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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:581602..582531+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010882-T1 ID=CBS51388_010882-T1|Name=CBS51388_010882-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=930bp|location=Sequence derived from alignment at An18:581602..582531+ (Aspergillus niger CBS 513.88)
ATGACGTCCTTGCAGCCCATCAAGCTTTTCTGGAGAAGTATGTTTCCGTC
TCCTTAATTTACCTTTGAGAGTGAAATGCACACTACGTCCAAGGAAAGCA
ATGCTAAAAAGCGGGAAAACAAAATCTAGACCAAGTACCCAACCCCTCCA
AAGTCCTCATCATTCTCGAGGAGCTTAATCTTCCTTACGAGTCCTCTTGG
GTCGAACTCGACGGTTTGAAAACCAAGCCCTTCACCGATGTGAACCCTAA
CGGCCGAGTGCCCGGTATGTAGCTCCCATGCCTTTCCAACACGCCACCAT
TAATATTATCGCGGGTCCTAATGAATATCGATAGCTATCATTGACCCCAA
CACCGGTCTTACCCTCTGGGAATCCGGTGCCATCGTCCAGTACCTCATCG
ATACCTACGACAAAGACCGCAAAATTTCCTACGCTACATTCCCAGAACAA
TACCAATTGATCCAGTGGTCTTACTTCCAGGCCTCAGGACAAGGTCCCTA
CTTTGGACAATCCGCATGGTGAGTTAAAGGGTTCCTCGCAATGTCCACCC
ACCAATTCTCGTATACAGCTCTAACACAATTTCACGTCTTTATTGATAGG
TTCAATATCTTCCACGAGAAAGTCTATGGTGAATCCCCCGAAAGCGCCAA
GGTGCGCTACGGTGCCGAGGTCAAGCGTGTAGCGGGCGTGTTGGACTCCG
TTCTGAAGGAGCGCGATTGGCTCGTGGGCGACAAGTGCACGTACGCAGAC
CTGGCGTTTGTCATGTGGAATACACAGATTGCGTTTTTTATGGGTAGCCG
TGAAGGCGATCAGGCGTGGCGTCCTGAGGAGTTTCCTCATTTCAAACGGT
GGCAGGAAGCCATGCTGGCTCGGGAGTCGGTCAAAAAGGTGATGGGAGAA
TTGATGGATAAAGAGGTGAAGAGCTCTTGA back to topCoding sequence (CDS) from alignment at An18:581602..582531+ >CBS51388_010882-T1 ID=CBS51388_010882-T1|Name=CBS51388_010882-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2748bp|location=Sequence derived from alignment at An18:581602..582531+ (Aspergillus niger CBS 513.88)
ATGACGTCCTTGCAGCCCATCAAGCTTTTCTGGAGAAACCAAGTACCCAA
CCCCTCCAAAGTCCTCATCATTCTCGAGGAGCTTAATCTTCCTTACGAGT
CCTCTTGGGTCGAACTCGACGGTTTGAAAACCAAGCCCTTCACCGATGTG
AACCCTAACGGCCGAGTGCCCGCTATCATTGACCCCAACACCGGTCTTAC
CCTCTGGGAATCCGGTGCCATCGTCCAGTACCTCATCGATACCTACGACA
AAGACCGCAAAATTTCCTACGCTACATTCCCAGAACAATACCAATTGATC
CAGTGGTCTTACTTCCAGGCCTCAGGACAAGGTCCCTACTTTGGACAATC
CGCATGGTTCAATATCTTCCACGAGAAAGTCTATGGTGAATCCCCCGAAA
GCGCCAAGGTGCGCTACGGTGCCGAGGTCAAGCGTGTAGCGGGCGTGTTG
GACTCCGTTCTGAAGGAGCGCGATTGGCTCGTGGGCGACAAGTGCACGTA
CGCAGACCTGGCGTTTGTCATGTGGAATACACAGATTGCGTTTTTTATGG
GTAGCCGTGAAGGCGATCAGGCGTGGCGTCCTGAGGAGTTTCCTCATTTC
AAACGGTGGCAGGAAGCCATGCTGGCTCGGGAGTCGGTCAAAAAGGTGAT
GGGAGAATTGATGGATAAAGAGGTGAAGAGCTCTTGAATGACGTCCTTGC
AGCCCATCAAGCTTTTCTGGAGAAACCAAGTACCCAACCCCTCCAAAGTC
