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CBS51388_011005-T1, CBS51388_011005-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011005-T1
Unique NameCBS51388_011005-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:972169..973288+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011005-T1 ID=CBS51388_011005-T1|Name=CBS51388_011005-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1120bp|location=Sequence derived from alignment at An18:972169..973288+ (Aspergillus niger CBS 513.88)
ATGGGTGGTGTCACCGTTCGCGATGTCGACGTAAGTCATGTCATGTCAAC
TTTTGGAGATTGGTTGGTCGGTGCGGAATGGATGGGATATATGGCATGGC
ATGGTATGGCACGGCACGATCAGGACAAAATGAGAAGAAAAGAACGACAG
GAATGGGAAATACACATGGTATCGGCATTCAACGGAGCAGAAATCGACAT
TTTGATATCGAATTTGGGCGCATGCAGCAAAGCAAGCAAGGCTGGGTACA
TATACTCTGGGCATGAGATGTGATGAGTTTATGGGCTTGGAATGGGAATA
CGCAATGCACGACTACCACGATTGTGTACTCCAGCCATATATTATGGAAT
ATGGGAATTCTGGATGAAATGGATGTTATGGAGTCAGGAACGAACTGGAA
TTCCTGCCGCCGCGACACGCAGAGAAATGTCCAGATTTGCCGATACGTGC
CGTGCCATGCTATATGCCATATCATGCCTGAATGCGCACCTGCCAGACAA
TCTTCAATACACGATGCCTGTGGACGGATCAGCTAACAGGTTTCCTTTTC
CATGGTTATAGGCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAAG
CGTCAGGGAAAGCTCCCCATTCCTGGTTCGTGCACACCGGATTTCATCGA
AAAGTCGTAACAATCAGATCAAAACTAATACGGTTATTAGGATGGGTTGA
CACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACT
GGTACGACAACTGCCATTGATCCAATACTTCGAAAAAAAAAAAAAAAAAA
AAACAGCGTGATTAATAGAAATCTGCAATAGGTACTACGTCCGCGCCGCT
GCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGGCCGTCT
CCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCGCCCACC
ACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCCCTCGAG
AAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCGCATCAC
CCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGACG
AGGAGGAGGACGAGGAGTAA
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Coding sequence (CDS) from alignment at An18:972169..973288+

>CBS51388_011005-T1 ID=CBS51388_011005-T1|Name=CBS51388_011005-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1776bp|location=Sequence derived from alignment at An18:972169..973288+ (Aspergillus niger CBS 513.88)
ATGGGTGGTGTCACCGTTCGCGATGTCGACGCGCAGAAGTTCATCGCTGC
TTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGGATGGG
TTGACACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCC
GACTGGTACTACGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCG
CAAGACCGTCGGTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGA
ACCGCGGCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGAC
CGTAAGGTCATCCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGA
GGAGAAGGGTGGCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACC
GTATCGCCAAGACCACCGTTGACGAGGAGGAGGACGAGGAGTAAATGGGT
GGTGTCACCGTTCGCGATGTCGACGCGCAGAAGTTCATCGCTGCTTACTC
TGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGGATGGGTTGACA
CTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGG
TACTACGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGAC
CGTCGGTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCG
GCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAG
GTCATCCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAA
GGGTGGCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCG
CCAAGACCACCGTTGACGAGGAGGAGGACGAGGAGTAAATGGGTGGTGTC
ACCGTTCGCGATGTCGACGCGCAGAAGTTCATCGCTGCTTACTCTGCTTT
CCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGGATGGGTTGACACTGTCA
AGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGTACTAC
GTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGG
TGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCC
GCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATC
CAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGG
CCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGA
CCACCGTTGACGAGGAGGAGGACGAGGAGTAAATGGGTGGTGTCACCGTT
CGCGATGTCGACGCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAA
GCGTCAGGGAAAGCTCCCCATTCCTGGATGGGTTGACACTGTCAAGACCT
CCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGTACTACGTCCGC
GCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGG
CCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCG
CCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCC
CTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCG
CATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCG
TTGACGAGGAGGAGGACGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS19CBS51388_011005Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011005-T1.exon1CBS51388_011005-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011005-T1.exon2CBS51388_011005-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011005-T1.exon3CBS51388_011005-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011005-T1.exon4CBS51388_011005-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011005-T1.cdsCBS51388_011005-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011005-T1CBS51388_011005-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR038111
DBxrefInterPro:IPR001266
DBxrefPFAM:PF01090
Product40S ribosomal protein S19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:972169..973288 +
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