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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:965966..967919+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011003-T1 ID=CBS51388_011003-T1|Name=CBS51388_011003-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1954bp|location=Sequence derived from alignment at An18:965966..967919+ (Aspergillus niger CBS 513.88)
ATGGACCCCGCCAAACCTGCCGTGTCATCCACTTTGGGGGAGGCCAAGTA
CCTTGAATTTCCCTGCGTACCAGAGGGCACAAAACACGAAGATGGTACCC
CCGTCTTGAACCGTTGGTCTTCTACTATCACCAGGGGCCATGAGTTCCCT
GGCGCGAAGGTCTGTATTCAGTTTTCTTGCCCGTTGCTCTCCCCGCAGAT
TCTGGACGAGTGTTGACCTCGTGTGAATTGGACAGGCTATGCTCTACGCG
GCAGGCATCCCCGATCACAATGCCATGACGAAGAGTCCCCAGGTTGGTGT
TGCGTCTGTGTGGTGGGAAGGCAACCCTTGCAACATGCACTTGTTGGACC
TGGCCAAGACGGTGAAGAAGGCGATCACGGACCAAGGCATGATCGGGTGG
CAGTACAATACTATTGGTGTGTCGGATGCGATTGGCATGGGGAGTGAAGG
TTGGTGCTGAACAAACGTCAATATTCTAGCCCTTTCTAATAGGATGTTAG
GTATGCGATTTTCTCTCCAAACCCGTGAGATCATTGCAGACAGTGTGGAG
TCTGTAACGTGCGCTCAATACCATGACGCCTGCATTGCCATCCCCGGATG
CGACAAGAACATGCCTGGTGTGGTGATGGGTATGGCGAGACACAATCGGC
CCTCGATCATGCTCTACGGTGGTACTATCGAGGTTGGGTATTCCCAGCTT
CTTCGGAAGCGGGTAAGCGTTTCGACGTGCTTCGAAGCGGCTGGTGCCTA
CACATATAACACTCTCCGTCAGCCGGATGACGGAGGTGATACCAGCAAGA
CCAAGGACGAGATCATGGATGATCTGGAGAGGCATGCCTGCCCGAGCGCG
GGAGCGTGTGGTGGTATGTTCACGGCCAACACCATGGCTACGGCCATTGA
GTCCATGGGTCTCTCCTTGCCCGGCTCGTCTTCTACGCCTGCATCTTCCC
CAACTAAGATGCGTGAGTGTGTCAAGGCAGCTGAAGCCATCAAGATTTGC
ATGGAGAAGAACATCCGTCCTCGGGATCTGTTGACCAAGCGGGCGTTCGA
GAATGCCCTGGTCATGACTATGGCCCTGGGAGGTAGCACCAATGGTGTGC
TTCACTTCCTGGCTATGGCCCGCACTGCCGGCGTGGACCTTACTCTGGAC
GACGTTCAGCGGGTCAGCAACAAGATCCCTTTCATTGCGGACCTGTCCCC
TAGTGGGAAATACTACATGGCGGACCTCTACGAAGTCGGAGGCATCCCGT
CGGTTCAGAAGTTGTTGATCGCAGCTGGTCTGCTCGACGGCGATATCCCC
ACCGTGACCGGCAAAACTCTGGCCCAGAACGTCGCATCGCACCCATCTCT
GTCTGCTGACCAGGTCATCATCCGTCCCCTGGATAACCCTATCAAGGCGA
CGGGCCACCTCCAGATCCTGCGAGGTAACCTTGCACCCGGTGGTGCGGTT
GCTAAGATTACCGGCAAGGAAGGGCTCCGGTTCACGGGTAAGGCGCGCGT
GTTTGACAAGGAGCATCAGCTCAACGAGGCCCTGAACCAGGGCAAGATCC
CTCACGGCGAGAACCTGGTTATCGTAGTTCGTTACGAGGGCCCGAAGGGT
GGCCCGGGAATGCCGGAACAACTGAAGGCCAGTGCAGCGCTCATGGGAGC
CAAGCTCACCAACGTGGCACTGATTACGGACGGGCGGTACTCTGGCGCTA
GTCACGGATTCATTGTGGGGCATATTGTCCCTGAAGCTGCTGTAGGAGGA
