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CBS51388_010735-T1, CBS51388_010735-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010735-T1
Unique NameCBS51388_010735-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:173166..174878+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010735-T1 ID=CBS51388_010735-T1|Name=CBS51388_010735-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1713bp|location=Sequence derived from alignment at An18:173166..174878+ (Aspergillus niger CBS 513.88)
ATGTACAAACCGGCACCACCGAGACCTAAAAAGACAAACATCATCCGCTC
CCGCAATGGCTGTAAAAGTTGCCGCAGTCGCAGAACCAAGTGTGATGAGC
GGAAGCCAAAATGCGGAACCTGCGCGAGACTTGGAAAGATCTGTGAATAT
GCTAGACCAGCTTTCAAATTTCAAGTTACGACAGTCGACGACCCGAGACC
ACCACCAGAGCCACTAGCAACAGCAACAGCGTCCAATGTGTCGTCAGAAG
AGACAACCCCAACACCGGCCGGAGACCAAACTTCGGTCGTTCGAGCCGCA
CAAGATGTTCCCTCTATCGGAAGCTATGACATTATCCGGTCATTGCAAAC
GACGGACCGCGATATCTTCTATACCACCTACTGGGAGGGCTCTTGCTTGC
CAGCCTTGCACCCGATATTCAAATTCGCCACCTCATTGGCCGCTGGCCAT
CCCATTCTCAACGACGCCCTCCTAGCTTTATCTGCCTGCAATATTGGCCG
CATTCAGGCCGAGCACAGAACAGAATCGTCTGGGTTGATGTGCTCATTGA
GTCCTAGTCTGGTTCACCAGACACGGAGTCATCTATACTACTCGTCCGCG
ATCCAAAAGCTGGCCATCATGCAATCACAAGACTACCATCAGAACCCTAC
CACGATCCTGATTGTGCTTGTTCTGTTCGCTCATCTAGAGCAAGCTATGG
GGAATTTTCAGGGCTTCTATACTCACGTCCGGGGCATGATGAATCTTCTT
GAATGGCATAACGGCGTCAAAGACGCAGCCATCAAGTCGCTGCTTGCTTC
ATGGATGCAAATCCGGTATGTTGTCTGGTGGGCTCGGGCCTATTTCAGTT
CGATAGAAGTTTGTCAGCATCTCCCATCGATACCTTTACCGGCCTCCCTA
TTAGACGTCCCGCAGACATTGCATGAGCGACGTGTGAAAGTTCTTAGCAT
CATGTGTGAATCACACCGGTTGAATTTCAACGCCGTGCTGCAGCAGTTTC
GGAATTTGCAGTCGAACGATGCTAGTGGTTCCGATGTCGACAAACGCTAT
GTTTATTGCACTGCTCTATTGCATCGAGAAGCGGCAAAGCTGGATGCGTG
GGTGTTGCAACTTCCGCCATCTGAGCAGCCAATATACGAGCTCAACGACA
CAAACGGTACTACCATCCGTTTTCAGTCCCACGATGCCGCGCTGAACTAC
GCATACTACGCGGTTGCGCGAGCCATGCAGTGCACCGGGGTCTTACAACT
CCTCTACAGTTCTGATACCCCTCACCACGAACGGGAGTGTAATGAAGAAG
AGTATTGGGTTCAGACATTAGTCCGTATTGCACAGTGGAGCGATATGCAG
ACATCCATCACCAAAAATAGCTACACCATCGGGTTCTCAGGCTTACTCCT
GGCGGGTATTCTCCGATGCCAGAGTCTATCAGTCGGGTTGGAGATCCAGG
ACTGGTTACAGGCACTCATAAACCTGCAACCAACAGAAGAAGGGGCATTT
CCGATCTATCAGACTTTTCATGTGGTCAAGATCATCAATCAACAGAGGGC
AATCGGCCGAGATATCTTTGCCGTCACTCAGCCGGTGGATGATGGAGGCG
GAACGCCCAAGCTTACTGGCTACAACAGTCAGTCGATCACAAGCCTTCTC
TTCCATGGGAAGTACCAGAATTTGGATTGCCTTTTCCAAGAGTGCATCGC
CCTGGATGTTTGA
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Coding sequence (CDS) from alignment at An18:173166..174878+

