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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1413137..1415454- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011161-T1 ID=CBS51388_011161-T1|Name=CBS51388_011161-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2318bp|location=Sequence derived from alignment at An18:1413137..1415454- (Aspergillus niger CBS 513.88)
ATGTCTTTCCAGGCCCCTCGGAACAGTTCTCCATTTTCGTCTCAGCAACC
GTTCCAGAATAACTACTGGCGTGCTAGTCGAAGCCCTGGGACCAACGGGC
TGCCTGGCTATGGGTTTTCGCCACCGACTGGTATCTCCAACTCCCTGAAC
AATCCCCTCGCCGGCGACCGCACTCTCCCCATGTACAAGGACAAACCTTA
CTTCGCACCACGACGCACCGGTCCGAGAGCCAGGCGGCGGAAGATCATAT
ATAGTGGGCTATGTCTGTTCGTCCTGCTCGCTCTGTGGTACTACTCTGGC
TCTGGTAAGCCGGAATGGAAGACACCGGACGCGGAGAAGGGCGCCGAGCT
CTGGAAGTGGGTGCAAAGTTTTGAGGAGTCGGAACCACCATACGATGGCA
GCGCAGCGACAGAGAAGATTGACTGGGAAGCAAGGAGGGAGAAAGTGCGC
GACGTCTTCATTGTCAGTTGGGATGGTTATGCGGCTAATGCGTGGGGTGA
GTTTCTGGCTGGAATTAACCTCTTGATTCTTGGATGTGGTGACTGACAAT
GGCTTTGTCTGCCGGTGATTAGGTTACGATGAATACCACCCAATTGCCAA
AAACGGTCGGCACATGATTGAAGGAGGAATGGGGTGGATAATTGTTGATG
CGCTGGACACTTTGATGATTATGAACCTGACGTCGCGAGTGCAACATGCC
CGCAGCTGGATCCACAACTCGTTGCAATACAACCAGGACCACGATGTGAA
TACCTTCGAGACTACCATTCGCATGCTGGGAGGCTTACTCTCCGCACACT
ATCTCTCCACGAACTATCCCGAGCTAGCTCCGCTTACGGATGACGATACA
GGCGCGCCGGGAGAAGACTTGTATATCGAGAAGGCCACCGATCTGGCAGA
TCGTCTATTGGGTGCTTTTGAATCCGGCACTGGAATCCCGTATGCAAGCA
TCAATTTGAACAAATCCGAGGGCCTTCCCTCGTACGCGGATAATGGCGCC
TCATCTACTGCCGAAGCCACTACTCTCCAGCTGGAGTTCAAGTACTTGGC
CAAACTGACGGGCGAGGCCGAGTACTGGCAGGCTGTGGAGAAGGTTATGG
AGGTCGTGGACGACCAGAAGATGGAAGACGGATTGCTTCCGATCTACGTA
TATCCAGAGACCGGCGAATTTAAAGGCGATAACATCCGTCTCGGCAGTAG
AGGCGATTCATACTATGGTATACATGATGGCTTTGTGCGTGAATATTCAA
TGCGCTGACCGATGTTTCCTAGAATACCTCATCAAGCAGTACCTTCAAAC
GCAAGAGACTGAACCGATCTACAAGGACATGTGGGATGAGTCCCTCGTCG
GCGTGCGCAAGCACCTGATCACCTATACACAGAACGCCAAGTTGACCGTT
CTGGGCGAACGCCCTGCCGGGCTGCATGGAGTCCTTTCCCCCAAGATGGA
CCACCTAGTCTGCTTCTACCCCGGCACCATCGCTCTCGCAGCAACTGGCG
GACGTCCTCTGTCCGAGGCAAGACAGTCACCCGATTGGGGCCAACGCCAG
GAGGAAGAGATTCTTCTAGCCCGAGAACTAACCAAGACCTGCTGGGCAAC
