You are here

Home

CBS51388_010760-T1, CBS51388_010760-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010760-T1
Unique NameCBS51388_010760-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:224372..226315+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010760-T1 ID=CBS51388_010760-T1|Name=CBS51388_010760-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1944bp|location=Sequence derived from alignment at An18:224372..226315+ (Aspergillus niger CBS 513.88)
ATGTCTCCCATCGACGAGCAACTAGAGATGGCGGAGGTCGATGCTCGGCC
CCATACTAATGGCGCGAGCAAGGAGGAAGGCCTCGAGAGGCCATCATCCT
CAGGTACCACTGGCTCGACCGGTTACAGTAGCTCGCTTGAATACAATCCC
CAGCTGCACACCCTTCATTCGCGGAACACCGAACTCGATCTAGAGCGTCA
TCGCACGGCCACTTCCCATGCCCTAAGCAGGATCGAAACCCAGCGGCTTC
AGCATCAGTTGACCGTGGGTGAAAGTGTCAAGTCTCGCGCCTCCCGCACG
CCTTTGCCTCGTATGGGCGCCAACAAGGATTACCCACCACCTCTTCCCGA
TCGCGAGGACTACGTCGTCGAGTTTGACGGTCCAGAAGATCCTTTATACC
CTCAGAACTGGGAATTGGGGACGAAGTATGCCTTTCCAACCCTGTCGCGC
ATGAAAGACATGTTGGTCGACCGAATACTGACTTATGTTCTCGCCTAGGA
TTTACATTAGCGCCATCCTCGCCTTCACCAGTATCTGCAGTACCTTCGAT
TCCGCTATCTTTAGTTCCTCTACCACCAACGTTGCGCGGGTATTCGGTGT
AGGTATTGAAGTCGCCACCCTGTCGAGTTCGTTGTATATCTGCGGTTATG
CGTCCGGTCCCCTGGTGTGGGCTCCCCTTTCCGAGCTGAAGGGACGGAAG
CCACCCATTGTGGTGGCTATGTTGGGATTCGGTATCTTCAACACCGCTGT
CGCCGTCGCCAAGGACCTGCAGACGATCATGATCTGTCGCTTCTTCTGTG
GTGTCTTTGGCAGTTGTCCGCTGGCGGTTGTGGCTGCCGTTTTCTCCGAT
ATCTATAACAACCGCACTCGTGGTGTTGCCATTGCCATGTTTTCCAGCAC
AGTGTTCTTGGGTCCGCTTCTGGCTCCGTTTATCGGTGGTTTCATTAATA
CGTCGTACCTGGGTTGGCGCTGGACCGCCTACATCCCCGCGTTCATGGGC
TATGCCGCCTTCGTGTTGAACATGTTCTTCCTGAAGGAATCCTATCCGCC
GATCATCCTGGTCTCGAAGGCTTCAGAACTGCGCCGTCGCACCAAGAACT
GGGGCATCCACGCCAAACAGGAGGAAATCGAGGTTGACTTGCGGGAGTTG
CTGGTGAATAACTTTTCCCGTCCCCTTCGGTTGCTCTTTGGCGAGCCATT
GATTCTGGCGGTGACGATTTACCTCAGTTTCATCTATGGCCTGTTGTACT
GCTTCTTGACAGCCTACACACTCGTCTTCCAGGGCGTGTACGGTATGTCT
GCTGGAGTTGGCGGATTGACGTTGTTTGGCATGGTGGTCGGTTTGTTCAT
TGCGGCCTCTTATATCATTTTCGCCAGTCGCGGGTACAACAAGAAGTTGG
AAGCGAATGGGGGCATTCCCGTCCCTGAATGGCGTCTGCCGCCTGTGATT
ATCGGTGGTGCGCTCTTCGCTGGAGGACTATTCTGGTTCGGTTGGACCGG
ATTCACGAAGAGTATCCATTGGATTGTACCCACACTGAGTGGATTGTTCA
CTGGACTTGGTCTGTTGATCATCTTCATCCAGTTGTTTAACTATCTGATC
GACACCTACCTTATGTTGTAAGTTGCCTTGCCTTACTCGTTGTTAGTGGA
CCCTGTTCTAATCATCATTCCAGTGCCGCATCGGCTATCGCAGCGAACAC
