You are here

Home

CBS51388_010867-T1, CBS51388_010867-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010867-T1
Unique NameCBS51388_010867-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:534139..535967-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010867-T1 ID=CBS51388_010867-T1|Name=CBS51388_010867-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1829bp|location=Sequence derived from alignment at An18:534139..535967- (Aspergillus niger CBS 513.88)
ATGGCCCTCGCCTACCTCTGCAAACAATGGGAACGAACCCAAACCCAAAC
GAGCGACGAGAAAACCTCCGTCACTGCATTTGTCGTCGACCACAAAGCCC
GCGAGGAAAGTACCCGCGAGGCGAACATGGTTGCCGGCTGGCTTGATGAT
ATGGGTATATCTATCCCCTACCCGTCACATCTACAAAACCGAATTGGAGT
ATACTAAATAAAGGTGCAGGCCTACAAACGCAAATCCTCCCCCTAACCTG
GCCATCTCACCACATCTCCGCTTTTGAAACCCACGCCCGCCGCCTCCGCT
TCCAGGCCCTCGGCCAAGCCTGTCGAGCACATAGCATTGAGACCCTCCTG
ATGGGCCACCACCAAGATGATAACGTCGAAACGACCCTCTGGCGCCTCTG
CACGGGTGCCAGGGGCGCTGGCCTAGCGGGTATTCCAGCAGTGACGCGCA
TTCCTGAATGCCATGGCTTGTTTGGAGTTGCGGAGAGTGGATCCTCAATA
ACGTTACTGAAGCCAGGAAACAGTGACTATCGAATAAAGACTACAAATAC
CAACGAACTCAAACTCACAGGATCATCATCTAACACTACACAACACCAAC
AAACAAAATACAAAATAGCAACAGGCGGCATCTCCATAGCCCGCCCCCTC
CTCGCCTTCCCAAAACAAAACCTCCTCGCAACATGCAAAGCAAACAACAT
CCCCTACGTCGAAGATCCAACGAACTTCGATCCAACTTTGACTCCCCGAA
ACGCTATCCGGAGTCTTCTCGCAGAGAGGAAACTCCCTCGTGCGCTGCGC
GAAGAATCTATTCTTTCGCTAATGAGGAAGAGTAATATGCTTCTGCGGTC
AGTGACGCAGTCGTCGAATGAGATGCTTGATCGATGCGAGCTTCTATCAT
TCGCTCCTGATACGGGGAGCATGATAGTCAGATTCCCCCCGCCACCACCT
TTATCAGATAAACCCAACTCAGCAGAACAGAAGAAGAATGATATCCCATC
GCTCATCCTCCGACGCATCACGGAACTCATCTCCCCGTTCCCGGAGAATC
ATTTCCCGCTGAGGAGTTTCGAGGCCTTTACTTCACGTGTTTTCTGTCCC
TCTCCTTCTTCAGGATTCCAGGGAGGAGAAGGCAGCATAGCAAAACAGCA
ATCCTTCACGTTGGGTGGCGTTATGTTCCAACCTCTTCGATGCGATCTAT
CCTCAGCCTCTACCTCTACCAAAACTACTCCAGATATCACAAAAGAGGAT
GGAGGCTATGGAAATACATACCTTCTGACTCGCCAACCATACATGCGCAA
CCGACTTCCTATTCTTCCTATCACTGTTCCCATCGATTCATCCTCAACAT
CTTCCGAACATAGCACAACTAAATCTCAAGAAACTACCAATATGTCATCA
TCATCATTATCATCATCATCATCGGAATGGCACCTCTGGGATAACAGATA
CTGGTTCCGTGTCACGGGGACGAGCATATCACCTTCATCGGGGGCAGCTC
CGGAATCCACATCGCTATCGCTGATCGTGCGGCCGCTACAAAAGTCTGAT
TTGAAGAACATCCGCACGGCAGCGTCAAAAGAGGAAATGCGAGCGTTAAT
GGATCGGTTGGGGCGGGATGCGCCGGGATTAGTACGTTTCACGGTGCCGT
TGTTGGTATTGGTTGGAGATGGAGGGAAAGAGGTGCCGTTGGCGTTGCCG
ACTATGGAGACGTGGTTGCCTGGAGCTGAAGACATGCTACAGTCAATGAC
CTGTAATATCCGGTGGGAGTGGATGTATAAGATGATTGATCAGGAACCGT
