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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:321664..323705- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010799-T1 ID=CBS51388_010799-T1|Name=CBS51388_010799-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2042bp|location=Sequence derived from alignment at An18:321664..323705- (Aspergillus niger CBS 513.88)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGGCGTG
CTGAGATCTTGCAGTTCGCTATGTAAGTAGGTGGTCTGCTGGTAGCAATG
GTGGGCAATTGCGCTAATTGATTTGTTGCGGGGTGAAGGCAGGCGCATAT
GGAAGCTTTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATA
CCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCG
CCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGA
GGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGA
ACTTCAATGCCGCTGCGAATAAATTGCTCAACTCGGCGACGCGATTGGAA
GAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTATTGGCGGTTAA
GGAGAAGGGATGGAAGGTCTGCAGGTTGCCCCGGGAGAGAACTGCGCTGG
GAGTACAATATGGGTTCTTGGAAGGTAGGATGGCTACGTGCTTTGCTGGA
TTGATGCTGACTGTGTTCCTATAGCTACGCCTATATTCCGCGACCGGGGT
CTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATACTGGATAAGGG
ACTGGCACCACAGAAAACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCG
GACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCCCGATGCAGCG
TCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGTACGAGGAAGA
GCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGAAGTCATGGTG
TGACGACTCGTCAGAACCTGGTCCGACTGCCGATATCCGAAGACCAAGAG
ATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCGACGAAGACAA
GATCGAGTCAACAGAACACGATGTCCTTGCTAATGGGCTCTCGCACTCAA
TTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCGACGCAGAACC
CAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATCA
GCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCGCACGTCCGCT
GGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCGGGCGGCAGGG
ATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAA
GGTGCAGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATGC
CCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTTT
CGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTGGCACCCACTA
CGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGTC
GGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAG
TTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAAA
TACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCAT
ATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAG
AAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGGAAACATTTTC
ACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAA
GTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTCTAAGCCTGGT
CTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCATAA back to topCoding sequence (CDS) from alignment at An18:321664..323705- >CBS51388_010799-T1 ID=CBS51388_010799-T1|Name=CBS51388_010799-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5778bp|location=Sequence derived from alignment at An18:321664..323705- (Aspergillus niger CBS 513.88)
CTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACGGAGGGCTGAT
AATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGAAAACGAGGAC
GGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGATGCTCTAAAA
TGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAGGATTTTGCAA
GCACGCGACACAGTGTACGAGGAAGAGCTATTCCACGAGTTGATGCGCGA
AGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGTCAGAACCTGGTCC
GACTGCCGATATCCGAAGACCAAGAGATCCTGCTGGATCTGGTAGATGCG
GACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAGAACACGATGT
CCTTGCTAATGGGCTCTCGCACTCAATTCGGATCCTGCTCGCGTATGCAC
ACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCCGCTCTCCCAG
AAACGTCGGCTTACCCCCGAGTATCAGCTCCTGCGCCCTGTCATGGCGTA
TCTCCAACACAGCTCGCACGTCCGCTGGTTGGAGTCTTTCATGAATGATA
TATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTTCCACGCCGTG
CCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCAGGCTGTTCCGAAGGTAGA
GAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACATTTTCCGGCC
ATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCGCACCAACCCG
GTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTGACCTACCTCA
CCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAGAATGAAGCAG
CTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTCGGCCATCGCG
CTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAGAAGGCGCCGA
GGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGCGAACTGCTGG
CGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAGCCTGTCACGG
GAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTGAAGGGTTTGG
CCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAGACGTGGACAG
CCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGTCGCGGAGGTT
TCGCGGGAGCAGTCATAAGCAGGCGCATATGGAAGCTTTGTTCGCTTTGG
ATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCGGAGACT
TCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTTGAATGC
GGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGGATGTCA
AGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCTGCGAAT
AAATTGCTCAACTCGGCGACGCGATTGGAAGAAGAGGTCGCTTCGGAGAC
GAAGTACTGGGATGAAGTATTGGCGGTTAAGGAGAAGGGATGGAAGGTCT
GCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGGTTCTTG
GAAGATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGC
CCGACCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGA
TGGGGATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGA
AGAGGACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAAC
TTGCTGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGG
CGTGCTGAGATCTTGCAGTTCGCTATCTACGCCTATATTCCGCGACCGGG
GTCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATACTGGATAAG
GGACTGGCACCACAGAAAACGAGGACGGTTCGAGTGCGTGTGAAGCACCG
CGGACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCCCGATGCAG
CGTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGTACGAGGAA
GAGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGAAGTCATGG
TGTGACGACTCGTCAGAACCTGGTCCGACTGCCGATATCCGAAGACCAAG
AGATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCGACGAAGAC
AAGATCGAGTCAACAGAACACGATGTCCTTGCTAATGGGCTCTCGCACTC
AATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCGACGCAGAA
CCCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCCCCGAGTAT
CAGCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCGCACGTCCG
CTGGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCGGGCGGCAG
GGATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCG
AAGGTGCAGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAGTTCCTGAT
GCCCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCAAAGCTCTT
TTCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTGGCACCCAC
TACGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAGCCTCCCGG
TCGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCATTTCGTCA
AGTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGACGACCAAA
AATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGC
ATATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCA
AGAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGGAAACATTT
TCACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACC
AAGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTCTAAGCCTG
GTCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCATAAGCAGGC
GCATATGGAAGCTTTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTTTCGA
AGCATACCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAAACAG
GTTGCGCCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGAA
GTCGGAGGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGGG
CGCAGAACTTCAATGCCGCTGCGAATAAATTGCTCAACTCGGCGACGCGA
TTGGAAGAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTATTGGC
GGTTAAGGAGAAGGGATGGAAGGTCTGCAGGTTGCCCCGGGAGAGAACTG
CGCTGGGAGTACAATATGGGTTCTTGGAAGATGTCCGACTCATTCAGCCT
CCCCCTGCGCCCGCTCACCGAGAAGCCCGACCGCCCCGATACCCTTCCAA
TCGAGATCGCCCAAATCAACGCCCGATGGGGATCTTTCCGCGACGTGAAC
GAAGAGACACTGCTCGCCAAGATCGAAGAGGACAAGAACCGGGACCCATG
GGAAGAGGAAGATGAGGACGAAAAACTTGCTGAGGATGTGGACTCAACCG
AGCGTCTGGAAACATTGTACAAGCGGCGTGCTGAGATCTTGCAGTTCGCT
ATCTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACGGAGGGCTG
ATAATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGAAAACGAGG
ACGGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGATGCTCTAA
AATGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAGGATTTTGC
AAGCACGCGACACAGTGTACGAGGAAGAGCTATTCCACGAGTTGATGCGC
GAAGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGTCAGAACCTGGT
CCGACTGCCGATATCCGAAGACCAAGAGATCCTGCTGGATCTGGTAGATG
CGGACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAGAACACGAT
GTCCTTGCTAATGGGCTCTCGCACTCAATTCGGATCCTGCTCGCGTATGC
ACACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCCGCTCTCCC
AGAAACGTCGGCTTACCCCCGAGTATCAGCTCCTGCGCCCTGTCATGGCG
TATCTCCAACACAGCTCGCACGTCCGCTGGTTGGAGTCTTTCATGAATGA
TATATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTTCCACGCCG
TGCCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCAGGCTGTTCCGAAGGTA
GAGAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACATTTTCCGG
CCATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCGCACCAACC
CGGTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTGACCTACCT
CACCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAGAATGAAGC
AGCTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTCGGCCATCG
CGCTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAGAAGGCGCC
GAGGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGCGAACTGCT
GGCGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAGCCTGTCAC
GGGAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTGAAGGGTTT
GGCCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAGACGTGGAC
AGCCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGTCGCGGAGG
TTTCGCGGGAGCAGTCATAAGCAGGCGCATATGGAAGCTTTGTTCGCTTT
GGATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCGGAGA
CTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTTGAAT
GCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGGATGT
CAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCTGCGA
ATAAATTGCTCAACTCGGCGACGCGATTGGAAGAAGAGGTCGCTTCGGAG
ACGAAGTACTGGGATGAAGTATTGGCGGTTAAGGAGAAGGGATGGAAGGT
CTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGGTTCT
TGGAAGATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAA
GCCCGACCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCC
GATGGGGATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATC
GAAGAGGACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAA
ACTTGCTGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGC
GGCGTGCTGAGATCTTGCAGTTCGCTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019313 |
| DBxref | PFAM:PF10156 |
| Product | RNA polymerase II mediator complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:321664..323705 - |
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