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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:824153..825910- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010962-T1 ID=CBS51388_010962-T1|Name=CBS51388_010962-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1758bp|location=Sequence derived from alignment at An18:824153..825910- (Aspergillus niger CBS 513.88)
ATGGCTGCTGCTCGCGATGATCTCCGGAGCTCGATGGACGTTGACACCAA
CGATCCCCGCCTCGGCTCTCCCTCTGCCACCAACGGTGTGAATGGCACTC
ACACGGAGAAGAGTCCGACCCCGCCCCCTCACCGGTCCAATGGAAACACC
GCGGAGGCCGACTCCTTCAAGCTGGCTGGAAACAAGTTTTTCAAGGATGG
CAACTATGCCCGCGCCATTGAGGAATTTACCAAGGGTAGGTTAATACCTG
ATTCTGCCGGACAATCTTCTGCAGTGTTAGTAACAATGGTACAGCTCTCG
AGATTAGCCCCAACTCGTCCGTCTACCTGTCCAACCGGGCTGCAGCATAC
ATGGCGGCCAACCAATATCTCGCTGCTCTGGAGGACTGCGAACGGGCCTG
CGAGCTCGACCCCACCAACACTAAGATCATGTACCGGTTGGCCCGTATCC
TGACCAGCTTGGGCCGTCCGACGGAGGCTCTTGATGTGCTGTCTCGTATC
GAGCCCCCGGCCTCCGCTACTGACCGTGCGGCCGCAGAGAAGATGCTCCG
CTTCGTCAGCCAGGCGGAGGAGGCTCTTTCGCAGGACCGTGGTGTCTCAA
TGGTGCTGTTCTGCCTCGACCAGGCCCGTCAGCTCCTCGGACAAGGCGTC
AAGGAGCCCCGCAAGTGGACGCTGATGACTGCAGAGGCCCAGTTGAAGAT
GGGCAACGACAACTCGTACGGCAAGGCACAGGACATTGCTATTAGCATGC
TCCGCGTGAACAGCCAGGACCCTGATGCGCTGATGATCCGCGCCCGGGCC
TTCTACGGTATGGGTGACACGGAGCAGGCGCTGAAGCTGCTGAAGATGTG
TCTGGGTCTGGATCCGGATATGAAGGCGGCGATCAAGCTGCTGCGGACCG
TGCAGAAGCTGGTGCGCACCAAGGAAGAGGGTAACACGGCATTCAAGGCC
AAGGACTATCGTCGCGCCATCGACCTGTGGGGTGAGGCGCTGACGGTGGA
CCCGAAGAACAAGGACCAGAACGCCAAGATCCTGCAGAACCGGGCGCAGG
CCTACATCAACCTGAAGGAGTACGACAGTGCAGTGGCAGACTGCAACGAG
GCCCTGCGGCTGGACCCCGGGTACCTCAAAGCGCAGAAGATGCGCGCCAA
GGCGCACGGCGGTGCCGGCAATTGGGAAGAAGCTGTGCGCGACTACAAGG
CGGTGGCGGAGTCGAACCCGACCGAGAAGGGCATCCAAGAGGAAATCCGT
CGGGCCGAGTTTGAGCTGAAGAAGGCGCAGCGCAAGGATTACTACAAGAT
CCTCGGAGTGTCCAAGGACGCGGGCGAGCAAGAGATCAAGAAGGCGTACC
GCAAGATGGCGATCCAGTACCACCCGGACAAGAACCGGGACGGGGATGCG
GGTGACGAGAAGTTCAAGGAGATTGGTGAGGCGTACGAGACTTTGAGTGA
TCCTCAGTAAGTTCATCCTTTGATGTGGTGATGAGTGGCTTTCGCTAACC
AAGCATAGGAAACGTGCTGCCTACGACAACGGCGATGACCTGATGGACCC
AGCTGACATGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGCG
