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CBS51388_011121-T1, CBS51388_011121-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011121-T1
Unique NameCBS51388_011121-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1287927..1288748+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011121-T1 ID=CBS51388_011121-T1|Name=CBS51388_011121-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=822bp|location=Sequence derived from alignment at An18:1287927..1288748+ (Aspergillus niger CBS 513.88)
ATGTTCCGCTCCGCCGTCGTCCGCTCCCTCAGGGCCTCTGTCCCTCGTGC
CGTCAAGACTCCGGCTCCCTTCCAGATCCGTAGCTCTCCTGTCGCTCGCC
CGGCTCAATTCGCCCCTCGCTTTGCCTACCAGGGTGTCAGACTCTACTCC
GCTCCCGCCGGTCTCAACAAGGACGAGGTTGAGGGTCGGATAGTCAACCT
TCTGAAGAACTTTGACAAGGTGCGTTCGCAATCGCGCGTTTCCAACTCGT
CGCTCAAGGCGAGGAATTGCAAGCCATCAAGAAATAAAAAAGCACAGTAA
CTGACAGGCTGGGATTATTACAGGTCTCCGATGCTAGCAAGGTTAGTTTG
GATACCCGATGACGCCCGAAGTCATTGGCCGGAATTTCCCGCGGGTAAAG
AATCATAGCTTAACGGTTGCCATTCCACAGATCAACGGTGCCTCTCACTT
CGCAAATGACCTCGGCCTGGACAGCTTGGATACCGTTGAGGTCGTCATGG
CCATCGAGGAGGTATGGATATTGAATATACCCAGATTTATACATAACGTT
GTATACTGATAGGGATGTCTATAGGAGTTCAGCATTGAGATCCCCGACAA
GGAGGCCGACTCCATCCACAGCGGTAAGTACAGCTTTGGGATACGATGCC
CTTGTAGGGTATTGCGACGCCGGAGGACATTTACTGACTATCCCTTCTGC
TATAGTTGACAAGGCTGTTGAGTACATCCTTGGCCAGCCCGATGGTAAGC
TTAACACCCTTGCTTGTGCAATTGAATCCATCCTGCGGGAATTCAGTACT
GACTACTCTGCTAGCTCACTAA
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Coding sequence (CDS) from alignment at An18:1287927..1288748+

>CBS51388_011121-T1 ID=CBS51388_011121-T1|Name=CBS51388_011121-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2484bp|location=Sequence derived from alignment at An18:1287927..1288748+ (Aspergillus niger CBS 513.88)
ATGTTCCGCTCCGCCGTCGTCCGCTCCCTCAGGGCCTCTGTCCCTCGTGC
CGTCAAGACTCCGGCTCCCTTCCAGATCCGTAGCTCTCCTGTCGCTCGCC
CGGCTCAATTCGCCCCTCGCTTTGCCTACCAGGGTGTCAGACTCTACTCC
GCTCCCGCCGGTCTCAACAAGGACGAGGTTGAGGGTCGGATAGTCAACCT
TCTGAAGAACTTTGACAAGGTCTCCGATGCTAGCAAGATCAACGGTGCCT
CTCACTTCGCAAATGACCTCGGCCTGGACAGCTTGGATACCGTTGAGGTC
GTCATGGCCATCGAGGAGGAGTTCAGCATTGAGATCCCCGACAAGGAGGC
CGACTCCATCCACAGCGTTGACAAGGCTGTTGAGTACATCCTTGGCCAGC
CCGATGCTCACTAAATGTTCCGCTCCGCCGTCGTCCGCTCCCTCAGGGCC
TCTGTCCCTCGTGCCGTCAAGACTCCGGCTCCCTTCCAGATCCGTAGCTC
TCCTGTCGCTCGCCCGGCTCAATTCGCCCCTCGCTTTGCCTACCAGGGTG
TCAGACTCTACTCCGCTCCCGCCGGTCTCAACAAGGACGAGGTTGAGGGT
CGGATAGTCAACCTTCTGAAGAACTTTGACAAGGTCTCCGATGCTAGCAA
GATCAACGGTGCCTCTCACTTCGCAAATGACCTCGGCCTGGACAGCTTGG
ATACCGTTGAGGTCGTCATGGCCATCGAGGAGGAGTTCAGCATTGAGATC
CCCGACAAGGAGGCCGACTCCATCCACAGCGTTGACAAGGCTGTTGAGTA
CATCCTTGGCCAGCCCGATGCTCACTAAATGTTCCGCTCCGCCGTCGTCC
GCTCCCTCAGGGCCTCTGTCCCTCGTGCCGTCAAGACTCCGGCTCCCTTC
