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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:681043..682546+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010910-T1 ID=CBS51388_010910-T1|Name=CBS51388_010910-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1504bp|location=Sequence derived from alignment at An18:681043..682546+ (Aspergillus niger CBS 513.88)
ATGTCGATGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGT
GGGTAAGGCTCTTCCTGCTCCCGTCTCTTACCTTCTATACTCGTGAAATA
TGTCTTGACACCTGTCAGCGACTTCCAAGGGGTTTCGCATCTTCACCACG
GACCCTTTCGCGAAAAGCTATGAGACGAAGGAAGGGAATATTGCCATCAT
TGAGATGCTATTCTCGACGTCCCTGGTTGCGCTGATACTATCACCACGTC
GCCTTCAAATAACTAATACCAAGGTTCGTAGGATGTCCTTCGCGCATTAT
GTTAGATTCTACCTTTTCAATAATCGCATAACTTCTCCCCTGTATTCTGT
TGCGCGATTCACGAGGCGCAAATGGTTAACGCTTTTTCTCACATCTGCAA
CATATAGCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGC
TGGCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAG
ATTTACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGAC
CTCTCCCAATCCCAACGGTAAGGCTGCGACTACATTTGGATGTGGATGTG
CTAGATTGTCTAACTGCTGGCAGCACTATGTGCCCTCTCCCCATCCTCCG
ATAACTGCTATCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACG
TTCCAACCTCCAGCTCACGCTCCTCCGGGGACGACTCATGTTACACCTAC
AAGTGGCGAGGTCTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACG
TTATTGAAGCGCATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGAT
GGAACCCTTATAGCCACGGCATCGGACAAGGGAACTATCATACGGGTATT
CTCTGTCCCCGACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATAC
CATCCAGAATCTACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGT
GTATCTTCTTCCACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATC
ACAGTCACCGGACGCCACACCATCCTCTTCACTTACAGCCGCTGATCGAA
GGTCTAGCCAAAGCTCATTGGGGCAATTGTCTGACGCCGATGACAGGGTT
GGAGATATGGGCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCT
GATGGGCATGATCCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTG
CCAAGGTTGGAGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCC
GCCCGAGACTTCGCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGG
AGCAAATGGGAACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCA
ACACTCCCCAGGTTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTC
AACATCGATCTCTCCAAGGGTGGTGAGGGGACGTTGACTAAACAATACTC
GTGA back to topCoding sequence (CDS) from alignment at An18:681043..682546+ >CBS51388_010910-T1 ID=CBS51388_010910-T1|Name=CBS51388_010910-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4992bp|location=Sequence derived from alignment at An18:681043..682546+ (Aspergillus niger CBS 513.88)
ATGTCGATGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGT
GGCGACTTCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCGCGAAAA
GCTATGAGACGAAGGAAGGGAATATTGCCATCATTGAGATGCTATTCTCG
ACGTCCCTGGTTGCGCTGATACTATCACCACGTCGCCTTCAAATAACTAA
TACCAAGCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGC
TGGCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAG
ATTTACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGAC
CTCTCCCAATCCCAACGCACTATGTGCCCTCTCCCCATCCTCCGATAACT
GCTATCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAA
CCTCCAGCTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAAGTGG
CGAGGTCTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTTATTG
AAGCGCATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGGAACC
CTTATAGCCACGGCATCGGACAAGGGAACTATCATACGGGTATTCTCTGT
CCCCGACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCA
GAATCTACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGTATCT
TCTTCCACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCACAGTC
ACCGGACGCCACACCATCCTCTTCACTTACAGCCGCTGATCGAAGGTCTA
GCCAAAGCTCATTGGGGCAATTGTCTGACGCCGATGACAGGGTTGGAGAT
ATGGGCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGATGGG
CATGATCCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGG
TTGGAGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGA
GACTTCGCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAA
TGGGAACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTC
CCCAGGTTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAACATC
GATCTCTCCAAGGGTGGTGAGGGGACGTTGACTAAACAATACTCGTGAAT
GTCGATGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGTGG
CGACTTCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCGCGAAAAGC
TATGAGACGAAGGAAGGGAATATTGCCATCATTGAGATGCTATTCTCGAC
GTCCCTGGTTGCGCTGATACTATCACCACGTCGCCTTCAAATAACTAATA
CCAAGCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGCTG
GCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGAT
TTACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGACCT
CTCCCAATCCCAACGCACTATGTGCCCTCTCCCCATCCTCCGATAACTGC
TATCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAACC
TCCAGCTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAAGTGGCG
AGGTCTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTTATTGAA
GCGCATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGGAACCCT
TATAGCCACGGCATCGGACAAGGGAACTATCATACGGGTATTCTCTGTCC
CCGACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCAGA
ATCTACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGTATCTTC
TTCCACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCACAGTCAC
CGGACGCCACACCATCCTCTTCACTTACAGCCGCTGATCGAAGGTCTAGC
CAAAGCTCATTGGGGCAATTGTCTGACGCCGATGACAGGGTTGGAGATAT
GGGCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGATGGGCA
TGATCCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGGTT
GGAGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGAGA
CTTCGCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAATG
GGAACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTCCC
CAGGTTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAACATCGA
TCTCTCCAAGGGTGGTGAGGGGACGTTGACTAAACAATACTCGTGAATGT
CGATGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGTGGCG
ACTTCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCGCGAAAAGCTA
TGAGACGAAGGAAGGGAATATTGCCATCATTGAGATGCTATTCTCGACGT
CCCTGGTTGCGCTGATACTATCACCACGTCGCCTTCAAATAACTAATACC
AAGCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGCTGGC
AGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGATTT
ACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGACCTCT
CCCAATCCCAACGCACTATGTGCCCTCTCCCCATCCTCCGATAACTGCTA
TCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAACCTC
CAGCTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAAGTGGCGAG
GTCTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTTATTGAAGC
GCATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGGAACCCTTA
TAGCCACGGCATCGGACAAGGGAACTATCATACGGGTATTCTCTGTCCCC
GACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCAGAAT
CTACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGTATCTTCTT
CCACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCACAGTCACCG
GACGCCACACCATCCTCTTCACTTACAGCCGCTGATCGAAGGTCTAGCCA
AAGCTCATTGGGGCAATTGTCTGACGCCGATGACAGGGTTGGAGATATGG
GCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGATGGGCATG
ATCCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGGTTGG
AGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGAGACT
TCGCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAATGGG
AACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTCCCCA
GGTTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAACATCGATC
TCTCCAAGGGTGGTGAGGGGACGTTGACTAAACAATACTCGTGAATGTCG
ATGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGTGGCGAC
TTCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCGCGAAAAGCTATG
AGACGAAGGAAGGGAATATTGCCATCATTGAGATGCTATTCTCGACGTCC
CTGGTTGCGCTGATACTATCACCACGTCGCCTTCAAATAACTAATACCAA
GCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGCTGGCAG
TGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGATTTAC
CTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGACCTCTCC
CAATCCCAACGCACTATGTGCCCTCTCCCCATCCTCCGATAACTGCTATC
TGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAACCTCCA
GCTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAAGTGGCGAGGT
CTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTTATTGAAGCGC
ATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGGAACCCTTATA
GCCACGGCATCGGACAAGGGAACTATCATACGGGTATTCTCTGTCCCCGA
CGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCAGAATCT
ACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGTATCTTCTTCC
ACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCACAGTCACCGGA
CGCCACACCATCCTCTTCACTTACAGCCGCTGATCGAAGGTCTAGCCAAA
GCTCATTGGGGCAATTGTCTGACGCCGATGACAGGGTTGGAGATATGGGC
TCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGATGGGCATGAT
CCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGGTTGGAG
GCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGAGACTTC
GCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAATGGGAA
CAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTCCCCAGG
TTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAACATCGATCTC
TCCAAGGGTGGTGAGGGGACGTTGACTAAACAATACTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | autophagy protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:681043..682546 + |
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