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CBS51388_010868-T1, CBS51388_010868-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010868-T1
Unique NameCBS51388_010868-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:539374..541248-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010868-T1 ID=CBS51388_010868-T1|Name=CBS51388_010868-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1875bp|location=Sequence derived from alignment at An18:539374..541248- (Aspergillus niger CBS 513.88)
ATGTTCGCGTCGAGTATCCGATCGAGAGCTCTGGGATTGAGCCCACGAGC
CCGGTTTGAGAATACGTACGAGAGAATCTTCCCTTCCAATGCTTCTCTTT
CCCTCCTCAAAATTCGACAGATGCTGATAACCATTGTTACTAGTCGTCTT
CCATCTTCCACTAGCGGGCGCCGTTATAGATCCGATGAGCCCCTCAACCG
AATTTCCTCGAAAATCACACAACCCAAATCCCAGGGTGCTTCGCAAGCAA
TGCTCTACGCCACCGGCCTAACAGAGGAAGACATGTCCAAGCCACAGGTC
GGTATCTCCTCGGTGTGGTTCGAGGGTAACCCATGCAACATGCACTTGCA
TGACCTGTCTGCCATTGTGCGCGATTCCGTGCTCCGTGCGGGTCTGGTCC
CTATGCGATTCAACTCAGTTGGAGTGTCGGATGGGATCAGTATGGGTACA
AAGGGAATGAGATACAGCCTGCAGAGCCGGGAGCTGATCGCTGATGGTAT
TGAGACGGTGATGAATGCCCAGTGGTACGATGCGAATGTGTCGCTCCCGG
GTTGTGATAAGAATATGCCAGGTGTATTAATAGCGATGGGACGCACGAAC
CGACCTAGCATCATGGTCTACGGTGGCAGTATCAAGCCTGGATGCAGTGC
AAAGGGCCAGAAATTGGACCTGGTCAGTGCATTCCAGTCATATGGCCAGT
TCATCACCGGCCAGATCGACGAGAAGGAGCGGTTCGATATCATTCGCAAT
GCATGCCCCGGCAGAGGTGCATGCGGTGGCATGTACACGGCTAATACGCT
GGCCACGGCTATTGAGACTATGGGAATGACTATTCCTGGTAGTAGTAGTT
GCCCGGCAGATGATCGCAAGAAGCTAGTTGAGTGCGAAAATATTGGCGAG
GTGGTTAAAAATATGCTCAGGGAAGATATCAAACCCAGGGATATCTTAAC
ACGTCAAGCCTTCGAGAATGCAATGATTGTAGTGAACGTGCTGGGTGGCA
GTACTAATGCTGTTTTACATCTGATTGCCATTGCTGACTCTGTCGGTATC
AAGTTGACTATTGATGACTTCCAGGCAGTATCTGATAAGACACCGTTCCT
GGCTGATTTGAAGCCATCTGGAAAGTATCTTATGAATGATCTTTATAATA
TCGGTGGCACACCAGCCCTCCTGAAATATCTCCTGAAGGAGGGCTTGATC
GATGGCTCAGGAGTTACTGTTACCGGTAAAACAATGAAGGAAAATGTAGC
CTCATGGCCTGATTTTCCTGCTGACCAGGATATCATCCGCCCCCTCAACA
ACCCTATCAAACCATCTGGCCATCTCCAGATTCTTCGCGGATCGCTGGCC
CCGGGCGGTTCCGTGGGTAAGATTACTGGAAAGGAGGGTCTGCGGTTTGA
GGGTATAGCTAAATGCTATGATTACGAAGATGCATTCATTGAGTCCCTTG
AGCGGGGTGAGATCAAGAAGGGCGAGAAAACAGTCGTGATTATCCGGTAT
GAAGGCCCCAAGGGTGGCCCAGGAATGCCTGAGATGCTCAAGCCCAGCGC
GGCCATTATGGGCGCTGGACTTGGCCAGGACGTTGCTCTTCTTACAGATG
GAAGATTCTCGGGTGGCAGTCACGGATTTTTGATCGGACATATCGTGCCG
GAAGCCATGGAAGGCGGCCCGATCGCGTTGGCTCGAGACGGTGATCGGAT
CGTGATTGATGCTGAGGAAAGAGTGGTCGATCTGGATATCTCTACTGAGG
AGCTCGAGAAGAGGAGGAAGGAGTGGAACGCACCCCCGCTCCGGTACCAG
AAGGGAACTCTGAAGAAATATTGCACGCTGGTCAGCGACGCCAGCCATGG
