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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1168815..1170153- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011075-T1 ID=CBS51388_011075-T1|Name=CBS51388_011075-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1339bp|location=Sequence derived from alignment at An18:1168815..1170153- (Aspergillus niger CBS 513.88)
ATGGCACCCTCTTCGACGACCGCTGGGCGGATAGACGAAGCCCGGGGTCT
CGTGAAGAGCGACCCTTCCAAGGCCGAGAGCATCCTCAAGGAAATCCTTG
CGCAAGGTACCGGCTCGTCTGAGGCCTCATCGCGCGATTACGAGAATGCC
CTGGTGTTGCTGGGAGAGCTCTACCGGGACCAGAAGAAGCCCCACGAGAT
TGCCGAACTCATCAAGACCAGCCGCGATTCCTTCTCTTCATTTGCCAAGG
CAAAGACAGCTAAGCTGGGTATGTAGCATTGACAGAGATGATGTTTTGCT
TCCAGGGTTACTGACCACCCGTCCTCTGATAGTCCGCCAGCTGTTGGACC
TGTTCAGCGAGATCCCGAACACACTCGATATCCAAGTTTCCGTCATCCAA
TCATGCATTGAATGGGCCATCGCCGAGCGGAGGTCCTTCCTTCGTCAGAA
CCTCCAGACTCGCCTTGTAGCTATCTACATGCAGAAACAGACCTACTACG
ATGCGCTCACCCTCATCAACTCCCTCCTCCGCGAGCTAAAGCGCCTGGAT
GACAAGCTCATGCTGGTTGAGGTGCAGCTGCTGGAGTCGCGGGTGTACCA
TGCATTGGGCAACCAGGCCAAGGCACGTGCTGCCTTGACGGCAGCCCGGA
CATCGGCCGCTTCCGTTTACACGCCGCCGAACCTGCAGGCCGGTCTCGAC
ATGCAGAGTGGTATGCTACACGCAGAGGACAAGGATTTCAACACGTCATT
CTCCTATTTCATTGAGGCTCTGGAAGGGTACAGCTCCCTCGATGAGGGAG
AAAAGGCCACTGCGGCCCTCCAATATATGCTGCTGTGCAAGATCATGTTG
AACCTGGTGGATGATGTGACAAATTTGCTGGGATCGAAGCAGGCTCAGAA
GTATGCCAGCCCGCGACTCGAGGCCATGAAGGCTGTGGCGCGTGCACATG
CCAACCGGTCCCTGGAGGAGTACGAAAAGGCGCTCTCGGACTACCGGTTC
GAGCTGGGCAGTGATACATTCATCCGCAACCACCTCCGCAGATTGTACGA
TGCCATGTTGGAGCAGAACCTGATCAAGGTTATTGAACCTTTCAGCCGGG
TCGAGCTGGACCACATTGCTAAGATGGTTGGGCTGGACACGCAGCAGGTG
GAGCGGAAGCTCTCCCAGATGATCCTGGACAAGGTGATTATTGGAGTGCT
CGACCAGGGGGCTGGATGCCTGATTGTCTACGATGAGACGGAGCGGGACC
AGGCATACGATGCTGCGTTGGACACGATCGAGAAGCTGAGCAATGTGGTG
GAAGAGCTGTACACTAATCAAGCATCGCTGCTAGAGTAA back to topCoding sequence (CDS) from alignment at An18:1168815..1170153- >CBS51388_011075-T1 ID=CBS51388_011075-T1|Name=CBS51388_011075-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2550bp|location=Sequence derived from alignment at An18:1168815..1170153- (Aspergillus niger CBS 513.88)
TCCGCCAGCTGTTGGACCTGTTCAGCGAGATCCCGAACACACTCGATATC
CAAGTTTCCGTCATCCAATCATGCATTGAATGGGCCATCGCCGAGCGGAG
GTCCTTCCTTCGTCAGAACCTCCAGACTCGCCTTGTAGCTATCTACATGC
AGAAACAGACCTACTACGATGCGCTCACCCTCATCAACTCCCTCCTCCGC
GAGCTAAAGCGCCTGGATGACAAGCTCATGCTGGTTGAGGTGCAGCTGCT
GGAGTCGCGGGTGTACCATGCATTGGGCAACCAGGCCAAGGCACGTGCTG
CCTTGACGGCAGCCCGGACATCGGCCGCTTCCGTTTACACGCCGCCGAAC
CTGCAGGCCGGTCTCGACATGCAGAGTGGTATGCTACACGCAGAGGACAA
GGATTTCAACACGTCATTCTCCTATTTCATTGAGGCTCTGGAAGGGTACA
