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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:222449..223480+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010759-T1 ID=CBS51388_010759-T1|Name=CBS51388_010759-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1032bp|location=Sequence derived from alignment at An18:222449..223480+ (Aspergillus niger CBS 513.88)
ATGACATCCCAGCGAATTCACCTCATCGGACTAGGAAGCATCGGGACTCT
GATCGCTCACTCGCTTCGCTCCCTCCCCGCACCCCCGCCCATAACGATTT
TACTCCATCGCGAATCAGCATACCAAGACTTTCTCTCTGGGGGGAGCAAG
CTGCGTCTCCAAATTGGAGAAGACGGGCCAACGCAAGAGACCACCGGGTA
CGACGCCGAACTCCTACAGGGGGAATCACCCATCCAGCACCTAATTGTAG
CGGTCAAGGCGAGCGCAACCATCCCCGCTCTCAGATCGATCCAGCACCGG
CTCGGACGGCATTCCGTGATCTGTCTCTTCCAAAATGGCCTAGGGCAAAT
CGAAGAGCTCAATGAGCGCCTATTCACGGACCCGCTTACACGACCGACCT
ACATGTTTGGCATTATGCGCCATGGGGTCTACATAAAAGCGCCGTTTGAA
GCCGTGCTGGCGGGGCTGACCGGATCATGCGCTCTGGGGATCGTCAACAA
TGACCAACAGGCATCCTCATTATCTGCTTCTTCGACAGCATCCGCCCAAT
CTCGATTTCTCATTAACCGGCTGGTCGAAGCACCGATCGTCCGAAGCTCC
GAACTGCCATGGATGGAGCTCCACCAGGCCCAGCTGCTGAAACTCGCGAC
CAACTGCGTGGTCAATCCACTGACGGCATTGCTGGACGTGCGGAACGGCT
CGCTGTTAGCTAACTCCGAGCTGCAGGAGATGCGACGTCAACTTCTCCAG
GAGATCTCGCTGGTGTTCCGTCGTCTTCCGGAGTTTCAGGGTCTGCCCGA
TGTGGAGGAACAATTCTCGGTGGCCAGACTCGAGGAGCAGTTGATCGGGA
ACATTGAGAAGACAGCCAGTAATTCCAGCAGTATGCGCGAGGATGTACGA
GCAGGTCGAGCGACAGAGATTGCATATATCAATGGATGGATAGTGCGACG
GGGCCAGCAGTTGGGGCTGGACTGTCCTACGAATCGGTGCCTGACCCAGC
TCATTCTGGCTAAGAGTAGCCAAGGGCGCTAA back to topCoding sequence (CDS) from alignment at An18:222449..223480+ >CBS51388_010759-T1 ID=CBS51388_010759-T1|Name=CBS51388_010759-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1032bp|location=Sequence derived from alignment at An18:222449..223480+ (Aspergillus niger CBS 513.88)
ATGACATCCCAGCGAATTCACCTCATCGGACTAGGAAGCATCGGGACTCT
GATCGCTCACTCGCTTCGCTCCCTCCCCGCACCCCCGCCCATAACGATTT
TACTCCATCGCGAATCAGCATACCAAGACTTTCTCTCTGGGGGGAGCAAG
CTGCGTCTCCAAATTGGAGAAGACGGGCCAACGCAAGAGACCACCGGGTA
CGACGCCGAACTCCTACAGGGGGAATCACCCATCCAGCACCTAATTGTAG
CGGTCAAGGCGAGCGCAACCATCCCCGCTCTCAGATCGATCCAGCACCGG
CTCGGACGGCATTCCGTGATCTGTCTCTTCCAAAATGGCCTAGGGCAAAT
CGAAGAGCTCAATGAGCGCCTATTCACGGACCCGCTTACACGACCGACCT
ACATGTTTGGCATTATGCGCCATGGGGTCTACATAAAAGCGCCGTTTGAA
GCCGTGCTGGCGGGGCTGACCGGATCATGCGCTCTGGGGATCGTCAACAA
TGACCAACAGGCATCCTCATTATCTGCTTCTTCGACAGCATCCGCCCAAT
CTCGATTTCTCATTAACCGGCTGGTCGAAGCACCGATCGTCCGAAGCTCC
GAACTGCCATGGATGGAGCTCCACCAGGCCCAGCTGCTGAAACTCGCGAC
CAACTGCGTGGTCAATCCACTGACGGCATTGCTGGACGTGCGGAACGGCT
CGCTGTTAGCTAACTCCGAGCTGCAGGAGATGCGACGTCAACTTCTCCAG
GAGATCTCGCTGGTGTTCCGTCGTCTTCCGGAGTTTCAGGGTCTGCCCGA
TGTGGAGGAACAATTCTCGGTGGCCAGACTCGAGGAGCAGTTGATCGGGA
ACATTGAGAAGACAGCCAGTAATTCCAGCAGTATGCGCGAGGATGTACGA
GCAGGTCGAGCGACAGAGATTGCATATATCAATGGATGGATAGTGCGACG
GGGCCAGCAGTTGGGGCTGGACTGTCCTACGAATCGGTGCCTGACCCAGC
TCATTCTGGCTAAGAGTAGCCAAGGGCGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015940 | pantothenate biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008677 | 2-dehydropantoate 2-reductase activity |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR003710 |
| DBxref | InterPro:IPR013332 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR013752 |
| DBxref | PFAM:PF08546 |
| DBxref | PFAM:PF02558 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:222449..223480 + |
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