TGGAACGGATGGGTTGGTTGAAGAACTAG
back to top

Coding sequence (CDS) from alignment at An18:534139..535967-

>CBS51388_010867-T1 ID=CBS51388_010867-T1|Name=CBS51388_010867-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3528bp|location=Sequence derived from alignment at An18:534139..535967- (Aspergillus niger CBS 513.88)
GCCTACAAACGCAAATCCTCCCCCTAACCTGGCCATCTCACCACATCTCC
GCTTTTGAAACCCACGCCCGCCGCCTCCGCTTCCAGGCCCTCGGCCAAGC
CTGTCGAGCACATAGCATTGAGACCCTCCTGATGGGCCACCACCAAGATG
ATAACGTCGAAACGACCCTCTGGCGCCTCTGCACGGGTGCCAGGGGCGCT
GGCCTAGCGGGTATTCCAGCAGTGACGCGCATTCCTGAATGCCATGGCTT
GTTTGGAGTTGCGGAGAGTGGATCCTCAATAACGTTACTGAAGCCAGGAA
ACAGTGACTATCGAATAAAGACTACAAATACCAACGAACTCAAACTCACA
GGATCATCATCTAACACTACACAACACCAACAAACAAAATACAAAATAGC
AACAGGCGGCATCTCCATAGCCCGCCCCCTCCTCGCCTTCCCAAAACAAA
ACCTCCTCGCAACATGCAAAGCAAACAACATCCCCTACGTCGAAGATCCA
ACGAACTTCGATCCAACTTTGACTCCCCGAAACGCTATCCGGAGTCTTCT
CGCAGAGAGGAAACTCCCTCGTGCGCTGCGCGAAGAATCTATTCTTTCGC
TAATGAGGAAGAGTAATATGCTTCTGCGGTCAGTGACGCAGTCGTCGAAT
GAGATGCTTGATCGATGCGAGCTTCTATCATTCGCTCCTGATACGGGGAG
CATGATAGTCAGATTCCCCCCGCCACCACCTTTATCAGATAAACCCAACT
CAGCAGAACAGAAGAAGAATGATATCCCATCGCTCATCCTCCGACGCATC
ACGGAACTCATCTCCCCGTTCCCGGAGAATCATTTCCCGCTGAGGAGTTT
CGAGGCCTTTACTTCACGTGTTTTCTGTCCCTCTCCTTCTTCAGGATTCC
AGGGAGGAGAAGGCAGCATAGCAAAACAGCAATCCTTCACGTTGGGTGGC
GTTATGTTCCAACCTCTTCGATGCGATCTATCCTCAGCCTCTACCTCTAC
CAAAACTACTCCAGATATCACAAAAGAGGATGGAGGCTATGGAAATACAT
ACCTTCTGACTCGCCAACCATACATGCGCAACCGACTTCCTATTCTTCCT
ATCACTGTTCCCATCGATTCATCCTCAACATCTTCCGAACATAGCACAAC
TAAATCTCAAGAAACTACCAATATGTCATCATCATCATTATCATCATCAT
CATCGGAATGGCACCTCTGGGATAACAGATACTGGTTCCGTGTCACGGGG
ACGAGCATATCACCTTCATCGGGGGCAGCTCCGGAATCCACATCGCTATC
GCTGATCGTGCGGCCGCTACAAAAGTCTGATTTGAAGAACATCCGCACGG
CAGCGTCAAAAGAGGAAATGCGAGCGTTAATGGATCGGTTGGGGCGGGAT
GCGCCGGGATTAGTACGTTTCACGGTGCCGTTGTTGGTATTGGTTGGAGA
TGGAGGGAAAGAGGTGCCGTTGGCGTTGCCGACTATGGAGACGTGGTTGC
CTGGAGCTGAAGACATGCTACAGTCAATGACCTGTAATATCCGGTGGGAG
TGGATGTATAAGATGATTGATCAGGAACCGTTGGAACGGATGGGTTGGTT
GAAGAACTAGATGGCCCTCGCCTACCTCTGCAAACAATGGGAACGAACCC
AAACCCAAACGAGCGACGAGAAAACCTCCGTCACTGCATTTGTCGTCGAC
CACAAAGCCCGCGAGGAAAGTACCCGCGAGGCGAACATGGTTGCCGGCTG
GCTTGATGATATGGGCCTACAAACGCAAATCCTCCCCCTAACCTGGCCAT
CTCACCACATCTCCGCTTTTGAAACCCACGCCCGCCGCCTCCGCTTCCAG
GCCCTCGGCCAAGCCTGTCGAGCACATAGCATTGAGACCCTCCTGATGGG
CCACCACCAAGATGATAACGTCGAAACGACCCTCTGGCGCCTCTGCACGG