CAGATCCGTAGCTCTCCTGTCGCTCGCCCGGCTCAATTCGCCCCTCGCTT
TGCCTACCAGGGTGTCAGACTCTACTCCGCTCCCGCCGGTCTCAACAAGG
ACGAGGTTGAGGGTCGGATAGTCAACCTTCTGAAGAACTTTGACAAGGTC
TCCGATGCTAGCAAGATCAACGGTGCCTCTCACTTCGCAAATGACCTCGG
CCTGGACAGCTTGGATACCGTTGAGGTCGTCATGGCCATCGAGGAGGAGT
TCAGCATTGAGATCCCCGACAAGGAGGCCGACTCCATCCACAGCGTTGAC
AAGGCTGTTGAGTACATCCTTGGCCAGCCCGATGCTCACTAAATGTTCCG
CTCCGCCGTCGTCCGCTCCCTCAGGGCCTCTGTCCCTCGTGCCGTCAAGA
CTCCGGCTCCCTTCCAGATCCGTAGCTCTCCTGTCGCTCGCCCGGCTCAA
TTCGCCCCTCGCTTTGCCTACCAGGGTGTCAGACTCTACTCCGCTCCCGC
CGGTCTCAACAAGGACGAGGTTGAGGGTCGGATAGTCAACCTTCTGAAGA
ACTTTGACAAGGTCTCCGATGCTAGCAAGATCAACGGTGCCTCTCACTTC
GCAAATGACCTCGGCCTGGACAGCTTGGATACCGTTGAGGTCGTCATGGC
CATCGAGGAGGAGTTCAGCATTGAGATCCCCGACAAGGAGGCCGACTCCA
TCCACAGCGTTGACAAGGCTGTTGAGTACATCCTTGGCCAGCCCGATGCT
CACTAAATGTTCCGCTCCGCCGTCGTCCGCTCCCTCAGGGCCTCTGTCCC
TCGTGCCGTCAAGACTCCGGCTCCCTTCCAGATCCGTAGCTCTCCTGTCG
CTCGCCCGGCTCAATTCGCCCCTCGCTTTGCCTACCAGGGTGTCAGACTC
TACTCCGCTCCCGCCGGTCTCAACAAGGACGAGGTTGAGGGTCGGATAGT
CAACCTTCTGAAGAACTTTGACAAGGTCTCCGATGCTAGCAAGATCAACG
GTGCCTCTCACTTCGCAAATGACCTCGGCCTGGACAGCTTGGATACCGTT
GAGGTCGTCATGGCCATCGAGGAGGAGTTCAGCATTGAGATCCCCGACAA
GGAGGCCGACTCCATCCACAGCGTTGACAAGGCTGTTGAGTACATCCTTG
GCCAGCCCGATGCTCACTAAATGTTCCGCTCCGCCGTCGTCCGCTCCCTC
AGGGCCTCTGTCCCTCGTGCCGTCAAGACTCCGGCTCCCTTCCAGATCCG
TAGCTCTCCTGTCGCTCGCCCGGCTCAATTCGCCCCTCGCTTTGCCTACC
AGGGTGTCAGACTCTACTCCGCTCCCGCCGGTCTCAACAAGGACGAGGTT
GAGGGTCGGATAGTCAACCTTCTGAAGAACTTTGACAAGGTCTCCGATGC
TAGCAAGATCAACGGTGCCTCTCACTTCGCAAATGACCTCGGCCTGGACA
GCTTGGATACCGTTGAGGTCGTCATGGCCATCGAGGAGGAGTTCAGCATT
GAGATCCCCGACAAGGAGGCCGACTCCATCCACAGCGTTGACAAGGCTGT
TGAGTACATCCTTGGCCAGCCCGATGCTCACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011121CBS51388_011121Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011121-T1CBS51388_011121-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011121-T1.exon1CBS51388_011121-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011121-T1.exon2CBS51388_011121-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011121-T1.exon3CBS51388_011121-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011121-T1.exon4CBS51388_011121-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_011121-T1.exon5CBS51388_011121-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_011121-T1.exon6CBS51388_011121-T1.exon6Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011121-T1.cdsCBS51388_011121-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR006162
DBxrefInterPro:IPR036736
DBxrefInterPro:IPR003231
DBxrefInterPro:IPR009081
DBxrefPFAM:PF00550
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1287927..1288748 +
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