|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1135139..1135741- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011061-T1 ID=CBS51388_011061-T1|Name=CBS51388_011061-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=603bp|location=Sequence derived from alignment at An18:1135139..1135741- (Aspergillus niger CBS 513.88)
ATGCCGTTGACCTGTTAGTGTTCTCCTGCAGTCCCTACATCTACAGTACT
TTTTTTTGGCTAACTGTCACCTTTCTACTCCCCAGTCTGCCCTAATTGCA
GCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCCCCTA
GGCGTTAATCGATTCGAGTGCCGTACATGCCCATACCAATATGCCCTCGA
CCAGAGCTGGTTTGAGAAGACACCTATGAAACAAAAAGAAGTGGAGGATG
TCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAGTAAG
TTACGAACTTTGAGGGGCACTCTTCCCTACGGTTGTTGGAATAAACTTGG
GGGCTTGGGGCTAATGTTGTGCTTTCTCTTCCTTTTCTCCTACCCGCAGC
TCAATGCCCCGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGC
TGCAGATTCGGAGTGCAGACGAGCCGATGACCACATTCCTAAAGGTGGGT
GCGCACCAGCGGCTTATGCGGTTCTCATGCATCTGGCCTGACATGCTTTG
CTGATTGCGGTTGACAGTGTACCACGTGTGGTGCCCGATGGAGAGAGAAC
TGA back to topCoding sequence (CDS) from alignment at An18:1135139..1135741- >CBS51388_011061-T1 ID=CBS51388_011061-T1|Name=CBS51388_011061-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1416bp|location=Sequence derived from alignment at An18:1135139..1135741- (Aspergillus niger CBS 513.88)
TGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACTCAATGCCCCGCA
GAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCTGCAGATTCGGAG
TGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCCTAATTGCAGCAA
TGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCCCCTAGGCG
TTAATCGATTCGAGTGCCGTACATGCCCATACCAATATGCCCTCGACCAG
AGCTGGTTTGAGAAGACACCTATGAAACAAAAAGAAGTGGAGGATGTCTT
TGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAATGCCGTTG
ACCTTGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACTCAATGCCC
CGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCTGCAGATTC
GGAGTGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCCTAATTGCA
GCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCCCCTA
GGCGTTAATCGATTCGAGTGCCGTACATGCCCATACCAATATGCCCTCGA
CCAGAGCTGGTTTGAGAAGACACCTATGAAACAAAAAGAAGTGGAGGATG
TCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAATGCC
GTTGACCTTGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACTCAAT
GCCCCGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCTGCAG
ATTCGGAGTGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCCTAAT
TGCAGCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCC
CCTAGGCGTTAATCGATTCGAGTGCCGTACATGCCCATACCAATATGCCC
TCGACCAGAGCTGGTTTGAGAAGACACCTATGAAACAAAAAGAAGTGGAG
GATGTCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAA
TGCCGTTGACCTTGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACT
CAATGCCCCGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCT
GCAGATTCGGAGTGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCC
TAATTGCAGCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGC
ATCCCCTAGGCGTTAATCGATTCGAGTGCCGTACATGCCCATACCAATAT
GCCCTCGACCAGAGCTGGTTTGAGAAGACACCTATGAAACAAAAAGAAGT
GGAGGATGTCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGG
CCAATGCCGTTGACCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042779 | tRNA 3'-trailer cleavage |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926539T |
| DBxref | InterPro:IPR034014 |
| DBxref | InterPro:IPR001529 |
| DBxref | InterPro:IPR012164 |
| DBxref | InterPro:IPR001222 |
| DBxref | PFAM:PF01096 |
| DBxref | PFAM:PF02150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1135139..1135741 - |
|
