You are here

CBS51388_010660-T1, CBS51388_010660-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010660-T1
Unique NameCBS51388_010660-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An17:543058..543921-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010660-T1 ID=CBS51388_010660-T1|Name=CBS51388_010660-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=864bp|location=Sequence derived from alignment at An17:543058..543921- (Aspergillus niger CBS 513.88)
ATGGGGCCTTCTAACAAACAACTGAGAAAAAGACCTGGTCTTCTGTCCCG CACCCGTCCCCCCACTGTCCGGGCAAAGCATGCGGCCTTGTCGGCGAAAG CTACTCGAAATCTCATTCGATCACACCATCGACTACTCAAAGCGCTTGCC CAAGCTGTACGGGCCGGTGATGATGTCTTAGTTGGAAAGATCGAGGCGCA AATCCAGGAAAATGGCGGCTTGGAAAGCTACCAGCTCGCAAGCAAACTTG GCCAGTCTTTAGATCGTGGAGGCGACTCTAGCAAGGTCTTAGTTGATTGG ATAGCTCCCCGGTTACTGCCAATAGAAAATACACCCTACAAGCTCCGAGT ACTCGAGATTGGAGCTCTAAGCACAAAGAACGCTTGTTCAATGAACAGAT TACTGGACGTCACTAGGATAGATCTGAATTCTCAAGAACCGGGGATCCTG AAACAGGATTTCATGAAAAGGCCTCTTCCCCAAAATGAGTCCGATAGGTT CCATATTATCAGTCTCTCCTTGGTCCTCAATTTTGTTCCAGATGCCGCCG GTCGGGGTGAAATGTTGAAGCGCTGTATATCCTTCTTGACCACGTCGCCC CCCTCCGGTTCTTCTCTTGATATTATCCCAAGCCTGTTTCTGGTTCTCCC ACTCTCCTGCGTTACCAATTCGCGCTACCTCACCGAAAGCAGGTTGCAAG ACATAATGTCTAGTATGGGCTTTGCGTTGGCTAAGACCAAGCAGACATCC AAGCTGATATTCCAACTTTGGGATCAAGTTGGCGGCTACAACGCCAAACC CTTCAAAAAGGAAATCTTGAACCCTGGAAAAACAAGGAACAATTTTTCAA TTATCGTCAAGTGA
back to top

Coding sequence (CDS) from alignment at An17:543058..543921-

>CBS51388_010660-T1 ID=CBS51388_010660-T1|Name=CBS51388_010660-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=864bp|location=Sequence derived from alignment at An17:543058..543921- (Aspergillus niger CBS 513.88)
ATGGGGCCTTCTAACAAACAACTGAGAAAAAGACCTGGTCTTCTGTCCCG
CACCCGTCCCCCCACTGTCCGGGCAAAGCATGCGGCCTTGTCGGCGAAAG
CTACTCGAAATCTCATTCGATCACACCATCGACTACTCAAAGCGCTTGCC
CAAGCTGTACGGGCCGGTGATGATGTCTTAGTTGGAAAGATCGAGGCGCA
AATCCAGGAAAATGGCGGCTTGGAAAGCTACCAGCTCGCAAGCAAACTTG
GCCAGTCTTTAGATCGTGGAGGCGACTCTAGCAAGGTCTTAGTTGATTGG
ATAGCTCCCCGGTTACTGCCAATAGAAAATACACCCTACAAGCTCCGAGT
ACTCGAGATTGGAGCTCTAAGCACAAAGAACGCTTGTTCAATGAACAGAT
TACTGGACGTCACTAGGATAGATCTGAATTCTCAAGAACCGGGGATCCTG
AAACAGGATTTCATGAAAAGGCCTCTTCCCCAAAATGAGTCCGATAGGTT
CCATATTATCAGTCTCTCCTTGGTCCTCAATTTTGTTCCAGATGCCGCCG
GTCGGGGTGAAATGTTGAAGCGCTGTATATCCTTCTTGACCACGTCGCCC
CCCTCCGGTTCTTCTCTTGATATTATCCCAAGCCTGTTTCTGGTTCTCCC
ACTCTCCTGCGTTACCAATTCGCGCTACCTCACCGAAAGCAGGTTGCAAG
ACATAATGTCTAGTATGGGCTTTGCGTTGGCTAAGACCAAGCAGACATCC
AAGCTGATATTCCAACTTTGGGATCAAGTTGGCGGCTACAACGCCAAACC
CTTCAAAAAGGAAATCTTGAACCCTGGAAAAACAAGGAACAATTTTTCAA
TTATCGTCAAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010660CBS51388_010660Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010660-T1.cdsCBS51388_010660-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010660-T1.exon1CBS51388_010660-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010660-T1CBS51388_010660-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263PWF
DBxrefInterPro:IPR021867
DBxrefPFAM:PF11968
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An17supercontigAn17:543058..543921 -