You are here

Home

CBS51388_011077-T1, CBS51388_011077-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011077-T1
Unique NameCBS51388_011077-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1172110..1173375-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011077-T1 ID=CBS51388_011077-T1|Name=CBS51388_011077-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1266bp|location=Sequence derived from alignment at An18:1172110..1173375- (Aspergillus niger CBS 513.88)
ATGGCCACCTCAACAACCCCCAAACTCATCCACACCACCCCCGTCCAACC
CACAACCACCACCACCAACACCTCCAATTCAAACCCCCCCATAACCCTCG
ACCTCCTCCTCACAACTCTCACTCGCACCATCCTCCACCCCATCCCATCC
TACATTCTTCTCCTGTGCCTCCGCGCCCAAGCAACCCCCTACACCTCCGT
CCCCTTCCTCATCGCCTTCGCCTACGCCGCCCTCCTCACCCTCATCTACA
TTCTAAGCACACTCAACCAGCAACTAGCATACGGAGCTCCACGCACAGTC
GATCTCTCCAATGAAGTGGTGGTCGTGACGGGCGGAGCGAGCGGGTTGGG
ATTACTTATTGCGAGGATATATGCGCTTCGCGGCGCCACGGTAGCGGTTT
TGGATATTCGGGGGATAGCGGGTGAGGAGGTGGAGGAGATGGGGTTGGGA
GGGAGTTATGTTTGTGATGTTTCGGATAGGGGGGTTTTGGAGGGGGTTGT
GGGGAGGGTGAGGCAGGAGGTATGTATAATTTCCTATTATTGTGTACAAA
GGGGAAGAAGAAAGGTATGGATATGGGTATATTGATGATGGCTAACTATT
CATTGATTGATTGCGGGATAGTTGGGTACTCCTACCATATTGATCCATTG
CGCAGCTGCAAGAATCAACGGGCTGCCTCTGCAACAGCTCTCTCCCGAGG
CATTCCAGAAAACTATCAACACCAATTTACTCGCCGCCGTTCATGCCTAT
CAGGTATTTTTGCCTTATATGCTGGCTGCTCCGGATGGTGGCACCATTGC
CACAGTGAGTTCCGTGCTCGGGCAGCTATGTGCGGCTGGGTTGGCGGATT
ACTCGGCTAGTAAGGCTGGGTTGAGCGCGTTGCATCGCTCGCTCGAGGCC
GAACTTCGCCAATCCGGGGACGAGGCAAAAGTGAAGATGGTTCTGGTGGA
GCCGGGCCAGATCTCAACGCCGCTGTTTGAATCCGTCCAGACACCAAACC
GGTTCTTTGCGCCCGTTCTGGAGCCAGTCCAGGTGGCCCAGGCTATTGTC
TCGGCTGTCGACAGCGGCAGGGGTGGCGTGATAAGGTTGCCCGCGTTTGC
CATGCTGGTGAACTGGTATGCGGTGTTGCCGGCGAGCGTGCAGCGGTTGG
CGCGGTACCTGAGCGGGATTGACGGCGCAGTAGCACAAGCGTCGTCCAAA
GCCGACAGGGCTGATTCGTCCAGCCAGCAATTGCAGACTGAGTTGGATCA
CGTGAAAGAGGACTGA
back to top

