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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1228360..1230225+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011098-T1 ID=CBS51388_011098-T1|Name=CBS51388_011098-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1866bp|location=Sequence derived from alignment at An18:1228360..1230225+ (Aspergillus niger CBS 513.88)
ATGGCTAGGAAACTTCGTGCGGCTGCTCAAGCAGCTGCGCAATCAATGCG
TACGTGACTTGCTTGGTTTCCACCTCAACCCTTTCCTTGGCCGCTGCGGC
CTCGGTCGTCACGGACGCGAACAACTAATTACCCAGTAGGGAATGCCGCC
CCTCCGCTCCCCGATGCCTCGGACGAGGAGATGATCGAAGCACCCCCATC
GCGTGGATCATCGCCAGCGATGGAAGATCCAGGAGATGCTTCGGATAAGG
ATCCTGAGGCGGAAGCCCAGGCAGAACCCAGCCAGGAGGAAGAGACAGCC
GCAACACCCGCCCAGGATTCAAACCCTCCATCGCGCGGCGACACTCCTTC
ACGCATGGGTGGCCGCATGTCAGCCATCCCGCGAAAGCGCCGCATAGGTC
GTCCCCCGAAGAACCGTCCCCCAGACTGGGATGCGCCTGATGACGGCGCC
CCTCAGACACCGATCCATACGTCCACGCCGGTCAAGCGCAGACGTGGTCG
TCCCGCTGCTAGTGGTGGAAGGTGGGCACGTAACCGAGGCCCGTCGCATG
TTACCCAGGTTCCGATCGACAAGGAGGGGAACATGATGGACGTTATCGAC
GACGAAGTTGCCCTCCCAGACGACCCCGAGGGCGAGACGAAGGTGGACAA
GAACGGCAATCTACTGGGCGATCGAGAATATAGGGTCCGTGTGTTTACGA
TTTTCAACCGTGGAGATCGCAAATACATGTTGTCTACTGAGCCTGCGCGA
TGCATTGGTTTCAGGGACTCGTACCTTTTCTTCCAGAAGCACAAACTACT
GTATAAAATCATCATCGACGACGAGGCGAAACGCGACCTCATTGAACGGG
AAATTATCCCCCACTCTTACAAAGGCCGAGCTATCGGTGTCGTCACCGCT
CGGTCTGTCTTCCGCGAATTCGGCGCAAAGATTATCGTTGGTGGAAAGAA
GGTCACCGATGATTACCATACACAGGCCGCGAGGGAGCGTGGAGATGTCG
AGGGCGAACTTGCCGTCCCTGAAGATAAGCTCCCTCCTCCAGGCGAACCT
TACAACAAGAACCAGTATGTAGCCTGGCACGGTGCCAGTAGTGTCTATCA
CACCAGCGCCCCGTCGGTGCCTTTGCCCACCGGAAAGGCGGTGGATTCGA
AGAAGCGCAAGGTCACGGTTACTGGCGATAACTGGATGCTCGAACATGCT
CGAGAGGCAAGGTATGTGATGACAAGCCTGTCTGACACTATAGTGACTAA
CTTTACATGTAGCAACTTCAACTCGCTCATATCGCTTGCGCGCCGCGAAA
ACCTTGAAGGACAGTACGACATCCATACAAACGTCATGCAGTACCCCAAG
ATCATGCAACCGACTCATGCCCGCTGGGAGCGTCTGCCTCCTCCCGACCC
TCGAGTTGCAACCAAATTAGCTCAGGGCATGTCCACGTTGAGCCTGACGA
ACGGCACCGGCGAAGCAGAGCCAGCTTCTGCGGACAAAGAAGCCCAGGAA
CCCAGCGACAGCCAAACCGAACATCAAACCACCGAGTCTACCCTCTTCTC
CTCAGTTCCGGCTGCGCTTTCCCGCCGATTTGCCATTCATGACATTCAGT
