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CBS51388_010980-T1, CBS51388_010980-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010980-T1
Unique NameCBS51388_010980-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:889401..892200+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010980-T1 ID=CBS51388_010980-T1|Name=CBS51388_010980-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2800bp|location=Sequence derived from alignment at An18:889401..892200+ (Aspergillus niger CBS 513.88)
ATGGCTTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCTCCAATCT
CCCGCCACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAACTGGGAAA
CGAACCGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTTCGATGGC
GACTTCATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGCTGGTCCA
TGACCTCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACCAAGCAGC
TCGAGCCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGCAGTTTTC
AGTCGGAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGCGGGAACG
CCAGAAGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCGCTGGGAA
ACCTCATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGCTATGCCC
GTGGAGGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATCTGAAAAA
GGATGAAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTCCGGGAGC
AGAGGGAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTTGCGCGTC
ATTCGAGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGTCTGGAAA
AACAACACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCGAAGTTTG
GCATGATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAGTGTTGCC
AAGCGTGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAGTTGGCTA
TGCTATTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATCAAGTACA
TGACTGATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGACCTTGAC
AAGTATTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGCTGAACAC
AGACGTGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGCAGGGACT
TGAAGCTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTTCTCCAGA
TTCTACGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGTTTCCTGT
CGATGTTCACTTCTCGCGCACACCATGCGAGGACTATGTTGACAGCGCGG
TCAAGCAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGATATTCTT
GTGTTTATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGCTGGTTGA
TGAGCGGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATTCTTCCCA
TTTACAGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGAACGGGCT
GAGCCTGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTGAAACCAG
TCTGACAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTACTCCAAAC
TTAAGGTGTACAACCCCAAGATGGGCATGGACACTCTGCAGATCACGCCA
ATATCACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGACGTACGGG
ACCGGGCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAGAACGAGC
TATACCTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTCCAACACC
GTCCTTCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACTTTGATTT
TATGGACCCCCCACCCCAGGAGACAATCACCACATCCCTCTTCGAGCTTT
GGTCACTCGGAGCACTCGACAATCTCGGCGACCTCACACCACTAGGACGT
CGAATGACACCATTCCCAATGGACCCCCCGCTCGCGAAGCTCATCATCAC
GGCCGCAGAAACCTACGGCTGCAGCGAGGAAATGCTAACCATCGTATCTA
TGCTATCCGTCCCCAGCGTCTTCTACCGTCCCAGAGAGCGACAAGAAGAA
TCCGACGCCGCGCGCGAGAAATTCTTCGTCCCAGAATCCGACCACCTCAC
TTTACTCCACGTGTACACGCAATGGAAAGCAAACGGCTACTCCGACGGCT
GGTGCACACGCCACTTCCTCCACGCCAAGGCACTGCGGCGGGCGCGCGAA
GTCCGCGACCAGCTGCACGACATCATGACGGTGCAGAAGATGCCCTTGGT
CAGTTGCGGCACTGACTGGGACGAGATCCGCAAATGCATCTGCTCGGGTT
TCTACCACCAAGCCGCGCGCGTCAAGGGTATCGGCGAGTTCCTCAACCTC
CGAACCAGCGTCAGCATGCAACTCCACCCGACCAGTGCTCTCTACGGTCT
GGGATATGTCCCGGAGTACGTGGTCTACCACGAATTGATCCTCACCAGCA
AGGAGTACATGTCTACCGTGACTGCTGTAGATCCACATGTAAGGTCCCCA
CCCTATCCCATATACAATAAATACTAACGACATCCGGTAATAGTGGCTCG
CCGAACTCGGAGGTGTCTTCTACTCCGTCAAAGAAAAGGGATATTCTCAG
CGCGAGCGCCGCATCACCGAACAAGAGTTCAACCGGCGCGTGGAGATCGA
GACTCAGATGGCGGCGGACCGCGAACGCGCCGCAGCCGAGAAGCAGCGCG
AGGCGGAGAGGAACGATCCATCCAGACGCAGAAAGGAGATTGAAGTGGGG
TCTGTTGTGCGGAGGCCTGTCGCGACAGCAAGACGTGTAGGGGGTGTGAC
GGCCTCGAGTAGTGGTGGTGGTGCGCGCAACGGTGGAAGTGGAGGCGGAA
GCGTGGTTAAGAAGCCGCAGATTAAGCGGAAACCAGGACGGGCCTTTTGA