GTATCTAATCACGAAGACCGGCCTCGCACCAGAGATCACCTACTTCAATG
TCGACGACCCTCGCGTCATGGAAACAGACATGTACCCAGACTCGACCATT
GCCAAACCCAGCTCAGGCCAGCAAAAAGCCTCTGGCGAACTCCCCCTCCT
CTCCAAATCCATCTACCCCGTCAGCGACTACTCCACCAAATGGCGCGACG
ACCTCAACATCCACAAACAAGACCGCCACAACCTCCAACGCCCAGAGACC
GTCGAATCCCTCTTCTACATGTATCGCATCACCGGAGACGACATCTACCG
ACACTGGGGCTGGGAGATGTTCAAGTCTTTTGTCAAGCATACTGCCGTGG
TCGAGGACATCCCTGTCGATGAACTCAGCAAAGAAGACGCGTCCAGCTCA
ACATCATCATCGGAGGAAGAAGACGGCGGAACTCAGAAGCCAAAACCTCA
GAAAATCACGGGCTTCACCTCGCTCTCAAACGCTGATGACAACCCTCCAG
TGAAGCGCGACAACATGGAGAGTTTCTGGATGGCCGAGACGCTTAAATAC
TTCTACTTGCTATTCTCGGACCGCGACTTTATCTCTCTCGAAGACCATGT
ATTCAATACGGAGGCGCATCCTCTCCCGCGGTTCAAGCCAACGGGCGAGT
TGAAGACCGGGTGGATGAGGAAGAGTCGGACGATACCAACATCCAGTGAG
GTGGAGGAGTCGGTATAA back to topCoding sequence (CDS) from alignment at An18:1413137..1415454- >CBS51388_011161-T1 ID=CBS51388_011161-T1|Name=CBS51388_011161-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6561bp|location=Sequence derived from alignment at An18:1413137..1415454- (Aspergillus niger CBS 513.88)
AATACCTCATCAAGCAGTACCTTCAAACGCAAGAGACTGAACCGATCTAC
AAGGACATGTGGGATGAGTCCCTCGTCGGCGTGCGCAAGCACCTGATCAC
CTATACACAGAACGCCAAGTTGACCGTTCTGGGCGAACGCCCTGCCGGGC
TGCATGGAGTCCTTTCCCCCAAGATGGACCACCTAGTCTGCTTCTACCCC
GGCACCATCGCTCTCGCAGCAACTGGCGGACGTCCTCTGTCCGAGGCAAG
ACAGTCACCCGATTGGGGCCAACGCCAGGAGGAAGAGATTCTTCTAGCCC
GAGAACTAACCAAGACCTGCTGGGCAACGTATCTAATCACGAAGACCGGC
CTCGCACCAGAGATCACCTACTTCAATGTCGACGACCCTCGCGTCATGGA
AACAGACATGTACCCAGACTCGACCATTGCCAAACCCAGCTCAGGCCAGC
AAAAAGCCTCTGGCGAACTCCCCCTCCTCTCCAAATCCATCTACCCCGTC
AGCGACTACTCCACCAAATGGCGCGACGACCTCAACATCCACAAACAAGA
CCGCCACAACCTCCAACGCCCAGAGACCGTCGAATCCCTCTTCTACATGT
ATCGCATCACCGGAGACGACATCTACCGACACTGGGGCTGGGAGATGTTC
AAGTCTTTTGTCAAGCATACTGCCGTGGTCGAGGACATCCCTGTCGATGA
ACTCAGCAAAGAAGACGCGTCCAGCTCAACATCATCATCGGAGGAAGAAG
ACGGCGGAACTCAGAAGCCAAAACCTCAGAAAATCACGGGCTTCACCTCG
CTCTCAAACGCTGATGACAACCCTCCAGTGAAGCGCGACAACATGGAGAG
TTTCTGGATGGCCGAGACGCTTAAATACTTCTACTTGCTATTCTCGGACC
GCGACTTTATCTCTCTCGAAGACCATGTATTCAATACGGAGGCGCATCCT