TCGAATCTTCGCCGTATTCCAACCTGGGCGTTCCCGGCCCAGACGGCGAT
GTGCACGATCTCGGCTCCAACGGCCTCATCAGTGTCGCAGACTCCGCAAA
TCCCGAGTTTACGAGCCCCGAAATCCTGGAGGAACTTCCTCCTGAGTGCA
AGGAAGCCCTTATCGAGGCGGCTGCGCAAGAGTGGGAATGGAAATCCAAG
TGGTGCCACGAAGCGAACGACGGGGCTCGCGCCAAATTACTCAAGAGTTA
CGCTTGGTTTCCATGA back to topCoding sequence (CDS) from alignment at An18:1228360..1230225+ >CBS51388_011098-T1 ID=CBS51388_011098-T1|Name=CBS51388_011098-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5175bp|location=Sequence derived from alignment at An18:1228360..1230225+ (Aspergillus niger CBS 513.88)
ATGGCTAGGAAACTTCGTGCGGCTGCTCAAGCAGCTGCGCAATCAATGCG
GAATGCCGCCCCTCCGCTCCCCGATGCCTCGGACGAGGAGATGATCGAAG
CACCCCCATCGCGTGGATCATCGCCAGCGATGGAAGATCCAGGAGATGCT
TCGGATAAGGATCCTGAGGCGGAAGCCCAGGCAGAACCCAGCCAGGAGGA
AGAGACAGCCGCAACACCCGCCCAGGATTCAAACCCTCCATCGCGCGGCG
ACACTCCTTCACGCATGGGTGGCCGCATGTCAGCCATCCCGCGAAAGCGC
CGCATAGGTCGTCCCCCGAAGAACCGTCCCCCAGACTGGGATGCGCCTGA
TGACGGCGCCCCTCAGACACCGATCCATACGTCCACGCCGGTCAAGCGCA
GACGTGGTCGTCCCGCTGCTAGTGGTGGAAGGTGGGCACGTAACCGAGGC
CCGTCGCATGTTACCCAGGTTCCGATCGACAAGGAGGGGAACATGATGGA
CGTTATCGACGACGAAGTTGCCCTCCCAGACGACCCCGAGGGCGAGACGA
AGGTGGACAAGAACGGCAATCTACTGGGCGATCGAGAATATAGGGTCCGT
GTGTTTACGATTTTCAACCGTGGAGATCGCAAATACATGTTGTCTACTGA
GCCTGCGCGATGCATTGGTTTCAGGGACTCGTACCTTTTCTTCCAGAAGC
ACAAACTACTGTATAAAATCATCATCGACGACGAGGCGAAACGCGACCTC
ATTGAACGGGAAATTATCCCCCACTCTTACAAAGGCCGAGCTATCGGTGT
CGTCACCGCTCGGTCTGTCTTCCGCGAATTCGGCGCAAAGATTATCGTTG
GTGGAAAGAAGGTCACCGATGATTACCATACACAGGCCGCGAGGGAGCGT
GGAGATGTCGAGGGCGAACTTGCCGTCCCTGAAGATAAGCTCCCTCCTCC
AGGCGAACCTTACAACAAGAACCAGTATGTAGCCTGGCACGGTGCCAGTA
GTGTCTATCACACCAGCGCCCCGTCGGTGCCTTTGCCCACCGGAAAGGCG
GTGGATTCGAAGAAGCGCAAGGTCACGGTTACTGGCGATAACTGGATGCT
CGAACATGCTCGAGAGGCAAGCAACTTCAACTCGCTCATATCGCTTGCGC
GCCGCGAAAACCTTGAAGGACAGTACGACATCCATACAAACGTCATGCAG
TACCCCAAGATCATGCAACCGACTCATGCCCGCTGGGAGCGTCTGCCTCC
TCCCGACCCTCGAGTTGCAACCAAATTAGCTCAGGGCATGTCCACGTTGA
GCCTGACGAACGGCACCGGCGAAGCAGAGCCAGCTTCTGCGGACAAAGAA
GCCCAGGAACCCAGCGACAGCCAAACCGAACATCAAACCACCGAGTCTAC