CCCATTGCCGTTGTTCGGGACGGCGATGTGATCACAATTGATGCCGAATC
GAACGCCATCACCATGGATGTATCGGATGAGGAGGTGCAGCAGCGTCTGC
GGGAGTGGAAGCCCCCGGCACCGCATGTCACACGAGGTGTGCTGGCCAAA
TATGCCCGGTTGGTGGGAGATGCCTCGAACGGAGCCATGACGGATCTATT
TTAG back to topCoding sequence (CDS) from alignment at An18:965966..967919+ >CBS51388_011003-T1 ID=CBS51388_011003-T1|Name=CBS51388_011003-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5481bp|location=Sequence derived from alignment at An18:965966..967919+ (Aspergillus niger CBS 513.88)
ATGGACCCCGCCAAACCTGCCGTGTCATCCACTTTGGGGGAGGCCAAGTA
CCTTGAATTTCCCTGCGTACCAGAGGGCACAAAACACGAAGATGGTACCC
CCGTCTTGAACCGTTGGTCTTCTACTATCACCAGGGGCCATGAGTTCCCT
GGCGCGAAGGCTATGCTCTACGCGGCAGGCATCCCCGATCACAATGCCAT
GACGAAGAGTCCCCAGGTTGGTGTTGCGTCTGTGTGGTGGGAAGGCAACC
CTTGCAACATGCACTTGTTGGACCTGGCCAAGACGGTGAAGAAGGCGATC
ACGGACCAAGGCATGATCGGGTGGCAGTACAATACTATTGGTGTGTCGGA
TGCGATTGGCATGGGGAGTGAAGGTATGCGATTTTCTCTCCAAACCCGTG
AGATCATTGCAGACAGTGTGGAGTCTGTAACGTGCGCTCAATACCATGAC
GCCTGCATTGCCATCCCCGGATGCGACAAGAACATGCCTGGTGTGGTGAT
GGGTATGGCGAGACACAATCGGCCCTCGATCATGCTCTACGGTGGTACTA
TCGAGGTTGGGTATTCCCAGCTTCTTCGGAAGCGGGTAAGCGTTTCGACG
TGCTTCGAAGCGGCTGGTGCCTACACATATAACACTCTCCGTCAGCCGGA
TGACGGAGGTGATACCAGCAAGACCAAGGACGAGATCATGGATGATCTGG
AGAGGCATGCCTGCCCGAGCGCGGGAGCGTGTGGTGGTATGTTCACGGCC
AACACCATGGCTACGGCCATTGAGTCCATGGGTCTCTCCTTGCCCGGCTC
GTCTTCTACGCCTGCATCTTCCCCAACTAAGATGCGTGAGTGTGTCAAGG
CAGCTGAAGCCATCAAGATTTGCATGGAGAAGAACATCCGTCCTCGGGAT
CTGTTGACCAAGCGGGCGTTCGAGAATGCCCTGGTCATGACTATGGCCCT
GGGAGGTAGCACCAATGGTGTGCTTCACTTCCTGGCTATGGCCCGCACTG
CCGGCGTGGACCTTACTCTGGACGACGTTCAGCGGGTCAGCAACAAGATC
CCTTTCATTGCGGACCTGTCCCCTAGTGGGAAATACTACATGGCGGACCT
CTACGAAGTCGGAGGCATCCCGTCGGTTCAGAAGTTGTTGATCGCAGCTG
GTCTGCTCGACGGCGATATCCCCACCGTGACCGGCAAAACTCTGGCCCAG
AACGTCGCATCGCACCCATCTCTGTCTGCTGACCAGGTCATCATCCGTCC
CCTGGATAACCCTATCAAGGCGACGGGCCACCTCCAGATCCTGCGAGGTA
ACCTTGCACCCGGTGGTGCGGTTGCTAAGATTACCGGCAAGGAAGGGCTC
CGGTTCACGGGTAAGGCGCGCGTGTTTGACAAGGAGCATCAGCTCAACGA
GGCCCTGAACCAGGGCAAGATCCCTCACGGCGAGAACCTGGTTATCGTAG
TTCGTTACGAGGGCCCGAAGGGTGGCCCGGGAATGCCGGAACAACTGAAG
GCCAGTGCAGCGCTCATGGGAGCCAAGCTCACCAACGTGGCACTGATTAC
GGACGGGCGGTACTCTGGCGCTAGTCACGGATTCATTGTGGGGCATATTG
TCCCTGAAGCTGCTGTAGGAGGACCCATTGCCGTTGTTCGGGACGGCGAT
GTGATCACAATTGATGCCGAATCGAACGCCATCACCATGGATGTATCGGA