GTATGGGCGGAATGGGCGGAATGGGTGGTATGGGCGGTATGGGAGGAACC
CATATCAACATCGACCCCAGCGTGCTGTTCAACATGATGAACGGCGGCGG
CGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTCCCCGGCGGATTTC
CCTTTTAG back to topCoding sequence (CDS) from alignment at An18:824153..825910- >CBS51388_010962-T1 ID=CBS51388_010962-T1|Name=CBS51388_010962-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4941bp|location=Sequence derived from alignment at An18:824153..825910- (Aspergillus niger CBS 513.88)
GAAACGTGCTGCCTACGACAACGGCGATGACCTGATGGACCCAGCTGACA
TGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGCGGTATGGGC
GGAATGGGCGGAATGGGTGGTATGGGCGGTATGGGAGGAACCCATATCAA
CATCGACCCCAGCGTGCTGTTCAACATGATGAACGGCGGCGGCGGATTTG
CGCACGCAGGAGGACAGCGCGGAGGATTCCCCGGCGGATTTCCCTTTTAG
CTCTCGAGATTAGCCCCAACTCGTCCGTCTACCTGTCCAACCGGGCTGCA
GCATACATGGCGGCCAACCAATATCTCGCTGCTCTGGAGGACTGCGAACG
GGCCTGCGAGCTCGACCCCACCAACACTAAGATCATGTACCGGTTGGCCC
GTATCCTGACCAGCTTGGGCCGTCCGACGGAGGCTCTTGATGTGCTGTCT
CGTATCGAGCCCCCGGCCTCCGCTACTGACCGTGCGGCCGCAGAGAAGAT
GCTCCGCTTCGTCAGCCAGGCGGAGGAGGCTCTTTCGCAGGACCGTGGTG
TCTCAATGGTGCTGTTCTGCCTCGACCAGGCCCGTCAGCTCCTCGGACAA
GGCGTCAAGGAGCCCCGCAAGTGGACGCTGATGACTGCAGAGGCCCAGTT
GAAGATGGGCAACGACAACTCGTACGGCAAGGCACAGGACATTGCTATTA
GCATGCTCCGCGTGAACAGCCAGGACCCTGATGCGCTGATGATCCGCGCC
CGGGCCTTCTACGGTATGGGTGACACGGAGCAGGCGCTGAAGCTGCTGAA
GATGTGTCTGGGTCTGGATCCGGATATGAAGGCGGCGATCAAGCTGCTGC
GGACCGTGCAGAAGCTGGTGCGCACCAAGGAAGAGGGTAACACGGCATTC
AAGGCCAAGGACTATCGTCGCGCCATCGACCTGTGGGGTGAGGCGCTGAC
GGTGGACCCGAAGAACAAGGACCAGAACGCCAAGATCCTGCAGAACCGGG
CGCAGGCCTACATCAACCTGAAGGAGTACGACAGTGCAGTGGCAGACTGC
AACGAGGCCCTGCGGCTGGACCCCGGGTACCTCAAAGCGCAGAAGATGCG
CGCCAAGGCGCACGGCGGTGCCGGCAATTGGGAAGAAGCTGTGCGCGACT
ACAAGGCGGTGGCGGAGTCGAACCCGACCGAGAAGGGCATCCAAGAGGAA
ATCCGTCGGGCCGAGTTTGAGCTGAAGAAGGCGCAGCGCAAGGATTACTA
CAAGATCCTCGGAGTGTCCAAGGACGCGGGCGAGCAAGAGATCAAGAAGG
CGTACCGCAAGATGGCGATCCAGTACCACCCGGACAAGAACCGGGACGGG
GATGCGGGTGACGAGAAGTTCAAGGAGATTGGTGAGGCGTACGAGACTTT
GAGTGATCCTCAATGGCTGCTGCTCGCGATGATCTCCGGAGCTCGATGGA
CGTTGACACCAACGATCCCCGCCTCGGCTCTCCCTCTGCCACCAACGGTG