CTTCTGTCGTTCCCTAGTGGCAGCCAGCTTCCCCCTCTTCTCACGTCAAA
TGTTTAACAACATGGGCATCCAGTGGGCTGCCACGCTGCTGGGCTGTGTG
GCGTCTATCCTGGTGCCCATCCCGGTTGCTTTCTATTTCTATGGTAAAAA
CCTGAGGAAGCGGAGCAAGTTTGCGCCGTTTTATGACAAGGTTGCTGAGT
CTCATGCGGAGGATCCAGTGGAGAACGGAGTCGCGGAGCACTAA
back to top

Coding sequence (CDS) from alignment at An18:224372..226315+

>CBS51388_010760-T1 ID=CBS51388_010760-T1|Name=CBS51388_010760-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5445bp|location=Sequence derived from alignment at An18:224372..226315+ (Aspergillus niger CBS 513.88)
ATGTCTCCCATCGACGAGCAACTAGAGATGGCGGAGGTCGATGCTCGGCC
CCATACTAATGGCGCGAGCAAGGAGGAAGGCCTCGAGAGGCCATCATCCT
CAGGTACCACTGGCTCGACCGGTTACAGTAGCTCGCTTGAATACAATCCC
CAGCTGCACACCCTTCATTCGCGGAACACCGAACTCGATCTAGAGCGTCA
TCGCACGGCCACTTCCCATGCCCTAAGCAGGATCGAAACCCAGCGGCTTC
AGCATCAGTTGACCGTGGGTGAAAGTGTCAAGTCTCGCGCCTCCCGCACG
CCTTTGCCTCGTATGGGCGCCAACAAGGATTACCCACCACCTCTTCCCGA
TCGCGAGGACTACGTCGTCGAGTTTGACGGTCCAGAAGATCCTTTATACC
CTCAGAACTGGGAATTGGGGACGAAGATTTACATTAGCGCCATCCTCGCC
TTCACCAGTATCTGCAGTACCTTCGATTCCGCTATCTTTAGTTCCTCTAC
CACCAACGTTGCGCGGGTATTCGGTGTAGGTATTGAAGTCGCCACCCTGT
CGAGTTCGTTGTATATCTGCGGTTATGCGTCCGGTCCCCTGGTGTGGGCT
CCCCTTTCCGAGCTGAAGGGACGGAAGCCACCCATTGTGGTGGCTATGTT
GGGATTCGGTATCTTCAACACCGCTGTCGCCGTCGCCAAGGACCTGCAGA
CGATCATGATCTGTCGCTTCTTCTGTGGTGTCTTTGGCAGTTGTCCGCTG
GCGGTTGTGGCTGCCGTTTTCTCCGATATCTATAACAACCGCACTCGTGG
TGTTGCCATTGCCATGTTTTCCAGCACAGTGTTCTTGGGTCCGCTTCTGG
CTCCGTTTATCGGTGGTTTCATTAATACGTCGTACCTGGGTTGGCGCTGG
ACCGCCTACATCCCCGCGTTCATGGGCTATGCCGCCTTCGTGTTGAACAT
GTTCTTCCTGAAGGAATCCTATCCGCCGATCATCCTGGTCTCGAAGGCTT
CAGAACTGCGCCGTCGCACCAAGAACTGGGGCATCCACGCCAAACAGGAG
GAAATCGAGGTTGACTTGCGGGAGTTGCTGGTGAATAACTTTTCCCGTCC
CCTTCGGTTGCTCTTTGGCGAGCCATTGATTCTGGCGGTGACGATTTACC
TCAGTTTCATCTATGGCCTGTTGTACTGCTTCTTGACAGCCTACACACTC
GTCTTCCAGGGCGTGTACGGTATGTCTGCTGGAGTTGGCGGATTGACGTT
GTTTGGCATGGTGGTCGGTTTGTTCATTGCGGCCTCTTATATCATTTTCG
CCAGTCGCGGGTACAACAAGAAGTTGGAAGCGAATGGGGGCATTCCCGTC
CCTGAATGGCGTCTGCCGCCTGTGATTATCGGTGGTGCGCTCTTCGCTGG
AGGACTATTCTGGTTCGGTTGGACCGGATTCACGAAGAGTATCCATTGGA
TTGTACCCACACTGAGTGGATTGTTCACTGGACTTGGTCTGTTGATCATC
TTCATCCAGTTGTTTAACTATCTGATCGACACCTACCTTATGTTTGCCGC
ATCGGCTATCGCAGCGAACACCTTCTGTCGTTCCCTAGTGGCAGCCAGCT
TCCCCCTCTTCTCACGTCAAATGTTTAACAACATGGGCATCCAGTGGGCT