>CBS51388_010735-T1 ID=CBS51388_010735-T1|Name=CBS51388_010735-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1713bp|location=Sequence derived from alignment at An18:173166..174878+ (Aspergillus niger CBS 513.88)
ATGTACAAACCGGCACCACCGAGACCTAAAAAGACAAACATCATCCGCTC
CCGCAATGGCTGTAAAAGTTGCCGCAGTCGCAGAACCAAGTGTGATGAGC
GGAAGCCAAAATGCGGAACCTGCGCGAGACTTGGAAAGATCTGTGAATAT
GCTAGACCAGCTTTCAAATTTCAAGTTACGACAGTCGACGACCCGAGACC
ACCACCAGAGCCACTAGCAACAGCAACAGCGTCCAATGTGTCGTCAGAAG
AGACAACCCCAACACCGGCCGGAGACCAAACTTCGGTCGTTCGAGCCGCA
CAAGATGTTCCCTCTATCGGAAGCTATGACATTATCCGGTCATTGCAAAC
GACGGACCGCGATATCTTCTATACCACCTACTGGGAGGGCTCTTGCTTGC
CAGCCTTGCACCCGATATTCAAATTCGCCACCTCATTGGCCGCTGGCCAT
CCCATTCTCAACGACGCCCTCCTAGCTTTATCTGCCTGCAATATTGGCCG
CATTCAGGCCGAGCACAGAACAGAATCGTCTGGGTTGATGTGCTCATTGA
GTCCTAGTCTGGTTCACCAGACACGGAGTCATCTATACTACTCGTCCGCG
ATCCAAAAGCTGGCCATCATGCAATCACAAGACTACCATCAGAACCCTAC
CACGATCCTGATTGTGCTTGTTCTGTTCGCTCATCTAGAGCAAGCTATGG
GGAATTTTCAGGGCTTCTATACTCACGTCCGGGGCATGATGAATCTTCTT
GAATGGCATAACGGCGTCAAAGACGCAGCCATCAAGTCGCTGCTTGCTTC
ATGGATGCAAATCCGGTATGTTGTCTGGTGGGCTCGGGCCTATTTCAGTT
CGATAGAAGTTTGTCAGCATCTCCCATCGATACCTTTACCGGCCTCCCTA
TTAGACGTCCCGCAGACATTGCATGAGCGACGTGTGAAAGTTCTTAGCAT
CATGTGTGAATCACACCGGTTGAATTTCAACGCCGTGCTGCAGCAGTTTC
GGAATTTGCAGTCGAACGATGCTAGTGGTTCCGATGTCGACAAACGCTAT
GTTTATTGCACTGCTCTATTGCATCGAGAAGCGGCAAAGCTGGATGCGTG
GGTGTTGCAACTTCCGCCATCTGAGCAGCCAATATACGAGCTCAACGACA
CAAACGGTACTACCATCCGTTTTCAGTCCCACGATGCCGCGCTGAACTAC
GCATACTACGCGGTTGCGCGAGCCATGCAGTGCACCGGGGTCTTACAACT
CCTCTACAGTTCTGATACCCCTCACCACGAACGGGAGTGTAATGAAGAAG
AGTATTGGGTTCAGACATTAGTCCGTATTGCACAGTGGAGCGATATGCAG
ACATCCATCACCAAAAATAGCTACACCATCGGGTTCTCAGGCTTACTCCT
GGCGGGTATTCTCCGATGCCAGAGTCTATCAGTCGGGTTGGAGATCCAGG
ACTGGTTACAGGCACTCATAAACCTGCAACCAACAGAAGAAGGGGCATTT
CCGATCTATCAGACTTTTCATGTGGTCAAGATCATCAATCAACAGAGGGC
AATCGGCCGAGATATCTTTGCCGTCACTCAGCCGGTGGATGATGGAGGCG
GAACGCCCAAGCTTACTGGCTACAACAGTCAGTCGATCACAAGCCTTCTC
TTCCATGGGAAGTACCAGAATTTGGATTGCCTTTTCCAAGAGTGCATCGC
CCTGGATGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010735CBS51388_010735Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010735-T1.exon1CBS51388_010735-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010735-T1.cdsCBS51388_010735-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010735-T1CBS51388_010735-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:173166..174878 +
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