TGAGGAGGTGCAGCAGCGTCTGCGGGAGTGGAAGCCCCCGGCACCGCATG
TCACACGAGGTGTGCTGGCCAAATATGCCCGGTTGGTGGGAGATGCCTCG
AACGGAGCCATGACGGATCTATTTTAGATGGACCCCGCCAAACCTGCCGT
GTCATCCACTTTGGGGGAGGCCAAGTACCTTGAATTTCCCTGCGTACCAG
AGGGCACAAAACACGAAGATGGTACCCCCGTCTTGAACCGTTGGTCTTCT
ACTATCACCAGGGGCCATGAGTTCCCTGGCGCGAAGGCTATGCTCTACGC
GGCAGGCATCCCCGATCACAATGCCATGACGAAGAGTCCCCAGGTTGGTG
TTGCGTCTGTGTGGTGGGAAGGCAACCCTTGCAACATGCACTTGTTGGAC
CTGGCCAAGACGGTGAAGAAGGCGATCACGGACCAAGGCATGATCGGGTG
GCAGTACAATACTATTGGTGTGTCGGATGCGATTGGCATGGGGAGTGAAG
GTATGCGATTTTCTCTCCAAACCCGTGAGATCATTGCAGACAGTGTGGAG
TCTGTAACGTGCGCTCAATACCATGACGCCTGCATTGCCATCCCCGGATG
CGACAAGAACATGCCTGGTGTGGTGATGGGTATGGCGAGACACAATCGGC
CCTCGATCATGCTCTACGGTGGTACTATCGAGGTTGGGTATTCCCAGCTT
CTTCGGAAGCGGGTAAGCGTTTCGACGTGCTTCGAAGCGGCTGGTGCCTA
CACATATAACACTCTCCGTCAGCCGGATGACGGAGGTGATACCAGCAAGA
CCAAGGACGAGATCATGGATGATCTGGAGAGGCATGCCTGCCCGAGCGCG
GGAGCGTGTGGTGGTATGTTCACGGCCAACACCATGGCTACGGCCATTGA
GTCCATGGGTCTCTCCTTGCCCGGCTCGTCTTCTACGCCTGCATCTTCCC
CAACTAAGATGCGTGAGTGTGTCAAGGCAGCTGAAGCCATCAAGATTTGC
ATGGAGAAGAACATCCGTCCTCGGGATCTGTTGACCAAGCGGGCGTTCGA
GAATGCCCTGGTCATGACTATGGCCCTGGGAGGTAGCACCAATGGTGTGC
TTCACTTCCTGGCTATGGCCCGCACTGCCGGCGTGGACCTTACTCTGGAC
GACGTTCAGCGGGTCAGCAACAAGATCCCTTTCATTGCGGACCTGTCCCC
TAGTGGGAAATACTACATGGCGGACCTCTACGAAGTCGGAGGCATCCCGT
CGGTTCAGAAGTTGTTGATCGCAGCTGGTCTGCTCGACGGCGATATCCCC
ACCGTGACCGGCAAAACTCTGGCCCAGAACGTCGCATCGCACCCATCTCT
GTCTGCTGACCAGGTCATCATCCGTCCCCTGGATAACCCTATCAAGGCGA
CGGGCCACCTCCAGATCCTGCGAGGTAACCTTGCACCCGGTGGTGCGGTT
GCTAAGATTACCGGCAAGGAAGGGCTCCGGTTCACGGGTAAGGCGCGCGT
GTTTGACAAGGAGCATCAGCTCAACGAGGCCCTGAACCAGGGCAAGATCC
CTCACGGCGAGAACCTGGTTATCGTAGTTCGTTACGAGGGCCCGAAGGGT
GGCCCGGGAATGCCGGAACAACTGAAGGCCAGTGCAGCGCTCATGGGAGC
CAAGCTCACCAACGTGGCACTGATTACGGACGGGCGGTACTCTGGCGCTA
GTCACGGATTCATTGTGGGGCATATTGTCCCTGAAGCTGCTGTAGGAGGA
CCCATTGCCGTTGTTCGGGACGGCGATGTGATCACAATTGATGCCGAATC
GAACGCCATCACCATGGATGTATCGGATGAGGAGGTGCAGCAGCGTCTGC
GGGAGTGGAAGCCCCCGGCACCGCATGTCACACGAGGTGTGCTGGCCAAA
TATGCCCGGTTGGTGGGAGATGCCTCGAACGGAGCCATGACGGATCTATT
TTAGATGGACCCCGCCAAACCTGCCGTGTCATCCACTTTGGGGGAGGCCA
AGTACCTTGAATTTCCCTGCGTACCAGAGGGCACAAAACACGAAGATGGT
ACCCCCGTCTTGAACCGTTGGTCTTCTACTATCACCAGGGGCCATGAGTT
CCCTGGCGCGAAGGCTATGCTCTACGCGGCAGGCATCCCCGATCACAATG