CTCCCGCGGTTCAAGCCAACGGGCGAGTTGAAGACCGGGTGGATGAGGAA
GAGTCGGACGATACCAACATCCAGTGAGGTGGAGGAGTCGGTATAAGTTA
CGATGAATACCACCCAATTGCCAAAAACGGTCGGCACATGATTGAAGGAG
GAATGGGGTGGATAATTGTTGATGCGCTGGACACTTTGATGATTATGAAC
CTGACGTCGCGAGTGCAACATGCCCGCAGCTGGATCCACAACTCGTTGCA
ATACAACCAGGACCACGATGTGAATACCTTCGAGACTACCATTCGCATGC
TGGGAGGCTTACTCTCCGCACACTATCTCTCCACGAACTATCCCGAGCTA
GCTCCGCTTACGGATGACGATACAGGCGCGCCGGGAGAAGACTTGTATAT
CGAGAAGGCCACCGATCTGGCAGATCGTCTATTGGGTGCTTTTGAATCCG
GCACTGGAATCCCGTATGCAAGCATCAATTTGAACAAATCCGAGGGCCTT
CCCTCGTACGCGGATAATGGCGCCTCATCTACTGCCGAAGCCACTACTCT
CCAGCTGGAGTTCAAGTACTTGGCCAAACTGACGGGCGAGGCCGAGTACT
GGCAGGCTGTGGAGAAGGTTATGGAGGTCGTGGACGACCAGAAGATGGAA
GACGGATTGCTTCCGATCTACGTATATCCAGAGACCGGCGAATTTAAAGG
CGATAACATCCGTCTCGGCAGTAGAGGCGATTCATACTATGATGTCTTTC
CAGGCCCCTCGGAACAGTTCTCCATTTTCGTCTCAGCAACCGTTCCAGAA
TAACTACTGGCGTGCTAGTCGAAGCCCTGGGACCAACGGGCTGCCTGGCT
ATGGGTTTTCGCCACCGACTGGTATCTCCAACTCCCTGAACAATCCCCTC
GCCGGCGACCGCACTCTCCCCATGTACAAGGACAAACCTTACTTCGCACC
ACGACGCACCGGTCCGAGAGCCAGGCGGCGGAAGATCATATATAGTGGGC
TATGTCTGTTCGTCCTGCTCGCTCTGTGGTACTACTCTGGCTCTGGTAAG
CCGGAATGGAAGACACCGGACGCGGAGAAGGGCGCCGAGCTCTGGAAGTG
GGTGCAAAGTTTTGAGGAGTCGGAACCACCATACGATGGCAGCGCAGCGA
CAGAGAAGATTGACTGGGAAGCAAGGAGGGAGAAAGTGCGCGACGTCTTC
ATTGTCAGTTGGGATGGTTATGCGGCTAATGCGTGGGAATACCTCATCAA
GCAGTACCTTCAAACGCAAGAGACTGAACCGATCTACAAGGACATGTGGG
ATGAGTCCCTCGTCGGCGTGCGCAAGCACCTGATCACCTATACACAGAAC
GCCAAGTTGACCGTTCTGGGCGAACGCCCTGCCGGGCTGCATGGAGTCCT
TTCCCCCAAGATGGACCACCTAGTCTGCTTCTACCCCGGCACCATCGCTC
TCGCAGCAACTGGCGGACGTCCTCTGTCCGAGGCAAGACAGTCACCCGAT
TGGGGCCAACGCCAGGAGGAAGAGATTCTTCTAGCCCGAGAACTAACCAA
GACCTGCTGGGCAACGTATCTAATCACGAAGACCGGCCTCGCACCAGAGA
TCACCTACTTCAATGTCGACGACCCTCGCGTCATGGAAACAGACATGTAC
CCAGACTCGACCATTGCCAAACCCAGCTCAGGCCAGCAAAAAGCCTCTGG
CGAACTCCCCCTCCTCTCCAAATCCATCTACCCCGTCAGCGACTACTCCA
CCAAATGGCGCGACGACCTCAACATCCACAAACAAGACCGCCACAACCTC
CAACGCCCAGAGACCGTCGAATCCCTCTTCTACATGTATCGCATCACCGG
AGACGACATCTACCGACACTGGGGCTGGGAGATGTTCAAGTCTTTTGTCA
AGCATACTGCCGTGGTCGAGGACATCCCTGTCGATGAACTCAGCAAAGAA