GCCACGCTGCTGGGCTGTGTGGCGTCTATCCTGGTGCCCATCCCGGTTGC
TTTCTATTTCTATGGTAAAAACCTGAGGAAGCGGAGCAAGTTTGCGCCGT
TTTATGACAAGGTTGCTGAGTCTCATGCGGAGGATCCAGTGGAGAACGGA
GTCGCGGAGCACTAAATGTCTCCCATCGACGAGCAACTAGAGATGGCGGA
GGTCGATGCTCGGCCCCATACTAATGGCGCGAGCAAGGAGGAAGGCCTCG
AGAGGCCATCATCCTCAGGTACCACTGGCTCGACCGGTTACAGTAGCTCG
CTTGAATACAATCCCCAGCTGCACACCCTTCATTCGCGGAACACCGAACT
CGATCTAGAGCGTCATCGCACGGCCACTTCCCATGCCCTAAGCAGGATCG
AAACCCAGCGGCTTCAGCATCAGTTGACCGTGGGTGAAAGTGTCAAGTCT
CGCGCCTCCCGCACGCCTTTGCCTCGTATGGGCGCCAACAAGGATTACCC
ACCACCTCTTCCCGATCGCGAGGACTACGTCGTCGAGTTTGACGGTCCAG
AAGATCCTTTATACCCTCAGAACTGGGAATTGGGGACGAAGATTTACATT
AGCGCCATCCTCGCCTTCACCAGTATCTGCAGTACCTTCGATTCCGCTAT
CTTTAGTTCCTCTACCACCAACGTTGCGCGGGTATTCGGTGTAGGTATTG
AAGTCGCCACCCTGTCGAGTTCGTTGTATATCTGCGGTTATGCGTCCGGT
CCCCTGGTGTGGGCTCCCCTTTCCGAGCTGAAGGGACGGAAGCCACCCAT
TGTGGTGGCTATGTTGGGATTCGGTATCTTCAACACCGCTGTCGCCGTCG
CCAAGGACCTGCAGACGATCATGATCTGTCGCTTCTTCTGTGGTGTCTTT
GGCAGTTGTCCGCTGGCGGTTGTGGCTGCCGTTTTCTCCGATATCTATAA
CAACCGCACTCGTGGTGTTGCCATTGCCATGTTTTCCAGCACAGTGTTCT
TGGGTCCGCTTCTGGCTCCGTTTATCGGTGGTTTCATTAATACGTCGTAC
CTGGGTTGGCGCTGGACCGCCTACATCCCCGCGTTCATGGGCTATGCCGC
CTTCGTGTTGAACATGTTCTTCCTGAAGGAATCCTATCCGCCGATCATCC
TGGTCTCGAAGGCTTCAGAACTGCGCCGTCGCACCAAGAACTGGGGCATC
CACGCCAAACAGGAGGAAATCGAGGTTGACTTGCGGGAGTTGCTGGTGAA
TAACTTTTCCCGTCCCCTTCGGTTGCTCTTTGGCGAGCCATTGATTCTGG
CGGTGACGATTTACCTCAGTTTCATCTATGGCCTGTTGTACTGCTTCTTG
ACAGCCTACACACTCGTCTTCCAGGGCGTGTACGGTATGTCTGCTGGAGT
TGGCGGATTGACGTTGTTTGGCATGGTGGTCGGTTTGTTCATTGCGGCCT
CTTATATCATTTTCGCCAGTCGCGGGTACAACAAGAAGTTGGAAGCGAAT
GGGGGCATTCCCGTCCCTGAATGGCGTCTGCCGCCTGTGATTATCGGTGG
TGCGCTCTTCGCTGGAGGACTATTCTGGTTCGGTTGGACCGGATTCACGA
AGAGTATCCATTGGATTGTACCCACACTGAGTGGATTGTTCACTGGACTT
GGTCTGTTGATCATCTTCATCCAGTTGTTTAACTATCTGATCGACACCTA
CCTTATGTTTGCCGCATCGGCTATCGCAGCGAACACCTTCTGTCGTTCCC
TAGTGGCAGCCAGCTTCCCCCTCTTCTCACGTCAAATGTTTAACAACATG
GGCATCCAGTGGGCTGCCACGCTGCTGGGCTGTGTGGCGTCTATCCTGGT
GCCCATCCCGGTTGCTTTCTATTTCTATGGTAAAAACCTGAGGAAGCGGA
GCAAGTTTGCGCCGTTTTATGACAAGGTTGCTGAGTCTCATGCGGAGGAT
CCAGTGGAGAACGGAGTCGCGGAGCACTAAATGTCTCCCATCGACGAGCA
ACTAGAGATGGCGGAGGTCGATGCTCGGCCCCATACTAATGGCGCGAGCA
AGGAGGAAGGCCTCGAGAGGCCATCATCCTCAGGTACCACTGGCTCGACC
GGTTACAGTAGCTCGCTTGAATACAATCCCCAGCTGCACACCCTTCATTC
GCGGAACACCGAACTCGATCTAGAGCGTCATCGCACGGCCACTTCCCATG