GCTCCCTCGATGAGGGAGAAAAGGCCACTGCGGCCCTCCAATATATGCTG
CTGTGCAAGATCATGTTGAACCTGGTGGATGATGTGACAAATTTGCTGGG
ATCGAAGCAGGCTCAGAAGTATGCCAGCCCGCGACTCGAGGCCATGAAGG
CTGTGGCGCGTGCACATGCCAACCGGTCCCTGGAGGAGTACGAAAAGGCG
CTCTCGGACTACCGGTTCGAGCTGGGCAGTGATACATTCATCCGCAACCA
CCTCCGCAGATTGTACGATGCCATGTTGGAGCAGAACCTGATCAAGGTTA
TTGAACCTTTCAGCCGGGTCGAGCTGGACCACATTGCTAAGATGGTTGGG
CTGGACACGCAGCAGGTGGAGCGGAAGCTCTCCCAGATGATCCTGGACAA
GGTGATTATTGGAGTGCTCGACCAGGGGGCTGGATGCCTGATTGTCTACG
ATGAGACGGAGCGGGACCAGGCATACGATGCTGCGTTGGACACGATCGAG
AAGCTGAGCAATGTGGTGGAAGAGCTGTACACTAATCAAGCATCGCTGCT
AGAGTAAATGGCACCCTCTTCGACGACCGCTGGGCGGATAGACGAAGCCC
GGGGTCTCGTGAAGAGCGACCCTTCCAAGGCCGAGAGCATCCTCAAGGAA
ATCCTTGCGCAAGGTACCGGCTCGTCTGAGGCCTCATCGCGCGATTACGA
GAATGCCCTGGTGTTGCTGGGAGAGCTCTACCGGGACCAGAAGAAGCCCC
ACGAGATTGCCGAACTCATCAAGACCAGCCGCGATTCCTTCTCTTCATTT
GCCAAGGCAAAGACAGCTAAGCTGGTCCGCCAGCTGTTGGACCTGTTCAG
CGAGATCCCGAACACACTCGATATCCAAGTTTCCGTCATCCAATCATGCA
TTGAATGGGCCATCGCCGAGCGGAGGTCCTTCCTTCGTCAGAACCTCCAG
ACTCGCCTTGTAGCTATCTACATGCAGAAACAGACCTACTACGATGCGCT
CACCCTCATCAACTCCCTCCTCCGCGAGCTAAAGCGCCTGGATGACAAGC
TCATGCTGGTTGAGGTGCAGCTGCTGGAGTCGCGGGTGTACCATGCATTG
GGCAACCAGGCCAAGGCACGTGCTGCCTTGACGGCAGCCCGGACATCGGC
CGCTTCCGTTTACACGCCGCCGAACCTGCAGGCCGGTCTCGACATGCAGA
GTGGTATGCTACACGCAGAGGACAAGGATTTCAACACGTCATTCTCCTAT
TTCATTGAGGCTCTGGAAGGGTACAGCTCCCTCGATGAGGGAGAAAAGGC
CACTGCGGCCCTCCAATATATGCTGCTGTGCAAGATCATGTTGAACCTGG
TGGATGATGTGACAAATTTGCTGGGATCGAAGCAGGCTCAGAAGTATGCC
AGCCCGCGACTCGAGGCCATGAAGGCTGTGGCGCGTGCACATGCCAACCG
GTCCCTGGAGGAGTACGAAAAGGCGCTCTCGGACTACCGGTTCGAGCTGG
GCAGTGATACATTCATCCGCAACCACCTCCGCAGATTGTACGATGCCATG
TTGGAGCAGAACCTGATCAAGGTTATTGAACCTTTCAGCCGGGTCGAGCT
GGACCACATTGCTAAGATGGTTGGGCTGGACACGCAGCAGGTGGAGCGGA
AGCTCTCCCAGATGATCCTGGACAAGGTGATTATTGGAGTGCTCGACCAG
GGGGCTGGATGCCTGATTGTCTACGATGAGACGGAGCGGGACCAGGCATA
CGATGCTGCGTTGGACACGATCGAGAAGCTGAGCAATGTGGTGGAAGAGC
TGTACACTAATCAAGCATCGCTGCTAGAGTAAATGGCACCCTCTTCGACG
ACCGCTGGGCGGATAGACGAAGCCCGGGGTCTCGTGAAGAGCGACCCTTC
CAAGGCCGAGAGCATCCTCAAGGAAATCCTTGCGCAAGGTACCGGCTCGT
CTGAGGCCTCATCGCGCGATTACGAGAATGCCCTGGTGTTGCTGGGAGAG
CTCTACCGGGACCAGAAGAAGCCCCACGAGATTGCCGAACTCATCAAGAC
CAGCCGCGATTCCTTCTCTTCATTTGCCAAGGCAAAGACAGCTAAGCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092630YS |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR040773 |
| DBxref | InterPro:IPR040780 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF18055 |
| DBxref | PFAM:PF18503 |
| DBxref | PFAM:PF01399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1168815..1170153 - |
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