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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:64354..65444+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010697-T1 ID=CBS51388_010697-T1|Name=CBS51388_010697-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1091bp|location=Sequence derived from alignment at An18:64354..65444+ (Aspergillus niger CBS 513.88)
ATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATGTCTCCATCAAGAG
ATCATCCCAAACTCTCGCCATTCTCGCCAGCAACGCATACATCTATGGCG
GGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGTATACCGTATGTCT
TTTGATGCTTGTAAGTCGCCATAACTTTGACCACTCGGCAAGATCTATCA
GGACCATACTTTGATTGACACAGACTAGCAACATCCAGCAACCGAAGTCT
CATACAGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGGATCCG
CCTCGACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGGGCGGT
ATCGCTATGGCCCCGATCGAGGAATTTGGCTCCTTCTGGGTCTTTGATCC
GACCCAGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTCGCAAC
ATCCTGCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAGACACT
ATCTATCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGATCTTTG
GGCCTTCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGCGCCCG
GCCCTGAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGATCTAC
CGGATGAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTGGATGT
GTATGATGTGCGGACGAATGAGTGGACCAGTCTTACTTATGCAGCGGATG
GCGTTTCCGGACCCAGTCCGCGAAGTGTCGGCTGCTTGCTTGTCACAACC
ATCGCTGGAAAGCAGTCTCTGGTAACAATGTTTGGCGAGCATGATCCAAG
TAACCTGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTGGGCAT
TTGATCTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGCCACAC
AGACCTCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCTGAAGC
ACATGCCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGAGTCAA
ATGAGCGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAG back to topCoding sequence (CDS) from alignment at An18:64354..65444+ >CBS51388_010697-T1 ID=CBS51388_010697-T1|Name=CBS51388_010697-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2046bp|location=Sequence derived from alignment at An18:64354..65444+ (Aspergillus niger CBS 513.88)
ATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATGTCTCCATCAAGAG
ATCATCCCAAACTCTCGCCATTCTCGCCAGCAACGCATACATCTATGGCG
GGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGTATACCGTATGTCT
TTTGATGCTTCAACATCCAGCAACCGAAGTCTCATACAGACTCCCCCGTC
TGCCACTCACCCCCAACCCCGCGTAGGATCCGCCTCGACCGCTCTCGCCG
GGAAACTCTATATCTTCTCTGGTCGGGGCGGTATCGCTATGGCCCCGATC
GAGGAATTTGGCTCCTTCTGGGTCTTTGATCCGACCCAGAATACCTGGTC
GCAATTGCCCCCTGCAAACTCAAACTCGCAACATCCTGCGGGCCGAAGCT
ACCACACGCTCACCAATAACGGCACAGACACTATCTATCTGCACGGTGGA
TGTCCATCGAGTGGCCGTCTACGCGATCTTTGGGCCTTCAACATCCATTC
CCGGCAATGGCTAGAGCTGCCTCCGGCGCCCGGCCCTGAACGAGGCGGTG
CGTCAATCGCGTACGCTGATCAGCGGATCTACCGGATGAACGGATTTGAC
GGAACCAGAGAGCAAGGCGGAGCTGTGGATGTGTATGATGTGCGGACGAA
TGAGTGGACCAGTCTTACTTATGCAGCGGATGGCGTTTCCGGACCCAGTC
CGCGAAGTGTCGGCTGCTTGCTTGTCACAACCATCGCTGGAAAGCAGTCT
CTGGTAACAATGTTTGGCGAGCATGATCCAAGTAACCTGGGACACCAAGG
TGCCGGGAAGATGCTAGCGGATGTGTGGGCATTTGATCTCCAATCTCAGC
GGTGGGCACAGGTGGATGTTGCGGAGCCACACAGACCTCCGGCGCGTGGC
TGGTTTGATGCGGACGTCATCGGCCCTGAAGCACATGCCAATCCTGGGAG
CATCATAGTCCACGGTGGACTTGCGGAGTCAAATGAGCGGTTGGATGATG
TGTGGCGACTGGATTTTGTCTAGATGCCGCGTGCTATCTGGACAAAAATT
CTCTCGGATGTCTCCATCAAGAGATCATCCCAAACTCTCGCCATTCTCGC
CAGCAACGCATACATCTATGGCGGGGAGCTGCGGCCAAGAGAACCAGTCG
ATTCTGCTGTATACCGTATGTCTTTTGATGCTTCAACATCCAGCAACCGA
AGTCTCATACAGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGG
ATCCGCCTCGACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGG
GCGGTATCGCTATGGCCCCGATCGAGGAATTTGGCTCCTTCTGGGTCTTT
GATCCGACCCAGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTC
GCAACATCCTGCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAG
ACACTATCTATCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGAT
CTTTGGGCCTTCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGC
GCCCGGCCCTGAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGA
TCTACCGGATGAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTG
GATGTGTATGATGTGCGGACGAATGAGTGGACCAGTCTTACTTATGCAGC
GGATGGCGTTTCCGGACCCAGTCCGCGAAGTGTCGGCTGCTTGCTTGTCA
CAACCATCGCTGGAAAGCAGTCTCTGGTAACAATGTTTGGCGAGCATGAT
CCAAGTAACCTGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTG
GGCATTTGATCTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGC
CACACAGACCTCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCT
GAAGCACATGCCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGA
GTCAAATGAGCGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015915 |
| DBxref | InterPro:IPR006652 |
| DBxref | PFAM:PF13964 |
| DBxref | PFAM:PF13418 |
| DBxref | PFAM:PF13415 |
| DBxref | PFAM:PF01344 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:64354..65444 + |
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