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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1340628..1341387+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011140-T1 ID=CBS51388_011140-T1|Name=CBS51388_011140-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=760bp|location=Sequence derived from alignment at An18:1340628..1341387+ (Aspergillus niger CBS 513.88)
ATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGA
TGACGGCATCGAGGTCACCGTACGTATTGACCCTTGATTTCAACCCGGGC
ATTGGAATGGCAGGCAAGGATAAGACAAAGTGCTGGGAGAGAGCAGGAAA
AAATAAAGGGTGTCGCGAGAAAGAGATGGATCTGGAGGATATCAAGGATT
CGGAACATGCAACAATTGCCGGGTTGAAAAATGCAAGGTTACAGGATCAA
ATTTGGACTAATAATGCAATTTCTTGAATATAGGCCGACAAGCTCCAGAC
TCTCCTGTCTGCCGCCAAGGTTCCCGAGGTTGAGCCCATCTGGACTTCCA
TCTTCGCCAAGGTAAATTAAATCCGTCCAAGCTTCGCAACACATCTCAGT
TTCATCATCGCATGCGATTCGCGATTCACCCGATTATCAATCATCACCAC
CCTGGAATCAAACACAAAACTTACACGTCGGTTTTTTCCAATAGGCTCTC
GAGGGCAAGGACATCAAGGAGCTCCTGACCAACGTCGGCTCCGCTGGCCC
TGCCGCCCCCGCTGCTGCCGCCGGTGGTGCTGCTGCCCCCGCTGAGGCTG
CTGCCGCTGAGGAGAAGAAGGAAGAAGGTACGGAACATCCAACATACCCA
TTGTCTTGGCGATTGCAATGGCAGGGCATAGGAAAAGGAACACTTGGACT
AACTTCTATACAGAGAAGGAGGAGTCCGACGAGGACATGGGCTTCGGTCT
TTTCGACTAA back to topCoding sequence (CDS) from alignment at An18:1340628..1341387+ >CBS51388_011140-T1 ID=CBS51388_011140-T1|Name=CBS51388_011140-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1308bp|location=Sequence derived from alignment at An18:1340628..1341387+ (Aspergillus niger CBS 513.88)
ATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGA
TGACGGCATCGAGGTCACCGCCGACAAGCTCCAGACTCTCCTGTCTGCCG
CCAAGGTTCCCGAGGTTGAGCCCATCTGGACTTCCATCTTCGCCAAGGCT
CTCGAGGGCAAGGACATCAAGGAGCTCCTGACCAACGTCGGCTCCGCTGG
CCCTGCCGCCCCCGCTGCTGCCGCCGGTGGTGCTGCTGCCCCCGCTGAGG
CTGCTGCCGCTGAGGAGAAGAAGGAAGAAGAGAAGGAGGAGTCCGACGAG
GACATGGGCTTCGGTCTTTTCGACTAAATGTCTACTGCCGAGCTCGCTTG
CTCCTACGCCGCCCTCATCCTCGCCGATGACGGCATCGAGGTCACCGCCG
ACAAGCTCCAGACTCTCCTGTCTGCCGCCAAGGTTCCCGAGGTTGAGCCC
ATCTGGACTTCCATCTTCGCCAAGGCTCTCGAGGGCAAGGACATCAAGGA
GCTCCTGACCAACGTCGGCTCCGCTGGCCCTGCCGCCCCCGCTGCTGCCG
CCGGTGGTGCTGCTGCCCCCGCTGAGGCTGCTGCCGCTGAGGAGAAGAAG
GAAGAAGAGAAGGAGGAGTCCGACGAGGACATGGGCTTCGGTCTTTTCGA
CTAAATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCG
CCGATGACGGCATCGAGGTCACCGCCGACAAGCTCCAGACTCTCCTGTCT
GCCGCCAAGGTTCCCGAGGTTGAGCCCATCTGGACTTCCATCTTCGCCAA
GGCTCTCGAGGGCAAGGACATCAAGGAGCTCCTGACCAACGTCGGCTCCG
CTGGCCCTGCCGCCCCCGCTGCTGCCGCCGGTGGTGCTGCTGCCCCCGCT
GAGGCTGCTGCCGCTGAGGAGAAGAAGGAAGAAGAGAAGGAGGAGTCCGA
CGAGGACATGGGCTTCGGTCTTTTCGACTAAATGTCTACTGCCGAGCTCG
CTTGCTCCTACGCCGCCCTCATCCTCGCCGATGACGGCATCGAGGTCACC
GCCGACAAGCTCCAGACTCTCCTGTCTGCCGCCAAGGTTCCCGAGGTTGA
GCCCATCTGGACTTCCATCTTCGCCAAGGCTCTCGAGGGCAAGGACATCA
AGGAGCTCCTGACCAACGTCGGCTCCGCTGGCCCTGCCGCCCCCGCTGCT
GCCGCCGGTGGTGCTGCTGCCCCCGCTGAGGCTGCTGCCGCTGAGGAGAA
GAAGGAAGAAGAGAAGGAGGAGTCCGACGAGGACATGGGCTTCGGTCTTT
TCGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006414 | translational elongation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027534 |
| DBxref | InterPro:IPR038716 |
| DBxref | PFAM:PF00428 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1340628..1341387 + |
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