CCATGACGAAGAGTCCCCAGGTTGGTGTTGCGTCTGTGTGGTGGGAAGGC
AACCCTTGCAACATGCACTTGTTGGACCTGGCCAAGACGGTGAAGAAGGC
GATCACGGACCAAGGCATGATCGGGTGGCAGTACAATACTATTGGTGTGT
CGGATGCGATTGGCATGGGGAGTGAAGGTATGCGATTTTCTCTCCAAACC
CGTGAGATCATTGCAGACAGTGTGGAGTCTGTAACGTGCGCTCAATACCA
TGACGCCTGCATTGCCATCCCCGGATGCGACAAGAACATGCCTGGTGTGG
TGATGGGTATGGCGAGACACAATCGGCCCTCGATCATGCTCTACGGTGGT
ACTATCGAGGTTGGGTATTCCCAGCTTCTTCGGAAGCGGGTAAGCGTTTC
GACGTGCTTCGAAGCGGCTGGTGCCTACACATATAACACTCTCCGTCAGC
CGGATGACGGAGGTGATACCAGCAAGACCAAGGACGAGATCATGGATGAT
CTGGAGAGGCATGCCTGCCCGAGCGCGGGAGCGTGTGGTGGTATGTTCAC
GGCCAACACCATGGCTACGGCCATTGAGTCCATGGGTCTCTCCTTGCCCG
GCTCGTCTTCTACGCCTGCATCTTCCCCAACTAAGATGCGTGAGTGTGTC
AAGGCAGCTGAAGCCATCAAGATTTGCATGGAGAAGAACATCCGTCCTCG
GGATCTGTTGACCAAGCGGGCGTTCGAGAATGCCCTGGTCATGACTATGG
CCCTGGGAGGTAGCACCAATGGTGTGCTTCACTTCCTGGCTATGGCCCGC
ACTGCCGGCGTGGACCTTACTCTGGACGACGTTCAGCGGGTCAGCAACAA
GATCCCTTTCATTGCGGACCTGTCCCCTAGTGGGAAATACTACATGGCGG
ACCTCTACGAAGTCGGAGGCATCCCGTCGGTTCAGAAGTTGTTGATCGCA
GCTGGTCTGCTCGACGGCGATATCCCCACCGTGACCGGCAAAACTCTGGC
CCAGAACGTCGCATCGCACCCATCTCTGTCTGCTGACCAGGTCATCATCC
GTCCCCTGGATAACCCTATCAAGGCGACGGGCCACCTCCAGATCCTGCGA
GGTAACCTTGCACCCGGTGGTGCGGTTGCTAAGATTACCGGCAAGGAAGG
GCTCCGGTTCACGGGTAAGGCGCGCGTGTTTGACAAGGAGCATCAGCTCA
ACGAGGCCCTGAACCAGGGCAAGATCCCTCACGGCGAGAACCTGGTTATC
GTAGTTCGTTACGAGGGCCCGAAGGGTGGCCCGGGAATGCCGGAACAACT
GAAGGCCAGTGCAGCGCTCATGGGAGCCAAGCTCACCAACGTGGCACTGA
TTACGGACGGGCGGTACTCTGGCGCTAGTCACGGATTCATTGTGGGGCAT
ATTGTCCCTGAAGCTGCTGTAGGAGGACCCATTGCCGTTGTTCGGGACGG
CGATGTGATCACAATTGATGCCGAATCGAACGCCATCACCATGGATGTAT
CGGATGAGGAGGTGCAGCAGCGTCTGCGGGAGTGGAAGCCCCCGGCACCG
CATGTCACACGAGGTGTGCTGGCCAAATATGCCCGGTTGGTGGGAGATGC
CTCGAACGGAGCCATGACGGATCTATTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004160 | dihydroxy-acid dehydratase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009082 | branched-chain amino acid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037237 |
| DBxref | InterPro:IPR020558 |
| DBxref | InterPro:IPR042096 |
| DBxref | InterPro:IPR000581 |
| DBxref | InterPro:IPR004404 |
| DBxref | PFAM:PF00920 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:965966..967919 + |
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