CCTCTTCTCCTCAGTTCCGGCTGCGCTTTCCCGCCGATTTGCCATTCATG
ACATTCAGTTCGAATCTTCGCCGTATTCCAACCTGGGCGTTCCCGGCCCA
GACGGCGATGTGCACGATCTCGGCTCCAACGGCCTCATCAGTGTCGCAGA
CTCCGCAAATCCCGAGTTTACGAGCCCCGAAATCCTGGAGGAACTTCCTC
CTGAGTGCAAGGAAGCCCTTATCGAGGCGGCTGCGCAAGAGTGGGAATGG
AAATCCAAGTGGTGCCACGAAGCGAACGACGGGGCTCGCGCCAAATTACT
CAAGAGTTACGCTTGGTTTCCATGAATGGCTAGGAAACTTCGTGCGGCTG
CTCAAGCAGCTGCGCAATCAATGCGGAATGCCGCCCCTCCGCTCCCCGAT
GCCTCGGACGAGGAGATGATCGAAGCACCCCCATCGCGTGGATCATCGCC
AGCGATGGAAGATCCAGGAGATGCTTCGGATAAGGATCCTGAGGCGGAAG
CCCAGGCAGAACCCAGCCAGGAGGAAGAGACAGCCGCAACACCCGCCCAG
GATTCAAACCCTCCATCGCGCGGCGACACTCCTTCACGCATGGGTGGCCG
CATGTCAGCCATCCCGCGAAAGCGCCGCATAGGTCGTCCCCCGAAGAACC
GTCCCCCAGACTGGGATGCGCCTGATGACGGCGCCCCTCAGACACCGATC
CATACGTCCACGCCGGTCAAGCGCAGACGTGGTCGTCCCGCTGCTAGTGG
TGGAAGGTGGGCACGTAACCGAGGCCCGTCGCATGTTACCCAGGTTCCGA
TCGACAAGGAGGGGAACATGATGGACGTTATCGACGACGAAGTTGCCCTC
CCAGACGACCCCGAGGGCGAGACGAAGGTGGACAAGAACGGCAATCTACT
GGGCGATCGAGAATATAGGGTCCGTGTGTTTACGATTTTCAACCGTGGAG
ATCGCAAATACATGTTGTCTACTGAGCCTGCGCGATGCATTGGTTTCAGG
GACTCGTACCTTTTCTTCCAGAAGCACAAACTACTGTATAAAATCATCAT
CGACGACGAGGCGAAACGCGACCTCATTGAACGGGAAATTATCCCCCACT
CTTACAAAGGCCGAGCTATCGGTGTCGTCACCGCTCGGTCTGTCTTCCGC
GAATTCGGCGCAAAGATTATCGTTGGTGGAAAGAAGGTCACCGATGATTA
CCATACACAGGCCGCGAGGGAGCGTGGAGATGTCGAGGGCGAACTTGCCG
TCCCTGAAGATAAGCTCCCTCCTCCAGGCGAACCTTACAACAAGAACCAG
TATGTAGCCTGGCACGGTGCCAGTAGTGTCTATCACACCAGCGCCCCGTC
GGTGCCTTTGCCCACCGGAAAGGCGGTGGATTCGAAGAAGCGCAAGGTCA
CGGTTACTGGCGATAACTGGATGCTCGAACATGCTCGAGAGGCAAGCAAC
TTCAACTCGCTCATATCGCTTGCGCGCCGCGAAAACCTTGAAGGACAGTA
CGACATCCATACAAACGTCATGCAGTACCCCAAGATCATGCAACCGACTC
ATGCCCGCTGGGAGCGTCTGCCTCCTCCCGACCCTCGAGTTGCAACCAAA
TTAGCTCAGGGCATGTCCACGTTGAGCCTGACGAACGGCACCGGCGAAGC
AGAGCCAGCTTCTGCGGACAAAGAAGCCCAGGAACCCAGCGACAGCCAAA
CCGAACATCAAACCACCGAGTCTACCCTCTTCTCCTCAGTTCCGGCTGCG
CTTTCCCGCCGATTTGCCATTCATGACATTCAGTTCGAATCTTCGCCGTA
TTCCAACCTGGGCGTTCCCGGCCCAGACGGCGATGTGCACGATCTCGGCT
CCAACGGCCTCATCAGTGTCGCAGACTCCGCAAATCCCGAGTTTACGAGC
CCCGAAATCCTGGAGGAACTTCCTCCTGAGTGCAAGGAAGCCCTTATCGA
GGCGGCTGCGCAAGAGTGGGAATGGAAATCCAAGTGGTGCCACGAAGCGA
