC
AACATGGCCGCAATGGTACACACCTTGCCGTTGCCCAGTCAATCTCCTAT
GAAGCTGCTTAGAAGGCACTGCGTCTAACATCAAGTCTCGTGTCAACCGT
CTTTCCGTCCTTTCCGCTATTACTTCGACGCAACAACGTCTCAAGCTCTA
CAATAAGGTGCCGCCGAATGGTCTAGTGGTTTATTGCGGTGAAATTATCA
CCTCTGAAGGAAAGGAGCGCAAGATCAACATTGATTTCGAGCCTTTCAAG
CCAATCAACACCTCGTTGTATCTCTGTGATAACAAGTTCCACACTGAGGC
TCTTAGTGAGCTTCTTGAATCCGATCAGAAGTTTGGTTTCATCGTCATGG
ATGGAAACGGTGCCCTGTTCGGTACCTTGAGCGGCAACACCAGAGAAATC
CTGCAAAAGTTGAGCGTTGATCTGCCCAAGAAGCACGGCCGTGGTGGTCA
GTCAGCATTGCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCCACAACTACG
TACGCAAGATTGCCGAGTTGGCTGTTCAGAACTACATCACCAATGACAAG
GTCAATGTTGCAGGATTGATCTTGGCCGGTTCTGCCGATTTTAAAAACGA
CCTGAATCAGTCCGATATGTTCGACCAGAGATTGCAGGCTAAGGTCATCA
AGGTTGTCGACGTGTCTTATGGTGGCGAGAACGGCTTTAACCAGGCTATC
GAACTGGCATCTGAGACCTTGAGCAACGTCAAATTTGTTCAGGAGAAGAA
GCTTATCGGAAAGTATTTCGAAGAAATCAGTCAGGATACTGGAAAGGTCT
GTTATGGCATTGACGATACATTGAAGGCTTTGGAGCTTGGTGCGGCGGAG
ACACTGATCGTATATGAGAACCTTGACGTTACCCGGCACGTTCTCAAGAG
CTCCAGCGGTTCGGATGTCGTCATCCACACTACCAAGTCACAGGAAGAGA
ACCGTGAACTGTTCATGGACAAGGAGACTGGCGCTGAGATGGAAGTGAGC
GAGCAGCAGTCGTTCCTTGAGTGGCTTGCTGAAAGCTACAAGGACTTTGG
AGCAACCCTGGAGTTCGTCTCCGACAAGTCCAGTGAAGGAAATCAGTTTG
TCAAAGGTTTCGGTGGTATCGGAGCCATCCTTCGGTACAAGGTCAACTTT
GAACAGCTTGCTGACTACGATGACGAGGATGAATTCTACGACGCCCCCAA
GGATCAGATTTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTATGAGCG
CGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAAGGTGAAG
AAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCATGAT
CTCTCTTATCATTCCAGGGCCATCCAAGCTCCGTAACATGTTCACAGAGG
TTATGTAGAGAGCGAGGATGAACGGCCAGAAGATTCCAGTTCGGACCTTC
TGACGGCTCGCCCCGTGATTCGTGATGGCGGCTCTCCCGGCAACATGGCC
GCAATGGTACACACCTTGCCGTTGCCCAGTCAATCTCCTATGAAGCTGCT
TAGAAGGCACTGCGTCTAACATCAAGTCTCGTGTCAACCGTCTTTCCGTC
CTTTCCGCTATTACTTCGACGCAACAACGTCTCAAGCTCTACAATAAGGT
GCCGCCGAATGGTCTAGTGGTTTATTGCGGTGAAATTATCACCTCTGAAG
GAAAGGAGCGCAAGATCAACATTGATTTCGAGCCTTTCAAGCCAATCAAC
ACCTCGTTGTATCTCTGTGATAACAAGTTCCACACTGAGGCTCTTAGTGA
GCTTCTTGAATCCGATCAGAAGTTTGGTTTCATCGTCATGGATGGAAACG
GTGCCCTGTTCGGTACCTTGAGCGGCAACACCAGAGAAATCCTGCAAAAG
TTGAGCGTTGATCTGCCCAAGAAGCACGGCCGTGGTGGTCAGTCAGCATT
GCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCCACAACTACGTACGCAAGA
TTGCCGAGTTGGCTGTTCAGAACTACATCACCAATGACAAGGTCAATGTT
GCAGGATTGATCTTGGCCGGTTCTGCCGATTTTAAAAACGACCTGAATCA
GTCCGATATGTTCGACCAGAGATTGCAGGCTAAGGTCATCAAGGTTGTCG
ACGTGTCTTATGGTGGCGAGAACGGCTTTAACCAGGCTATCGAACTGGCA
TCTGAGACCTTGAGCAACGTCAAATTTGTTCAGGAGAAGAAGCTTATCGG
AAAGTATTTCGAAGAAATCAGTCAGGATACTGGAAAGGTCTGTTATGGCA
TTGACGATACATTGAAGGCTTTGGAGCTTGGTGCGGCGGAGACACTGATC
GTATATGAGAACCTTGACGTTACCCGGCACGTTCTCAAGAGCTCCAGCGG
TTCGGATGTCGTCATCCACACTACCAAGTCACAGGAAGAGAACCGTGAAC
TGTTCATGGACAAGGAGACTGGCGCTGAGATGGAAGTGAGCGAGCAGCAG
TCGTTCCTTGAGTGGCTTGCTGAAAGCTACAAGGACTTTGGAGCAACCCT
GGAGTTCGTCTCCGACAAGTCCAGTGAAGGAAATCAGTTTGTCAAAGGTT
TCGGTGGTATCGGAGCCATCCTTCGGTACAAGGTCAACTTTGAACAGCTT
GCTGACTACGATGACGAGGATGAATTCTACGACGCCCCCAAGGATCAGAT
TTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTATGAGCGCGGCTCAGC
CGAACGAAGCGGAGAAGAACATCGAGATATGGAAGGTGAAGAAACTCATT
AAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCATGATCTCTCTTAT
CATTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006415 | translational termination |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003747 | translation release factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262CDO |
| DBxref | InterPro:IPR042226 |
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR024049 |
| DBxref | InterPro:IPR004403 |
| DBxref | InterPro:IPR005141 |
| DBxref | InterPro:IPR005142 |
| DBxref | InterPro:IPR005140 |
| DBxref | PFAM:PF03465 |
| DBxref | PFAM:PF03464 |
| DBxref | PFAM:PF03463 |
| DBxref | PFAM:PF18854 |
| Product | Eukaryotic peptide chain release factor subunit 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| An17 | supercontig | An17:537373..539114 - |
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