TGAATGGCACTCACACGGAGAAGAGTCCGACCCCGCCCCCTCACCGGTCC
AATGGAAACACCGCGGAGGCCGACTCCTTCAAGCTGGCTGGAAACAAGTT
TTTCAAGGATGGCAACTATGCCCGCGCCATTGAGGAATTTACCAAGGGAA
ACGTGCTGCCTACGACAACGGCGATGACCTGATGGACCCAGCTGACATGT
TCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGCGGTATGGGCGGA
ATGGGCGGAATGGGTGGTATGGGCGGTATGGGAGGAACCCATATCAACAT
CGACCCCAGCGTGCTGTTCAACATGATGAACGGCGGCGGCGGATTTGCGC
ACGCAGGAGGACAGCGCGGAGGATTCCCCGGCGGATTTCCCTTTTAGCTC
TCGAGATTAGCCCCAACTCGTCCGTCTACCTGTCCAACCGGGCTGCAGCA
TACATGGCGGCCAACCAATATCTCGCTGCTCTGGAGGACTGCGAACGGGC
CTGCGAGCTCGACCCCACCAACACTAAGATCATGTACCGGTTGGCCCGTA
TCCTGACCAGCTTGGGCCGTCCGACGGAGGCTCTTGATGTGCTGTCTCGT
ATCGAGCCCCCGGCCTCCGCTACTGACCGTGCGGCCGCAGAGAAGATGCT
CCGCTTCGTCAGCCAGGCGGAGGAGGCTCTTTCGCAGGACCGTGGTGTCT
CAATGGTGCTGTTCTGCCTCGACCAGGCCCGTCAGCTCCTCGGACAAGGC
GTCAAGGAGCCCCGCAAGTGGACGCTGATGACTGCAGAGGCCCAGTTGAA
GATGGGCAACGACAACTCGTACGGCAAGGCACAGGACATTGCTATTAGCA
TGCTCCGCGTGAACAGCCAGGACCCTGATGCGCTGATGATCCGCGCCCGG
GCCTTCTACGGTATGGGTGACACGGAGCAGGCGCTGAAGCTGCTGAAGAT
GTGTCTGGGTCTGGATCCGGATATGAAGGCGGCGATCAAGCTGCTGCGGA
CCGTGCAGAAGCTGGTGCGCACCAAGGAAGAGGGTAACACGGCATTCAAG
GCCAAGGACTATCGTCGCGCCATCGACCTGTGGGGTGAGGCGCTGACGGT
GGACCCGAAGAACAAGGACCAGAACGCCAAGATCCTGCAGAACCGGGCGC
AGGCCTACATCAACCTGAAGGAGTACGACAGTGCAGTGGCAGACTGCAAC
GAGGCCCTGCGGCTGGACCCCGGGTACCTCAAAGCGCAGAAGATGCGCGC
CAAGGCGCACGGCGGTGCCGGCAATTGGGAAGAAGCTGTGCGCGACTACA
AGGCGGTGGCGGAGTCGAACCCGACCGAGAAGGGCATCCAAGAGGAAATC
CGTCGGGCCGAGTTTGAGCTGAAGAAGGCGCAGCGCAAGGATTACTACAA
GATCCTCGGAGTGTCCAAGGACGCGGGCGAGCAAGAGATCAAGAAGGCGT
ACCGCAAGATGGCGATCCAGTACCACCCGGACAAGAACCGGGACGGGGAT
GCGGGTGACGAGAAGTTCAAGGAGATTGGTGAGGCGTACGAGACTTTGAG
TGATCCTCAATGGCTGCTGCTCGCGATGATCTCCGGAGCTCGATGGACGT
TGACACCAACGATCCCCGCCTCGGCTCTCCCTCTGCCACCAACGGTGTGA
ATGGCACTCACACGGAGAAGAGTCCGACCCCGCCCCCTCACCGGTCCAAT
GGAAACACCGCGGAGGCCGACTCCTTCAAGCTGGCTGGAAACAAGTTTTT
CAAGGATGGCAACTATGCCCGCGCCATTGAGGAATTTACCAAGGGAAACG
TGCTGCCTACGACAACGGCGATGACCTGATGGACCCAGCTGACATGTTCT
CGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGCGGTATGGGCGGAATG
GGCGGAATGGGTGGTATGGGCGGTATGGGAGGAACCCATATCAACATCGA
CCCCAGCGTGCTGTTCAACATGATGAACGGCGGCGGCGGATTTGCGCACG
CAGGAGGACAGCGCGGAGGATTCCCCGGCGGATTTCCCTTTTAGCTCTCG
AGATTAGCCCCAACTCGTCCGTCTACCTGTCCAACCGGGCTGCAGCATAC
ATGGCGGCCAACCAATATCTCGCTGCTCTGGAGGACTGCGAACGGGCCTG
CGAGCTCGACCCCACCAACACTAAGATCATGTACCGGTTGGCCCGTATCC
TGACCAGCTTGGGCCGTCCGACGGAGGCTCTTGATGTGCTGTCTCGTATC
GAGCCCCCGGCCTCCGCTACTGACCGTGCGGCCGCAGAGAAGATGCTCCG
CTTCGTCAGCCAGGCGGAGGAGGCTCTTTCGCAGGACCGTGGTGTCTCAA
TGGTGCTGTTCTGCCTCGACCAGGCCCGTCAGCTCCTCGGACAAGGCGTC
AAGGAGCCCCGCAAGTGGACGCTGATGACTGCAGAGGCCCAGTTGAAGAT
GGGCAACGACAACTCGTACGGCAAGGCACAGGACATTGCTATTAGCATGC
TCCGCGTGAACAGCCAGGACCCTGATGCGCTGATGATCCGCGCCCGGGCC
TTCTACGGTATGGGTGACACGGAGCAGGCGCTGAAGCTGCTGAAGATGTG
TCTGGGTCTGGATCCGGATATGAAGGCGGCGATCAAGCTGCTGCGGACCG
TGCAGAAGCTGGTGCGCACCAAGGAAGAGGGTAACACGGCATTCAAGGCC
AAGGACTATCGTCGCGCCATCGACCTGTGGGGTGAGGCGCTGACGGTGGA
CCCGAAGAACAAGGACCAGAACGCCAAGATCCTGCAGAACCGGGCGCAGG
CCTACATCAACCTGAAGGAGTACGACAGTGCAGTGGCAGACTGCAACGAG
GCCCTGCGGCTGGACCCCGGGTACCTCAAAGCGCAGAAGATGCGCGCCAA
GGCGCACGGCGGTGCCGGCAATTGGGAAGAAGCTGTGCGCGACTACAAGG
CGGTGGCGGAGTCGAACCCGACCGAGAAGGGCATCCAAGAGGAAATCCGT
CGGGCCGAGTTTGAGCTGAAGAAGGCGCAGCGCAAGGATTACTACAAGAT
CCTCGGAGTGTCCAAGGACGCGGGCGAGCAAGAGATCAAGAAGGCGTACC
GCAAGATGGCGATCCAGTACCACCCGGACAAGAACCGGGACGGGGATGCG
GGTGACGAGAAGTTCAAGGAGATTGGTGAGGCGTACGAGACTTTGAGTGA
TCCTCAATGGCTGCTGCTCGCGATGATCTCCGGAGCTCGATGGACGTTGA
CACCAACGATCCCCGCCTCGGCTCTCCCTCTGCCACCAACGGTGTGAATG
GCACTCACACGGAGAAGAGTCCGACCCCGCCCCCTCACCGGTCCAATGGA
AACACCGCGGAGGCCGACTCCTTCAAGCTGGCTGGAAACAAGTTTTTCAA
GGATGGCAACTATGCCCGCGCCATTGAGGAATTTACCAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR001440 |
| DBxref | InterPro:IPR019734 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF13181 |
| DBxref | PFAM:PF13174 |
| DBxref | PFAM:PF07719 |
| DBxref | PFAM:PF14559 |
| DBxref | PFAM:PF13432 |
| DBxref | PFAM:PF00515 |
| DBxref | PFAM:PF00226 |
| DBxref | PFAM:PF12895 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:824153..825910 - |
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