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CBS51388_011188-T1, CBS51388_011188-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011188-T1
Unique NameCBS51388_011188-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1492042..1493321-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011188-T1 ID=CBS51388_011188-T1|Name=CBS51388_011188-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1280bp|location=Sequence derived from alignment at An18:1492042..1493321- (Aspergillus niger CBS 513.88)
ATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCA
TTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATG
TGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTC
AAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGG
GCGTATCGTTACTTGTTCTCAGGGTAAGTTAACCCCCTCTCCCTTGTCCT
GCAATAGTTCCGTCTAAGTGACCACGGGAACAGACCGCAACGCCTACGTC
TGGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGAT
AAACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAGCAGAAGTTCG
CTGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAG
AATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTAT
TACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGA
CTGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACG
CGCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTG
TGGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCT
CTCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACC
GTCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCAT
CGCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACG
AGATCATCGCCGCAGGCCACGTATGTCTTCTAAACAATCAATTTCAGCAG
ATGATCCAGTACGACACGTGTCGCTAACAGGAATTAACAGGATTGCGAAC
CGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCATT
GAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCT
TAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACCC
AACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGAG
GAGGCCGATGGCGTCGTTCGCAAGTTCAGCAGTAAGAGATGCTCCCCTGC
TAAGTTGTCCTGTGGGTTGCGCTAACATTTAGATAATAGCGAGCGGAGTC
GATGGCCGTGTTGTTATCTGGACCATCTAG
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Coding sequence (CDS) from alignment at An18:1492042..1493321-

>CBS51388_011188-T1 ID=CBS51388_011188-T1|Name=CBS51388_011188-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4368bp|location=Sequence derived from alignment at An18:1492042..1493321- (Aspergillus niger CBS 513.88)
CGAGCGGAGTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAA
CCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCAT
TGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTC
TTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACC
CAACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGA
GGAGGCCGATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCT
GGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATA
AACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAGCAGAAGTTCGC
TGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGA
ATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATT
ACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGAC
TGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGC
GCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGT
GGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTC
TCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCG
TCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATC
GCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGA
GATCATCGCCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCC
ACAACCCAATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCA
GTTGCGCGGGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTT
CTCGTTGACCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGG
ATATCGCTCCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGA
GTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCG
CCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCA
AGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATG
TTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAA
GACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCG
ATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGG
ACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGC
TGCTACATTTGTACGGTGGTCACCATCTGAGCAGAAGTTCGCTGTTGGAT
CTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGG
TGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCT
TGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCC
ATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAG
CCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATT
CTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTG
GAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATAT
CCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCG
TCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCG
CCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCA
ATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCG
GGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGA
CCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCT
CCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGG
CCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCG
GTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGG
CCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCA
AATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGC
ATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTC
GTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCAC
GGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACAT
TTGTACGGTGGTCACCATCTGAGCAGAAGTTCGCTGTTGGATCTGGTGCT
CGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTC
GAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGC
ATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGG
GTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGC
CTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATG
ACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCG
CTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGC
GCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGC
CTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGC
CACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGA
TCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACA
ATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAA
CTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAG
TGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGGCCGTGTTG
TTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCGGTGACGAG
AACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGGCCGGGTGC
TGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCAAATGGATC
TTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGCATCAGAAT
ACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTCGTTCGCAA
GTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCACGGGTTGGA
AGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACATTTGTACGG
TGGTCACCATCTGAGCAGAAGTTCGCTGTTGGATCTGGTGCTCGCGTGAT
CGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTCGAAGCACT
TGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGCATCCAAAC
TCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGGGTGCTTTC
TAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCCTGGGGTG
AACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATGACTCGGCG
GGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGCTTGCCTT
TACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGCGCCGGAAC
AGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGCCTTTCAAC
AGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGCCACATGGC
CGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCATTCTT
TCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATGTGGAG
CTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTCAAGGG
CCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGGGCGTA
TCGTTACTTGTTCTCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011188CBS51388_011188Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011188-T1CBS51388_011188-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011188-T1.cdsCBS51388_011188-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011188-T1.exon4CBS51388_011188-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_011188-T1.exon3CBS51388_011188-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011188-T1.exon2CBS51388_011188-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011188-T1.exon1CBS51388_011188-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262VPD
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR017383
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1492042..1493321 -
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