CTCATCATTCTCGAGGAGCTTAATCTTCCTTACGAGTCCTCTTGGGTCGA
ACTCGACGGTTTGAAAACCAAGCCCTTCACCGATGTGAACCCTAACGGCC
GAGTGCCCGCTATCATTGACCCCAACACCGGTCTTACCCTCTGGGAATCC
GGTGCCATCGTCCAGTACCTCATCGATACCTACGACAAAGACCGCAAAAT
TTCCTACGCTACATTCCCAGAACAATACCAATTGATCCAGTGGTCTTACT
TCCAGGCCTCAGGACAAGGTCCCTACTTTGGACAATCCGCATGGTTCAAT
ATCTTCCACGAGAAAGTCTATGGTGAATCCCCCGAAAGCGCCAAGGTGCG
CTACGGTGCCGAGGTCAAGCGTGTAGCGGGCGTGTTGGACTCCGTTCTGA
AGGAGCGCGATTGGCTCGTGGGCGACAAGTGCACGTACGCAGACCTGGCG
TTTGTCATGTGGAATACACAGATTGCGTTTTTTATGGGTAGCCGTGAAGG
CGATCAGGCGTGGCGTCCTGAGGAGTTTCCTCATTTCAAACGGTGGCAGG
AAGCCATGCTGGCTCGGGAGTCGGTCAAAAAGGTGATGGGAGAATTGATG
GATAAAGAGGTGAAGAGCTCTTGAATGACGTCCTTGCAGCCCATCAAGCT
TTTCTGGAGAAACCAAGTACCCAACCCCTCCAAAGTCCTCATCATTCTCG
AGGAGCTTAATCTTCCTTACGAGTCCTCTTGGGTCGAACTCGACGGTTTG
AAAACCAAGCCCTTCACCGATGTGAACCCTAACGGCCGAGTGCCCGCTAT
CATTGACCCCAACACCGGTCTTACCCTCTGGGAATCCGGTGCCATCGTCC
AGTACCTCATCGATACCTACGACAAAGACCGCAAAATTTCCTACGCTACA
TTCCCAGAACAATACCAATTGATCCAGTGGTCTTACTTCCAGGCCTCAGG
ACAAGGTCCCTACTTTGGACAATCCGCATGGTTCAATATCTTCCACGAGA
AAGTCTATGGTGAATCCCCCGAAAGCGCCAAGGTGCGCTACGGTGCCGAG
GTCAAGCGTGTAGCGGGCGTGTTGGACTCCGTTCTGAAGGAGCGCGATTG
GCTCGTGGGCGACAAGTGCACGTACGCAGACCTGGCGTTTGTCATGTGGA
ATACACAGATTGCGTTTTTTATGGGTAGCCGTGAAGGCGATCAGGCGTGG
CGTCCTGAGGAGTTTCCTCATTTCAAACGGTGGCAGGAAGCCATGCTGGC
TCGGGAGTCGGTCAAAAAGGTGATGGGAGAATTGATGGATAAAGAGGTGA
AGAGCTCTTGAATGACGTCCTTGCAGCCCATCAAGCTTTTCTGGAGAAAC
CAAGTACCCAACCCCTCCAAAGTCCTCATCATTCTCGAGGAGCTTAATCT
TCCTTACGAGTCCTCTTGGGTCGAACTCGACGGTTTGAAAACCAAGCCCT
TCACCGATGTGAACCCTAACGGCCGAGTGCCCGCTATCATTGACCCCAAC
ACCGGTCTTACCCTCTGGGAATCCGGTGCCATCGTCCAGTACCTCATCGA
TACCTACGACAAAGACCGCAAAATTTCCTACGCTACATTCCCAGAACAAT
ACCAATTGATCCAGTGGTCTTACTTCCAGGCCTCAGGACAAGGTCCCTAC
TTTGGACAATCCGCATGGTTCAATATCTTCCACGAGAAAGTCTATGGTGA
ATCCCCCGAAAGCGCCAAGGTGCGCTACGGTGCCGAGGTCAAGCGTGTAG
CGGGCGTGTTGGACTCCGTTCTGAAGGAGCGCGATTGGCTCGTGGGCGAC
AAGTGCACGTACGCAGACCTGGCGTTTGTCATGTGGAATACACAGATTGC
GTTTTTTATGGGTAGCCGTGAAGGCGATCAGGCGTGGCGTCCTGAGGAGT
TTCCTCATTTCAAACGGTGGCAGGAAGCCATGCTGGCTCGGGAGTCGGTC
AAAAAGGTGATGGGAGAATTGATGGATAAAGAGGTGAAGAGCTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR004046 |
| DBxref | InterPro:IPR004045 |
| DBxref | InterPro:IPR036249 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF14497 |
| DBxref | PFAM:PF00043 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:581602..582531 + |
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