TTGTGTCACGGACGGACCGATATAG
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Coding sequence (CDS) from alignment at An18:539374..541248-

>CBS51388_010868-T1 ID=CBS51388_010868-T1|Name=CBS51388_010868-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3594bp|location=Sequence derived from alignment at An18:539374..541248- (Aspergillus niger CBS 513.88)
TCGTCTTCCATCTTCCACTAGCGGGCGCCGTTATAGATCCGATGAGCCCC
TCAACCGAATTTCCTCGAAAATCACACAACCCAAATCCCAGGGTGCTTCG
CAAGCAATGCTCTACGCCACCGGCCTAACAGAGGAAGACATGTCCAAGCC
ACAGGTCGGTATCTCCTCGGTGTGGTTCGAGGGTAACCCATGCAACATGC
ACTTGCATGACCTGTCTGCCATTGTGCGCGATTCCGTGCTCCGTGCGGGT
CTGGTCCCTATGCGATTCAACTCAGTTGGAGTGTCGGATGGGATCAGTAT
GGGTACAAAGGGAATGAGATACAGCCTGCAGAGCCGGGAGCTGATCGCTG
ATGGTATTGAGACGGTGATGAATGCCCAGTGGTACGATGCGAATGTGTCG
CTCCCGGGTTGTGATAAGAATATGCCAGGTGTATTAATAGCGATGGGACG
CACGAACCGACCTAGCATCATGGTCTACGGTGGCAGTATCAAGCCTGGAT
GCAGTGCAAAGGGCCAGAAATTGGACCTGGTCAGTGCATTCCAGTCATAT
GGCCAGTTCATCACCGGCCAGATCGACGAGAAGGAGCGGTTCGATATCAT
TCGCAATGCATGCCCCGGCAGAGGTGCATGCGGTGGCATGTACACGGCTA
ATACGCTGGCCACGGCTATTGAGACTATGGGAATGACTATTCCTGGTAGT
AGTAGTTGCCCGGCAGATGATCGCAAGAAGCTAGTTGAGTGCGAAAATAT
TGGCGAGGTGGTTAAAAATATGCTCAGGGAAGATATCAAACCCAGGGATA
TCTTAACACGTCAAGCCTTCGAGAATGCAATGATTGTAGTGAACGTGCTG
GGTGGCAGTACTAATGCTGTTTTACATCTGATTGCCATTGCTGACTCTGT
CGGTATCAAGTTGACTATTGATGACTTCCAGGCAGTATCTGATAAGACAC
CGTTCCTGGCTGATTTGAAGCCATCTGGAAAGTATCTTATGAATGATCTT
TATAATATCGGTGGCACACCAGCCCTCCTGAAATATCTCCTGAAGGAGGG
CTTGATCGATGGCTCAGGAGTTACTGTTACCGGTAAAACAATGAAGGAAA
ATGTAGCCTCATGGCCTGATTTTCCTGCTGACCAGGATATCATCCGCCCC
CTCAACAACCCTATCAAACCATCTGGCCATCTCCAGATTCTTCGCGGATC
GCTGGCCCCGGGCGGTTCCGTGGGTAAGATTACTGGAAAGGAGGGTCTGC
GGTTTGAGGGTATAGCTAAATGCTATGATTACGAAGATGCATTCATTGAG
TCCCTTGAGCGGGGTGAGATCAAGAAGGGCGAGAAAACAGTCGTGATTAT
CCGGTATGAAGGCCCCAAGGGTGGCCCAGGAATGCCTGAGATGCTCAAGC
CCAGCGCGGCCATTATGGGCGCTGGACTTGGCCAGGACGTTGCTCTTCTT
ACAGATGGAAGATTCTCGGGTGGCAGTCACGGATTTTTGATCGGACATAT
CGTGCCGGAAGCCATGGAAGGCGGCCCGATCGCGTTGGCTCGAGACGGTG
ATCGGATCGTGATTGATGCTGAGGAAAGAGTGGTCGATCTGGATATCTCT
ACTGAGGAGCTCGAGAAGAGGAGGAAGGAGTGGAACGCACCCCCGCTCCG
GTACCAGAAGGGAACTCTGAAGAAATATTGCACGCTGGTCAGCGACGCCA
GCCATGGTTGTGTCACGGACGGACCGATATAGATGTTCGCGTCGAGTATC
CGATCGAGAGCTCTGGGATTGAGCCCACGAGCCCGGTTTGAGAATACTCG
TCTTCCATCTTCCACTAGCGGGCGCCGTTATAGATCCGATGAGCCCCTCA
ACCGAATTTCCTCGAAAATCACACAACCCAAATCCCAGGGTGCTTCGCAA
GCAATGCTCTACGCCACCGGCCTAACAGAGGAAGACATGTCCAAGCCACA
GGTCGGTATCTCCTCGGTGTGGTTCGAGGGTAACCCATGCAACATGCACT