GTGCCAGGGGCGCTGGCCTAGCGGGTATTCCAGCAGTGACGCGCATTCCT
GAATGCCATGGCTTGTTTGGAGTTGCGGAGAGTGGATCCTCAATAACGTT
ACTGAAGCCAGGAAACAGTGACTATCGAATAAAGACTACAAATACCAACG
AACTCAAACTCACAGGATCATCATCTAACACTACACAACACCAACAAACA
AAATACAAAATAGCAACAGGCGGCATCTCCATAGCCCGCCCCCTCCTCGC
CTTCCCAAAACAAAACCTCCTCGCAACATGCAAAGCAAACAACATCCCCT
ACGTCGAAGATCCAACGAACTTCGATCCAACTTTGACTCCCCGAAACGCT
ATCCGGAGTCTTCTCGCAGAGAGGAAACTCCCTCGTGCGCTGCGCGAAGA
ATCTATTCTTTCGCTAATGAGGAAGAGTAATATGCTTCTGCGGTCAGTGA
CGCAGTCGTCGAATGAGATGCTTGATCGATGCGAGCTTCTATCATTCGCT
CCTGATACGGGGAGCATGATAGTCAGATTCCCCCCGCCACCACCTTTATC
AGATAAACCCAACTCAGCAGAACAGAAGAAGAATGATATCCCATCGCTCA
TCCTCCGACGCATCACGGAACTCATCTCCCCGTTCCCGGAGAATCATTTC
CCGCTGAGGAGTTTCGAGGCCTTTACTTCACGTGTTTTCTGTCCCTCTCC
TTCTTCAGGATTCCAGGGAGGAGAAGGCAGCATAGCAAAACAGCAATCCT
TCACGTTGGGTGGCGTTATGTTCCAACCTCTTCGATGCGATCTATCCTCA
GCCTCTACCTCTACCAAAACTACTCCAGATATCACAAAAGAGGATGGAGG
CTATGGAAATACATACCTTCTGACTCGCCAACCATACATGCGCAACCGAC
TTCCTATTCTTCCTATCACTGTTCCCATCGATTCATCCTCAACATCTTCC
GAACATAGCACAACTAAATCTCAAGAAACTACCAATATGTCATCATCATC
ATTATCATCATCATCATCGGAATGGCACCTCTGGGATAACAGATACTGGT
TCCGTGTCACGGGGACGAGCATATCACCTTCATCGGGGGCAGCTCCGGAA
TCCACATCGCTATCGCTGATCGTGCGGCCGCTACAAAAGTCTGATTTGAA
GAACATCCGCACGGCAGCGTCAAAAGAGGAAATGCGAGCGTTAATGGATC
GGTTGGGGCGGGATGCGCCGGGATTAGTACGTTTCACGGTGCCGTTGTTG
GTATTGGTTGGAGATGGAGGGAAAGAGGTGCCGTTGGCGTTGCCGACTAT
GGAGACGTGGTTGCCTGGAGCTGAAGACATGCTACAGTCAATGACCTGTA
ATATCCGGTGGGAGTGGATGTATAAGATGATTGATCAGGAACCGTTGGAA
CGGATGGGTTGGTTGAAGAACTAGATGGCCCTCGCCTACCTCTGCAAACA
ATGGGAACGAACCCAAACCCAAACGAGCGACGAGAAAACCTCCGTCACTG
CATTTGTCGTCGACCACAAAGCCCGCGAGGAAAGTACCCGCGAGGCGAAC
ATGGTTGCCGGCTGGCTTGATGATATGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016879ligase activity, forming carbon-nitrogen bonds
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010867CBS51388_010867Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010867-T1CBS51388_010867-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010867-T1.cdsCBS51388_010867-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010867-T1.exon2CBS51388_010867-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010867-T1.exon1CBS51388_010867-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR012795
DBxrefInterPro:IPR011063
DBxrefPFAM:PF01171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:534139..535967 -
Powered by Drupal