|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:351223..352333+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010812-T1 ID=CBS51388_010812-T1|Name=CBS51388_010812-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1111bp|location=Sequence derived from alignment at An18:351223..352333+ (Aspergillus niger CBS 513.88)
ATGGTTGCCATTTCAGAGGTCCGCGGGCAGCTAGCCAATGTCAAGAACCT
GGGTTCGGGTCTGGTTGCTGTGTTCGGTATGTGCACGACTTTGCTAACTA
CCTTGATCTCTGACTAACAATATCCAGTTGGCGGGACCAGTGGAATTGGC
GTCTCGACTGCGCAAGAATTCACCCGTTATGCGACAGCTCCCCACATCTA
CCTGATTGGGCGCAACGAAGCCCAAGCATCGGAGATCATCTCAGAACTAC
GTACCGTCAACCAATCCGCAACAGTAGACTTCATCAAAAGCGATATCTCT
CTCCTCAAGAATGTCGACACCACATGTCGCGAAATCGCTCAAAAGGAGTC
CAAAGTCAACCTCCTCTTCCTGAGTCCAGGGATCTTGACCACGCAGGGAA
GGACTGGTTAGTACCCTCCACAAACCTCTCACCCCCCACCCCCCCCTTCT
CCAACTGACTGCGAAAACAGAAACAAGCGAAGGAATCGACCGCAAACTCA
GCCTTCACTACTACGCCCGAATGCGCTTCGCCGAGAATCTTCTACCACTA
CTAAACCAAGCCGCCTCATCGGGCAGCCTAGCCCGAGTAGTCTCCGTCAT
GAGCCCGGGAAACGAGGGCAAACTCGTTGAAGATGATCTCGACCTCCGGA
ACAATTACACCCTTCCGAATGCAGCTGCTCATGCCTGCACCATGACATCT
CTCTACATGGCCCAACTGGCGGCGGCACATCCCAACATCAGTTGGGTTCA
TAGCCGTCCTGGTGCGGTGAACACGAATATCATGCGTGATTTTAACCCGC
TTTTGCGGGGACTGACTCAGGCCCTTTTTGCGTTGACGCCTGTTTGCTCG
TCCATTGGGCTTCTTTCTGTCAAGGAGTCCGGAGAAAGGCATGTATATGC
GGCTACGAGTCCGCTGTTCGCGCCCCGGGTGAAAGGGGGGGACACGGTTG
GGGCTGATGGTGCGAAGGGCAGTGGTGCGTATCGGGTGGATTATGATAGT
TCTATTGTCAAGGCTAAGGCTGAGTTGGTTGAGAGGTATCTGGGTAGTGG
GGTGGGCAAGAAAGTGTGGGAGCATACCAGGGCTATGTATGCGAAAGCCA
CCGGGAATTAG back to topCoding sequence (CDS) from alignment at An18:351223..352333+ >CBS51388_010812-T1 ID=CBS51388_010812-T1|Name=CBS51388_010812-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2988bp|location=Sequence derived from alignment at An18:351223..352333+ (Aspergillus niger CBS 513.88)
ATGGTTGCCATTTCAGAGGTCCGCGGGCAGCTAGCCAATGTCAAGAACCT
GGGTTCGGGTCTGGTTGCTGTGTTCGTTGGCGGGACCAGTGGAATTGGCG
TCTCGACTGCGCAAGAATTCACCCGTTATGCGACAGCTCCCCACATCTAC
CTGATTGGGCGCAACGAAGCCCAAGCATCGGAGATCATCTCAGAACTACG
TACCGTCAACCAATCCGCAACAGTAGACTTCATCAAAAGCGATATCTCTC
TCCTCAAGAATGTCGACACCACATGTCGCGAAATCGCTCAAAAGGAGTCC
AAAGTCAACCTCCTCTTCCTGAGTCCAGGGATCTTGACCACGCAGGGAAG
GACTGAAACAAGCGAAGGAATCGACCGCAAACTCAGCCTTCACTACTACG
CCCGAATGCGCTTCGCCGAGAATCTTCTACCACTACTAAACCAAGCCGCC
TCATCGGGCAGCCTAGCCCGAGTAGTCTCCGTCATGAGCCCGGGAAACGA
GGGCAAACTCGTTGAAGATGATCTCGACCTCCGGAACAATTACACCCTTC
CGAATGCAGCTGCTCATGCCTGCACCATGACATCTCTCTACATGGCCCAA
CTGGCGGCGGCACATCCCAACATCAGTTGGGTTCATAGCCGTCCTGGTGC