CCCTAAGCAGGATCGAAACCCAGCGGCTTCAGCATCAGTTGACCGTGGGT
GAAAGTGTCAAGTCTCGCGCCTCCCGCACGCCTTTGCCTCGTATGGGCGC
CAACAAGGATTACCCACCACCTCTTCCCGATCGCGAGGACTACGTCGTCG
AGTTTGACGGTCCAGAAGATCCTTTATACCCTCAGAACTGGGAATTGGGG
ACGAAGATTTACATTAGCGCCATCCTCGCCTTCACCAGTATCTGCAGTAC
CTTCGATTCCGCTATCTTTAGTTCCTCTACCACCAACGTTGCGCGGGTAT
TCGGTGTAGGTATTGAAGTCGCCACCCTGTCGAGTTCGTTGTATATCTGC
GGTTATGCGTCCGGTCCCCTGGTGTGGGCTCCCCTTTCCGAGCTGAAGGG
ACGGAAGCCACCCATTGTGGTGGCTATGTTGGGATTCGGTATCTTCAACA
CCGCTGTCGCCGTCGCCAAGGACCTGCAGACGATCATGATCTGTCGCTTC
TTCTGTGGTGTCTTTGGCAGTTGTCCGCTGGCGGTTGTGGCTGCCGTTTT
CTCCGATATCTATAACAACCGCACTCGTGGTGTTGCCATTGCCATGTTTT
CCAGCACAGTGTTCTTGGGTCCGCTTCTGGCTCCGTTTATCGGTGGTTTC
ATTAATACGTCGTACCTGGGTTGGCGCTGGACCGCCTACATCCCCGCGTT
CATGGGCTATGCCGCCTTCGTGTTGAACATGTTCTTCCTGAAGGAATCCT
ATCCGCCGATCATCCTGGTCTCGAAGGCTTCAGAACTGCGCCGTCGCACC
AAGAACTGGGGCATCCACGCCAAACAGGAGGAAATCGAGGTTGACTTGCG
GGAGTTGCTGGTGAATAACTTTTCCCGTCCCCTTCGGTTGCTCTTTGGCG
AGCCATTGATTCTGGCGGTGACGATTTACCTCAGTTTCATCTATGGCCTG
TTGTACTGCTTCTTGACAGCCTACACACTCGTCTTCCAGGGCGTGTACGG
TATGTCTGCTGGAGTTGGCGGATTGACGTTGTTTGGCATGGTGGTCGGTT
TGTTCATTGCGGCCTCTTATATCATTTTCGCCAGTCGCGGGTACAACAAG
AAGTTGGAAGCGAATGGGGGCATTCCCGTCCCTGAATGGCGTCTGCCGCC
TGTGATTATCGGTGGTGCGCTCTTCGCTGGAGGACTATTCTGGTTCGGTT
GGACCGGATTCACGAAGAGTATCCATTGGATTGTACCCACACTGAGTGGA
TTGTTCACTGGACTTGGTCTGTTGATCATCTTCATCCAGTTGTTTAACTA
TCTGATCGACACCTACCTTATGTTTGCCGCATCGGCTATCGCAGCGAACA
CCTTCTGTCGTTCCCTAGTGGCAGCCAGCTTCCCCCTCTTCTCACGTCAA
ATGTTTAACAACATGGGCATCCAGTGGGCTGCCACGCTGCTGGGCTGTGT
GGCGTCTATCCTGGTGCCCATCCCGGTTGCTTTCTATTTCTATGGTAAAA
ACCTGAGGAAGCGGAGCAAGTTTGCGCCGTTTTATGACAAGGTTGCTGAG
TCTCATGCGGAGGATCCAGTGGAGAACGGAGTCGCGGAGCACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010760CBS51388_010760Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010760-T1.exon1CBS51388_010760-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010760-T1.exon2CBS51388_010760-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010760-T1.exon3CBS51388_010760-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010760-T1.cdsCBS51388_010760-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010760-T1CBS51388_010760-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:224372..226315 +
Powered by Drupal