GACGCGTCCAGCTCAACATCATCATCGGAGGAAGAAGACGGCGGAACTCA
GAAGCCAAAACCTCAGAAAATCACGGGCTTCACCTCGCTCTCAAACGCTG
ATGACAACCCTCCAGTGAAGCGCGACAACATGGAGAGTTTCTGGATGGCC
GAGACGCTTAAATACTTCTACTTGCTATTCTCGGACCGCGACTTTATCTC
TCTCGAAGACCATGTATTCAATACGGAGGCGCATCCTCTCCCGCGGTTCA
AGCCAACGGGCGAGTTGAAGACCGGGTGGATGAGGAAGAGTCGGACGATA
CCAACATCCAGTGAGGTGGAGGAGTCGGTATAAGTTACGATGAATACCAC
CCAATTGCCAAAAACGGTCGGCACATGATTGAAGGAGGAATGGGGTGGAT
AATTGTTGATGCGCTGGACACTTTGATGATTATGAACCTGACGTCGCGAG
TGCAACATGCCCGCAGCTGGATCCACAACTCGTTGCAATACAACCAGGAC
CACGATGTGAATACCTTCGAGACTACCATTCGCATGCTGGGAGGCTTACT
CTCCGCACACTATCTCTCCACGAACTATCCCGAGCTAGCTCCGCTTACGG
ATGACGATACAGGCGCGCCGGGAGAAGACTTGTATATCGAGAAGGCCACC
GATCTGGCAGATCGTCTATTGGGTGCTTTTGAATCCGGCACTGGAATCCC
GTATGCAAGCATCAATTTGAACAAATCCGAGGGCCTTCCCTCGTACGCGG
ATAATGGCGCCTCATCTACTGCCGAAGCCACTACTCTCCAGCTGGAGTTC
AAGTACTTGGCCAAACTGACGGGCGAGGCCGAGTACTGGCAGGCTGTGGA
GAAGGTTATGGAGGTCGTGGACGACCAGAAGATGGAAGACGGATTGCTTC
CGATCTACGTATATCCAGAGACCGGCGAATTTAAAGGCGATAACATCCGT
CTCGGCAGTAGAGGCGATTCATACTATGATGTCTTTCCAGGCCCCTCGGA
ACAGTTCTCCATTTTCGTCTCAGCAACCGTTCCAGAATAACTACTGGCGT
GCTAGTCGAAGCCCTGGGACCAACGGGCTGCCTGGCTATGGGTTTTCGCC
ACCGACTGGTATCTCCAACTCCCTGAACAATCCCCTCGCCGGCGACCGCA
CTCTCCCCATGTACAAGGACAAACCTTACTTCGCACCACGACGCACCGGT
CCGAGAGCCAGGCGGCGGAAGATCATATATAGTGGGCTATGTCTGTTCGT
CCTGCTCGCTCTGTGGTACTACTCTGGCTCTGGTAAGCCGGAATGGAAGA
CACCGGACGCGGAGAAGGGCGCCGAGCTCTGGAAGTGGGTGCAAAGTTTT
GAGGAGTCGGAACCACCATACGATGGCAGCGCAGCGACAGAGAAGATTGA
CTGGGAAGCAAGGAGGGAGAAAGTGCGCGACGTCTTCATTGTCAGTTGGG
ATGGTTATGCGGCTAATGCGTGGGAATACCTCATCAAGCAGTACCTTCAA
ACGCAAGAGACTGAACCGATCTACAAGGACATGTGGGATGAGTCCCTCGT
CGGCGTGCGCAAGCACCTGATCACCTATACACAGAACGCCAAGTTGACCG
TTCTGGGCGAACGCCCTGCCGGGCTGCATGGAGTCCTTTCCCCCAAGATG
GACCACCTAGTCTGCTTCTACCCCGGCACCATCGCTCTCGCAGCAACTGG
CGGACGTCCTCTGTCCGAGGCAAGACAGTCACCCGATTGGGGCCAACGCC
AGGAGGAAGAGATTCTTCTAGCCCGAGAACTAACCAAGACCTGCTGGGCA
ACGTATCTAATCACGAAGACCGGCCTCGCACCAGAGATCACCTACTTCAA
TGTCGACGACCCTCGCGTCATGGAAACAGACATGTACCCAGACTCGACCA
TTGCCAAACCCAGCTCAGGCCAGCAAAAAGCCTCTGGCGAACTCCCCCTC