GGTGAACACGAATATCATGCGTGATTTTAACCCGCTTTTGCGGGGACTGA
CTCAGGCCCTTTTTGCGTTGACGCCTGTTTGCTCGTCCATTGGGCTTCTT
TCTGTCAAGGAGTCCGGAGAAAGGCATGTATATGCGGCTACGAGTCCGCT
GTTCGCGCCCCGGGTGAAAGGGGGGGACACGGTTGGGGCTGATGGTGCGA
AGGGCAGTGGTGCGTATCGGGTGGATTATGATAGTTCTATTGTCAAGGCT
AAGGCTGAGTTGGTTGAGAGGTATCTGGGTAGTGGGGTGGGCAAGAAAGT
GTGGGAGCATACCAGGGCTATGTATGCGAAAGCCACCGGGAATTAGATGG
TTGCCATTTCAGAGGTCCGCGGGCAGCTAGCCAATGTCAAGAACCTGGGT
TCGGGTCTGGTTGCTGTGTTCGTTGGCGGGACCAGTGGAATTGGCGTCTC
GACTGCGCAAGAATTCACCCGTTATGCGACAGCTCCCCACATCTACCTGA
TTGGGCGCAACGAAGCCCAAGCATCGGAGATCATCTCAGAACTACGTACC
GTCAACCAATCCGCAACAGTAGACTTCATCAAAAGCGATATCTCTCTCCT
CAAGAATGTCGACACCACATGTCGCGAAATCGCTCAAAAGGAGTCCAAAG
TCAACCTCCTCTTCCTGAGTCCAGGGATCTTGACCACGCAGGGAAGGACT
GAAACAAGCGAAGGAATCGACCGCAAACTCAGCCTTCACTACTACGCCCG
AATGCGCTTCGCCGAGAATCTTCTACCACTACTAAACCAAGCCGCCTCAT
CGGGCAGCCTAGCCCGAGTAGTCTCCGTCATGAGCCCGGGAAACGAGGGC
AAACTCGTTGAAGATGATCTCGACCTCCGGAACAATTACACCCTTCCGAA
TGCAGCTGCTCATGCCTGCACCATGACATCTCTCTACATGGCCCAACTGG
CGGCGGCACATCCCAACATCAGTTGGGTTCATAGCCGTCCTGGTGCGGTG
AACACGAATATCATGCGTGATTTTAACCCGCTTTTGCGGGGACTGACTCA
GGCCCTTTTTGCGTTGACGCCTGTTTGCTCGTCCATTGGGCTTCTTTCTG
TCAAGGAGTCCGGAGAAAGGCATGTATATGCGGCTACGAGTCCGCTGTTC
GCGCCCCGGGTGAAAGGGGGGGACACGGTTGGGGCTGATGGTGCGAAGGG
CAGTGGTGCGTATCGGGTGGATTATGATAGTTCTATTGTCAAGGCTAAGG
CTGAGTTGGTTGAGAGGTATCTGGGTAGTGGGGTGGGCAAGAAAGTGTGG
GAGCATACCAGGGCTATGTATGCGAAAGCCACCGGGAATTAGATGGTTGC
CATTTCAGAGGTCCGCGGGCAGCTAGCCAATGTCAAGAACCTGGGTTCGG
GTCTGGTTGCTGTGTTCGTTGGCGGGACCAGTGGAATTGGCGTCTCGACT
GCGCAAGAATTCACCCGTTATGCGACAGCTCCCCACATCTACCTGATTGG
GCGCAACGAAGCCCAAGCATCGGAGATCATCTCAGAACTACGTACCGTCA
ACCAATCCGCAACAGTAGACTTCATCAAAAGCGATATCTCTCTCCTCAAG
AATGTCGACACCACATGTCGCGAAATCGCTCAAAAGGAGTCCAAAGTCAA
CCTCCTCTTCCTGAGTCCAGGGATCTTGACCACGCAGGGAAGGACTGAAA
CAAGCGAAGGAATCGACCGCAAACTCAGCCTTCACTACTACGCCCGAATG
CGCTTCGCCGAGAATCTTCTACCACTACTAAACCAAGCCGCCTCATCGGG
CAGCCTAGCCCGAGTAGTCTCCGTCATGAGCCCGGGAAACGAGGGCAAAC
TCGTTGAAGATGATCTCGACCTCCGGAACAATTACACCCTTCCGAATGCA
GCTGCTCATGCCTGCACCATGACATCTCTCTACATGGCCCAACTGGCGGC
GGCACATCCCAACATCAGTTGGGTTCATAGCCGTCCTGGTGCGGTGAACA
CGAATATCATGCGTGATTTTAACCCGCTTTTGCGGGGACTGACTCAGGCC
CTTTTTGCGTTGACGCCTGTTTGCTCGTCCATTGGGCTTCTTTCTGTCAA
GGAGTCCGGAGAAAGGCATGTATATGCGGCTACGAGTCCGCTGTTCGCGC
CCCGGGTGAAAGGGGGGGACACGGTTGGGGCTGATGGTGCGAAGGGCAGT
GGTGCGTATCGGGTGGATTATGATAGTTCTATTGTCAAGGCTAAGGCTGA
GTTGGTTGAGAGGTATCTGGGTAGTGGGGTGGGCAAGAAAGTGTGGGAGC
ATACCAGGGCTATGTATGCGAAAGCCACCGGGAATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:351223..352333 + |
|