Coding sequence (CDS) from alignment at An18:1172110..1173375-

>CBS51388_011077-T1 ID=CBS51388_011077-T1|Name=CBS51388_011077-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2328bp|location=Sequence derived from alignment at An18:1172110..1173375- (Aspergillus niger CBS 513.88)
TTGGGTACTCCTACCATATTGATCCATTGCGCAGCTGCAAGAATCAACGG
GCTGCCTCTGCAACAGCTCTCTCCCGAGGCATTCCAGAAAACTATCAACA
CCAATTTACTCGCCGCCGTTCATGCCTATCAGGTATTTTTGCCTTATATG
CTGGCTGCTCCGGATGGTGGCACCATTGCCACAGTGAGTTCCGTGCTCGG
GCAGCTATGTGCGGCTGGGTTGGCGGATTACTCGGCTAGTAAGGCTGGGT
TGAGCGCGTTGCATCGCTCGCTCGAGGCCGAACTTCGCCAATCCGGGGAC
GAGGCAAAAGTGAAGATGGTTCTGGTGGAGCCGGGCCAGATCTCAACGCC
GCTGTTTGAATCCGTCCAGACACCAAACCGGTTCTTTGCGCCCGTTCTGG
AGCCAGTCCAGGTGGCCCAGGCTATTGTCTCGGCTGTCGACAGCGGCAGG
GGTGGCGTGATAAGGTTGCCCGCGTTTGCCATGCTGGTGAACTGGTATGC
GGTGTTGCCGGCGAGCGTGCAGCGGTTGGCGCGGTACCTGAGCGGGATTG
ACGGCGCAGTAGCACAAGCGTCGTCCAAAGCCGACAGGGCTGATTCGTCC
AGCCAGCAATTGCAGACTGAGTTGGATCACGTGAAAGAGGACTGAATGGC
CACCTCAACAACCCCCAAACTCATCCACACCACCCCCGTCCAACCCACAA
CCACCACCACCAACACCTCCAATTCAAACCCCCCCATAACCCTCGACCTC
CTCCTCACAACTCTCACTCGCACCATCCTCCACCCCATCCCATCCTACAT
TCTTCTCCTGTGCCTCCGCGCCCAAGCAACCCCCTACACCTCCGTCCCCT
TCCTCATCGCCTTCGCCTACGCCGCCCTCCTCACCCTCATCTACATTCTA
AGCACACTCAACCAGCAACTAGCATACGGAGCTCCACGCACAGTCGATCT
CTCCAATGAAGTGGTGGTCGTGACGGGCGGAGCGAGCGGGTTGGGATTAC
TTATTGCGAGGATATATGCGCTTCGCGGCGCCACGGTAGCGGTTTTGGAT
ATTCGGGGGATAGCGGGTGAGGAGGTGGAGGAGATGGGGTTGGGAGGGAG
TTATGTTTGTGATGTTTCGGATAGGGGGGTTTTGGAGGGGGTTGTGGGGA
GGGTGAGGCAGGAGTTGGGTACTCCTACCATATTGATCCATTGCGCAGCT
GCAAGAATCAACGGGCTGCCTCTGCAACAGCTCTCTCCCGAGGCATTCCA
GAAAACTATCAACACCAATTTACTCGCCGCCGTTCATGCCTATCAGGTAT
TTTTGCCTTATATGCTGGCTGCTCCGGATGGTGGCACCATTGCCACAGTG
AGTTCCGTGCTCGGGCAGCTATGTGCGGCTGGGTTGGCGGATTACTCGGC
TAGTAAGGCTGGGTTGAGCGCGTTGCATCGCTCGCTCGAGGCCGAACTTC
GCCAATCCGGGGACGAGGCAAAAGTGAAGATGGTTCTGGTGGAGCCGGGC
CAGATCTCAACGCCGCTGTTTGAATCCGTCCAGACACCAAACCGGTTCTT
TGCGCCCGTTCTGGAGCCAGTCCAGGTGGCCCAGGCTATTGTCTCGGCTG
TCGACAGCGGCAGGGGTGGCGTGATAAGGTTGCCCGCGTTTGCCATGCTG
GTGAACTGGTATGCGGTGTTGCCGGCGAGCGTGCAGCGGTTGGCGCGGTA
CCTGAGCGGGATTGACGGCGCAGTAGCACAAGCGTCGTCCAAAGCCGACA
GGGCTGATTCGTCCAGCCAGCAATTGCAGACTGAGTTGGATCACGTGAAA
GAGGACTGAATGGCCACCTCAACAACCCCCAAACTCATCCACACCACCCC
CGTCCAACCCACAACCACCACCACCAACACCTCCAATTCAAACCCCCCCA
TAACCCTCGACCTCCTCCTCACAACTCTCACTCGCACCATCCTCCACCCC
ATCCCATCCTACATTCTTCTCCTGTGCCTCCGCGCCCAAGCAACCCCCTA
CACCTCCGTCCCCTTCCTCATCGCCTTCGCCTACGCCGCCCTCCTCACCC
TCATCTACATTCTAAGCACACTCAACCAGCAACTAGCATACGGAGCTCCA
CGCACAGTCGATCTCTCCAATGAAGTGGTGGTCGTGACGGGCGGAGCGAG
CGGGTTGGGATTACTTATTGCGAGGATATATGCGCTTCGCGGCGCCACGG
TAGCGGTTTTGGATATTCGGGGGATAGCGGGTGAGGAGGTGGAGGAGATG
GGGTTGGGAGGGAGTTATGTTTGTGATGTTTCGGATAGGGGGGTTTTGGA
GGGGGTTGTGGGGAGGGTGAGGCAGGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011077CBS51388_011077Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011077-T1CBS51388_011077-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011077-T1.cdsCBS51388_011077-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011077-T1.exon2CBS51388_011077-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011077-T1.exon1CBS51388_011077-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1172110..1173375 -
Powered by Drupal