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Coding sequence (CDS) from alignment at An18:889401..892200+

>CBS51388_010980-T1 ID=CBS51388_010980-T1|Name=CBS51388_010980-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5490bp|location=Sequence derived from alignment at An18:889401..892200+ (Aspergillus niger CBS 513.88)
ATGGCTTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCTCCAATCT
CCCGCCACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAACTGGGAAA
CGAACCGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTTCGATGGC
GACTTCATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGCTGGTCCA
TGACCTCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACCAAGCAGC
TCGAGCCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGCAGTTTTC
AGTCGGAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGCGGGAACG
CCAGAAGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCGCTGGGAA
ACCTCATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGCTATGCCC
GTGGAGGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATCTGAAAAA
GGATGAAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTCCGGGAGC
AGAGGGAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTTGCGCGTC
ATTCGAGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGTCTGGAAA
AACAACACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCGAAGTTTG
GCATGATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAGTGTTGCC
AAGCGTGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAGTTGGCTA
TGCTATTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATCAAGTACA
TGACTGATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGACCTTGAC
AAGTATTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGCTGAACAC
AGACGTGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGCAGGGACT
TGAAGCTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTTCTCCAGA
TTCTACGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGTTTCCTGT
CGATGTTCACTTCTCGCGCACACCATGCGAGGACTATGTTGACAGCGCGG
TCAAGCAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGATATTCTT
GTGTTTATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGCTGGTTGA
TGAGCGGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATTCTTCCCA
TTTACAGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGAACGGGCT
GAGCCTGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTGAAACCAG
TCTGACAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTACTCCAAAC
TTAAGGTGTACAACCCCAAGATGGGCATGGACACTCTGCAGATCACGCCA
ATATCACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGACGTACGGG
ACCGGGCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAGAACGAGC
TATACCTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTCCAACACC
GTCCTTCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACTTTGATTT
TATGGACCCCCCACCCCAGGAGACAATCACCACATCCCTCTTCGAGCTTT
GGTCACTCGGAGCACTCGACAATCTCGGCGACCTCACACCACTAGGACGT
CGAATGACACCATTCCCAATGGACCCCCCGCTCGCGAAGCTCATCATCAC
GGCCGCAGAAACCTACGGCTGCAGCGAGGAAATGCTAACCATCGTATCTA
TGCTATCCGTCCCCAGCGTCTTCTACCGTCCCAGAGAGCGACAAGAAGAA
TCCGACGCCGCGCGCGAGAAATTCTTCGTCCCAGAATCCGACCACCTCAC
TTTACTCCACGTGTACACGCAATGGAAAGCAAACGGCTACTCCGACGGCT
GGTGCACACGCCACTTCCTCCACGCCAAGGCACTGCGGCGGGCGCGCGAA
GTCCGCGACCAGCTGCACGACATCATGACGGTGCAGAAGATGCCCTTGGT
CAGTTGCGGCACTGACTGGGACGAGATCCGCAAATGCATCTGCTCGGGTT
TCTACCACCAAGCCGCGCGCGTCAAGGGTATCGGCGAGTTCCTCAACCTC
CGAACCAGCGTCAGCATGCAACTCCACCCGACCAGTGCTCTCTACGGTCT
GGGATATGTCCCGGAGTACGTGGTCTACCACGAATTGATCCTCACCAGCA
AGGAGTACATGTCTACCGTGACTGCTGTAGATCCACATTGGCTCGCCGAA
CTCGGAGGTGTCTTCTACTCCGTCAAAGAAAAGGGATATTCTCAGCGCGA
GCGCCGCATCACCGAACAAGAGTTCAACCGGCGCGTGGAGATCGAGACTC
AGATGGCGGCGGACCGCGAACGCGCCGCAGCCGAGAAGCAGCGCGAGGCG
GAGAGGAACGATCCATCCAGACGCAGAAAGGAGATTGAAGTGGGGTCTGT
TGTGCGGAGGCCTGTCGCGACAGCAAGACGTGTAGGGGGTGTGACGGCCT
CGAGTAGTGGTGGTGGTGCGCGCAACGGTGGAAGTGGAGGCGGAAGCGTG
GTTAAGAAGCCGCAGATTAAGCGGAAACCAGGACGGGCCTTTTGAATGGC
TTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCTCCAATCTCCCGC
CACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAACTGGGAAACGAAC
CGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTTCGATGGCGACTT
CATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGCTGGTCCATGACC
TCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACCAAGCAGCTCGAG
CCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGCAGTTTTCAGTCG
GAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGCGGGAACGCCAGA
AGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCGCTGGGAAACCTC
ATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGCTATGCCCGTGGA
GGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATCTGAAAAAGGATG
AAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTCCGGGAGCAGAGG
GAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTTGCGCGTCATTCG
AGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGTCTGGAAAAACAA
CACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCGAAGTTTGGCATG
ATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAGTGTTGCCAAGCG
TGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAGTTGGCTATGCTA
TTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATCAAGTACATGACT
GATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGACCTTGACAAGTA
TTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGCTGAACACAGACG
TGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGCAGGGACTTGAAG
CTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTTCTCCAGATTCTA
CGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGTTTCCTGTCGATG
TTCACTTCTCGCGCACACCATGCGAGGACTATGTTGACAGCGCGGTCAAG
CAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGATATTCTTGTGTT
TATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGCTGGTTGATGAGC
GGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATTCTTCCCATTTAC
AGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGAACGGGCTGAGCC
TGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTGAAACCAGTCTGA
CAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTACTCCAAACTTAAG
GTGTACAACCCCAAGATGGGCATGGACACTCTGCAGATCACGCCAATATC
ACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGACGTACGGGACCGG
GCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAGAACGAGCTATAC
CTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTCCAACACCGTCCT
TCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACTTTGATTTTATGG
ACCCCCCACCCCAGGAGACAATCACCACATCCCTCTTCGAGCTTTGGTCA
CTCGGAGCACTCGACAATCTCGGCGACCTCACACCACTAGGACGTCGAAT
GACACCATTCCCAATGGACCCCCCGCTCGCGAAGCTCATCATCACGGCCG
CAGAAACCTACGGCTGCAGCGAGGAAATGCTAACCATCGTATCTATGCTA
TCCGTCCCCAGCGTCTTCTACCGTCCCAGAGAGCGACAAGAAGAATCCGA
CGCCGCGCGCGAGAAATTCTTCGTCCCAGAATCCGACCACCTCACTTTAC
TCCACGTGTACACGCAATGGAAAGCAAACGGCTACTCCGACGGCTGGTGC
ACACGCCACTTCCTCCACGCCAAGGCACTGCGGCGGGCGCGCGAAGTCCG
CGACCAGCTGCACGACATCATGACGGTGCAGAAGATGCCCTTGGTCAGTT
GCGGCACTGACTGGGACGAGATCCGCAAATGCATCTGCTCGGGTTTCTAC
CACCAAGCCGCGCGCGTCAAGGGTATCGGCGAGTTCCTCAACCTCCGAAC
CAGCGTCAGCATGCAACTCCACCCGACCAGTGCTCTCTACGGTCTGGGAT
ATGTCCCGGAGTACGTGGTCTACCACGAATTGATCCTCACCAGCAAGGAG
TACATGTCTACCGTGACTGCTGTAGATCCACATTGGCTCGCCGAACTCGG
AGGTGTCTTCTACTCCGTCAAAGAAAAGGGATATTCTCAGCGCGAGCGCC
GCATCACCGAACAAGAGTTCAACCGGCGCGTGGAGATCGAGACTCAGATG
GCGGCGGACCGCGAACGCGCCGCAGCCGAGAAGCAGCGCGAGGCGGAGAG
GAACGATCCATCCAGACGCAGAAAGGAGATTGAAGTGGGGTCTGTTGTGC
GGAGGCCTGTCGCGACAGCAAGACGTGTAGGGGGTGTGACGGCCTCGAGT
AGTGGTGGTGGTGCGCGCAACGGTGGAAGTGGAGGCGGAAGCGTGGTTAA
GAAGCCGCAGATTAAGCGGAAACCAGGACGGGCCTTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0004386helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRP16CBS51388_010980Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010980-T1.exon1CBS51388_010980-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010980-T1.exon2CBS51388_010980-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010980-T1.cdsCBS51388_010980-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010980-T1CBS51388_010980-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR002464
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR011709
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR007502
DBxrefPFAM:PF07717
DBxrefPFAM:PF00271
DBxrefPFAM:PF04408
DBxrefPFAM:PF00270
ProductDEAH-box RNA helicase prp16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:889401..892200 +
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