CTCTCCAAATCCATCTACCCCGTCAGCGACTACTCCACCAAATGGCGCGA
CGACCTCAACATCCACAAACAAGACCGCCACAACCTCCAACGCCCAGAGA
CCGTCGAATCCCTCTTCTACATGTATCGCATCACCGGAGACGACATCTAC
CGACACTGGGGCTGGGAGATGTTCAAGTCTTTTGTCAAGCATACTGCCGT
GGTCGAGGACATCCCTGTCGATGAACTCAGCAAAGAAGACGCGTCCAGCT
CAACATCATCATCGGAGGAAGAAGACGGCGGAACTCAGAAGCCAAAACCT
CAGAAAATCACGGGCTTCACCTCGCTCTCAAACGCTGATGACAACCCTCC
AGTGAAGCGCGACAACATGGAGAGTTTCTGGATGGCCGAGACGCTTAAAT
ACTTCTACTTGCTATTCTCGGACCGCGACTTTATCTCTCTCGAAGACCAT
GTATTCAATACGGAGGCGCATCCTCTCCCGCGGTTCAAGCCAACGGGCGA
GTTGAAGACCGGGTGGATGAGGAAGAGTCGGACGATACCAACATCCAGTG
AGGTGGAGGAGTCGGTATAAGTTACGATGAATACCACCCAATTGCCAAAA
ACGGTCGGCACATGATTGAAGGAGGAATGGGGTGGATAATTGTTGATGCG
CTGGACACTTTGATGATTATGAACCTGACGTCGCGAGTGCAACATGCCCG
CAGCTGGATCCACAACTCGTTGCAATACAACCAGGACCACGATGTGAATA
CCTTCGAGACTACCATTCGCATGCTGGGAGGCTTACTCTCCGCACACTAT
CTCTCCACGAACTATCCCGAGCTAGCTCCGCTTACGGATGACGATACAGG
CGCGCCGGGAGAAGACTTGTATATCGAGAAGGCCACCGATCTGGCAGATC
GTCTATTGGGTGCTTTTGAATCCGGCACTGGAATCCCGTATGCAAGCATC
AATTTGAACAAATCCGAGGGCCTTCCCTCGTACGCGGATAATGGCGCCTC
ATCTACTGCCGAAGCCACTACTCTCCAGCTGGAGTTCAAGTACTTGGCCA
AACTGACGGGCGAGGCCGAGTACTGGCAGGCTGTGGAGAAGGTTATGGAG
GTCGTGGACGACCAGAAGATGGAAGACGGATTGCTTCCGATCTACGTATA
TCCAGAGACCGGCGAATTTAAAGGCGATAACATCCGTCTCGGCAGTAGAG
GCGATTCATACTATGATGTCTTTCCAGGCCCCTCGGAACAGTTCTCCATT
TTCGTCTCAGCAACCGTTCCAGAATAACTACTGGCGTGCTAGTCGAAGCC
CTGGGACCAACGGGCTGCCTGGCTATGGGTTTTCGCCACCGACTGGTATC
TCCAACTCCCTGAACAATCCCCTCGCCGGCGACCGCACTCTCCCCATGTA
CAAGGACAAACCTTACTTCGCACCACGACGCACCGGTCCGAGAGCCAGGC
GGCGGAAGATCATATATAGTGGGCTATGTCTGTTCGTCCTGCTCGCTCTG
TGGTACTACTCTGGCTCTGGTAAGCCGGAATGGAAGACACCGGACGCGGA
GAAGGGCGCCGAGCTCTGGAAGTGGGTGCAAAGTTTTGAGGAGTCGGAAC
CACCATACGATGGCAGCGCAGCGACAGAGAAGATTGACTGGGAAGCAAGG
AGGGAGAAAGTGCGCGACGTCTTCATTGTCAGTTGGGATGGTTATGCGGC
TAATGCGTGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH47 |
| DBxref | InterPro:IPR036026 |
| DBxref | InterPro:IPR001382 |
| DBxref | PFAM:PF01532 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1413137..1415454 - |
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