TGCATGACCTGTCTGCCATTGTGCGCGATTCCGTGCTCCGTGCGGGTCTG
GTCCCTATGCGATTCAACTCAGTTGGAGTGTCGGATGGGATCAGTATGGG
TACAAAGGGAATGAGATACAGCCTGCAGAGCCGGGAGCTGATCGCTGATG
GTATTGAGACGGTGATGAATGCCCAGTGGTACGATGCGAATGTGTCGCTC
CCGGGTTGTGATAAGAATATGCCAGGTGTATTAATAGCGATGGGACGCAC
GAACCGACCTAGCATCATGGTCTACGGTGGCAGTATCAAGCCTGGATGCA
GTGCAAAGGGCCAGAAATTGGACCTGGTCAGTGCATTCCAGTCATATGGC
CAGTTCATCACCGGCCAGATCGACGAGAAGGAGCGGTTCGATATCATTCG
CAATGCATGCCCCGGCAGAGGTGCATGCGGTGGCATGTACACGGCTAATA
CGCTGGCCACGGCTATTGAGACTATGGGAATGACTATTCCTGGTAGTAGT
AGTTGCCCGGCAGATGATCGCAAGAAGCTAGTTGAGTGCGAAAATATTGG
CGAGGTGGTTAAAAATATGCTCAGGGAAGATATCAAACCCAGGGATATCT
TAACACGTCAAGCCTTCGAGAATGCAATGATTGTAGTGAACGTGCTGGGT
GGCAGTACTAATGCTGTTTTACATCTGATTGCCATTGCTGACTCTGTCGG
TATCAAGTTGACTATTGATGACTTCCAGGCAGTATCTGATAAGACACCGT
TCCTGGCTGATTTGAAGCCATCTGGAAAGTATCTTATGAATGATCTTTAT
AATATCGGTGGCACACCAGCCCTCCTGAAATATCTCCTGAAGGAGGGCTT
GATCGATGGCTCAGGAGTTACTGTTACCGGTAAAACAATGAAGGAAAATG
TAGCCTCATGGCCTGATTTTCCTGCTGACCAGGATATCATCCGCCCCCTC
AACAACCCTATCAAACCATCTGGCCATCTCCAGATTCTTCGCGGATCGCT
GGCCCCGGGCGGTTCCGTGGGTAAGATTACTGGAAAGGAGGGTCTGCGGT
TTGAGGGTATAGCTAAATGCTATGATTACGAAGATGCATTCATTGAGTCC
CTTGAGCGGGGTGAGATCAAGAAGGGCGAGAAAACAGTCGTGATTATCCG
GTATGAAGGCCCCAAGGGTGGCCCAGGAATGCCTGAGATGCTCAAGCCCA
GCGCGGCCATTATGGGCGCTGGACTTGGCCAGGACGTTGCTCTTCTTACA
GATGGAAGATTCTCGGGTGGCAGTCACGGATTTTTGATCGGACATATCGT
GCCGGAAGCCATGGAAGGCGGCCCGATCGCGTTGGCTCGAGACGGTGATC
GGATCGTGATTGATGCTGAGGAAAGAGTGGTCGATCTGGATATCTCTACT
GAGGAGCTCGAGAAGAGGAGGAAGGAGTGGAACGCACCCCCGCTCCGGTA
CCAGAAGGGAACTCTGAAGAAATATTGCACGCTGGTCAGCGACGCCAGCC
ATGGTTGTGTCACGGACGGACCGATATAGATGTTCGCGTCGAGTATCCGA
TCGAGAGCTCTGGGATTGAGCCCACGAGCCCGGTTTGAGAATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004160dihydroxy-acid dehydratase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010868CBS51388_010868Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010868-T1CBS51388_010868-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010868-T1.cdsCBS51388_010868-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010868-T1.exon2CBS51388_010868-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010868-T1.exon1CBS51388_010868-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR037237
DBxrefInterPro:IPR020558
DBxrefInterPro:IPR004404
DBxrefInterPro:IPR042096
DBxrefInterPro:IPR000581
DBxrefPFAM:PF00920
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:539374..541248 -
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