ACGACGGGGCTCGCGCCAAATTACTCAAGAGTTACGCTTGGTTTCCATGA
ATGGCTAGGAAACTTCGTGCGGCTGCTCAAGCAGCTGCGCAATCAATGCG
GAATGCCGCCCCTCCGCTCCCCGATGCCTCGGACGAGGAGATGATCGAAG
CACCCCCATCGCGTGGATCATCGCCAGCGATGGAAGATCCAGGAGATGCT
TCGGATAAGGATCCTGAGGCGGAAGCCCAGGCAGAACCCAGCCAGGAGGA
AGAGACAGCCGCAACACCCGCCCAGGATTCAAACCCTCCATCGCGCGGCG
ACACTCCTTCACGCATGGGTGGCCGCATGTCAGCCATCCCGCGAAAGCGC
CGCATAGGTCGTCCCCCGAAGAACCGTCCCCCAGACTGGGATGCGCCTGA
TGACGGCGCCCCTCAGACACCGATCCATACGTCCACGCCGGTCAAGCGCA
GACGTGGTCGTCCCGCTGCTAGTGGTGGAAGGTGGGCACGTAACCGAGGC
CCGTCGCATGTTACCCAGGTTCCGATCGACAAGGAGGGGAACATGATGGA
CGTTATCGACGACGAAGTTGCCCTCCCAGACGACCCCGAGGGCGAGACGA
AGGTGGACAAGAACGGCAATCTACTGGGCGATCGAGAATATAGGGTCCGT
GTGTTTACGATTTTCAACCGTGGAGATCGCAAATACATGTTGTCTACTGA
GCCTGCGCGATGCATTGGTTTCAGGGACTCGTACCTTTTCTTCCAGAAGC
ACAAACTACTGTATAAAATCATCATCGACGACGAGGCGAAACGCGACCTC
ATTGAACGGGAAATTATCCCCCACTCTTACAAAGGCCGAGCTATCGGTGT
CGTCACCGCTCGGTCTGTCTTCCGCGAATTCGGCGCAAAGATTATCGTTG
GTGGAAAGAAGGTCACCGATGATTACCATACACAGGCCGCGAGGGAGCGT
GGAGATGTCGAGGGCGAACTTGCCGTCCCTGAAGATAAGCTCCCTCCTCC
AGGCGAACCTTACAACAAGAACCAGTATGTAGCCTGGCACGGTGCCAGTA
GTGTCTATCACACCAGCGCCCCGTCGGTGCCTTTGCCCACCGGAAAGGCG
GTGGATTCGAAGAAGCGCAAGGTCACGGTTACTGGCGATAACTGGATGCT
CGAACATGCTCGAGAGGCAAGCAACTTCAACTCGCTCATATCGCTTGCGC
GCCGCGAAAACCTTGAAGGACAGTACGACATCCATACAAACGTCATGCAG
TACCCCAAGATCATGCAACCGACTCATGCCCGCTGGGAGCGTCTGCCTCC
TCCCGACCCTCGAGTTGCAACCAAATTAGCTCAGGGCATGTCCACGTTGA
GCCTGACGAACGGCACCGGCGAAGCAGAGCCAGCTTCTGCGGACAAAGAA
GCCCAGGAACCCAGCGACAGCCAAACCGAACATCAAACCACCGAGTCTAC
CCTCTTCTCCTCAGTTCCGGCTGCGCTTTCCCGCCGATTTGCCATTCATG
ACATTCAGTTCGAATCTTCGCCGTATTCCAACCTGGGCGTTCCCGGCCCA
GACGGCGATGTGCACGATCTCGGCTCCAACGGCCTCATCAGTGTCGCAGA
CTCCGCAAATCCCGAGTTTACGAGCCCCGAAATCCTGGAGGAACTTCCTC
CTGAGTGCAAGGAAGCCCTTATCGAGGCGGCTGCGCAAGAGTGGGAATGG
AAATCCAAGTGGTGCCACGAAGCGAACGACGGGGCTCGCGCCAAATTACT
CAAGAGTTACGCTTGGTTTCCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013933 |
| DBxref | PFAM:PF08624 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1228360..1230225 + |
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