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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:686504..687817+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010912-T1 ID=CBS51388_010912-T1|Name=CBS51388_010912-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1314bp|location=Sequence derived from alignment at An18:686504..687817+ (Aspergillus niger CBS 513.88)
ATGCTCCCACCCCCCGATGACCCCGACTCTACCACCGACACAACAATCAC
GTCCACCAGATCACCCCTCCCCCTCACCACCGACAATGCCACCACCACCA
CGAAGAACCAGAACAACCACCACCACCCCCGCAAACCAAAACCCACGCTC
CTCAACCCCCTTCAAAAAGGTATCACAACCTACCTAACCCACCACCACAC
CGATGCGACCCTCCCCCCCTCCTCCCTTCCCAAACGCTTCACCATCTACG
CCCCCCTCCTCCTCCTTCCCGTCAACGCCCTCACGACCCCACCCGCCTGG
CACACCCTCTATGCCTCCCTAACCGCATCTCAAAGGACCACTCTCTACGA
ATGCATTCTCTCCGCCTTCTCGCGCTACAACCTCACCCACATCGCCATCA
ACGCCCCCATCGCATTAACCGACGCGCAAGGCACCGAGAACCGCATGCGC
AGTCCCGGCGGCTTACACCCACTACACGGGGATTTTGGGCCCTCGCCCAG
CACAATCGTGAATCTGGATGCGCCAACAGCGGAGGACCTGGGGCGTGCGT
TGTGGGTGAGTACGGTGCAGAACCATGGCATTGAGCAGTTTTGGGCACCT
ATGTATACGATGTTCTCGAGGGGGAATGTTACGGAGAAGGCAAGGATATT
GGATGGCATGGAGGGGTTGCGGAGGGAGGATATGGAGGGGGCAGGGATGA
GTGTGGTGGATATGTATGCGGGGATTGGGTATTTTGTGTTTTCGTACCTG
AGGCGGGGGGTGCAAAGGGTTTGGGGGTGGGAGATTAATGGCTGGTCCGT
GGAGGGGTTGCGGAGGGGGTGTATGGCTAATGGGTGGGGGTGTAGGGTTG
TTAAGATTGATGGTGATGGGGTGTTAGAGGGTGGTATGGGGGTGAAGGAG
TTGGTGGATGGGTTGAGGGATGAGGATAGGGTGGTGGTGTTTCATGGGGA
TAATCGGTTTGCGGCGCGTGTTTTGGCACAGATCAGGCATGTGATGGAGG
CGCGCGGGCGGTGGGCGCCTGTCAGGCATGTTAATTTGGGCTTGTTGCCC
TCGTCGGCGGCTGCTTGGGGGGCTGCGTGTCGGATGGTGGATGGACGGTT
GGGGGGTTGGCTGCATGTGCATGAGAATGTGGATGTGCGGCGCATTGAGG
AGATGGGGGATCATATCACGAAGGAGATTGGGAGGTTAAGGGCCACGGCT
TTGGAGGTTGAAGATGTGGTGGCGGAGTGTCGGCATGTTGAACAGGTCAA
GACTTACGCTCCGGGGGTGATGCATTGCGTGTTTGATGTCAAGATGCCGG
CACTGGAGCTATAA back to topCoding sequence (CDS) from alignment at An18:686504..687817+ >CBS51388_010912-T1 ID=CBS51388_010912-T1|Name=CBS51388_010912-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1314bp|location=Sequence derived from alignment at An18:686504..687817+ (Aspergillus niger CBS 513.88)
ATGCTCCCACCCCCCGATGACCCCGACTCTACCACCGACACAACAATCAC
GTCCACCAGATCACCCCTCCCCCTCACCACCGACAATGCCACCACCACCA
CGAAGAACCAGAACAACCACCACCACCCCCGCAAACCAAAACCCACGCTC
CTCAACCCCCTTCAAAAAGGTATCACAACCTACCTAACCCACCACCACAC
CGATGCGACCCTCCCCCCCTCCTCCCTTCCCAAACGCTTCACCATCTACG
CCCCCCTCCTCCTCCTTCCCGTCAACGCCCTCACGACCCCACCCGCCTGG
CACACCCTCTATGCCTCCCTAACCGCATCTCAAAGGACCACTCTCTACGA
ATGCATTCTCTCCGCCTTCTCGCGCTACAACCTCACCCACATCGCCATCA
ACGCCCCCATCGCATTAACCGACGCGCAAGGCACCGAGAACCGCATGCGC
AGTCCCGGCGGCTTACACCCACTACACGGGGATTTTGGGCCCTCGCCCAG
CACAATCGTGAATCTGGATGCGCCAACAGCGGAGGACCTGGGGCGTGCGT
TGTGGGTGAGTACGGTGCAGAACCATGGCATTGAGCAGTTTTGGGCACCT
ATGTATACGATGTTCTCGAGGGGGAATGTTACGGAGAAGGCAAGGATATT
GGATGGCATGGAGGGGTTGCGGAGGGAGGATATGGAGGGGGCAGGGATGA
GTGTGGTGGATATGTATGCGGGGATTGGGTATTTTGTGTTTTCGTACCTG
AGGCGGGGGGTGCAAAGGGTTTGGGGGTGGGAGATTAATGGCTGGTCCGT
GGAGGGGTTGCGGAGGGGGTGTATGGCTAATGGGTGGGGGTGTAGGGTTG
TTAAGATTGATGGTGATGGGGTGTTAGAGGGTGGTATGGGGGTGAAGGAG
TTGGTGGATGGGTTGAGGGATGAGGATAGGGTGGTGGTGTTTCATGGGGA
TAATCGGTTTGCGGCGCGTGTTTTGGCACAGATCAGGCATGTGATGGAGG
CGCGCGGGCGGTGGGCGCCTGTCAGGCATGTTAATTTGGGCTTGTTGCCC
TCGTCGGCGGCTGCTTGGGGGGCTGCGTGTCGGATGGTGGATGGACGGTT
GGGGGGTTGGCTGCATGTGCATGAGAATGTGGATGTGCGGCGCATTGAGG
AGATGGGGGATCATATCACGAAGGAGATTGGGAGGTTAAGGGCCACGGCT
TTGGAGGTTGAAGATGTGGTGGCGGAGTGTCGGCATGTTGAACAGGTCAA
GACTTACGCTCCGGGGGTGATGCATTGCGTGTTTGATGTCAAGATGCCGG
CACTGGAGCTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0031591 | wybutosine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR030382 |
| DBxref | InterPro:IPR026274 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:686504..687817 + |
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