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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1493692..1494399+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011189-T1 ID=CBS51388_011189-T1|Name=CBS51388_011189-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=708bp|location=Sequence derived from alignment at An18:1493692..1494399+ (Aspergillus niger CBS 513.88)
ATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGGTCAAGGTAAACCCGC
TTCTGCTACCGGACTCCCTAACCAAACGTTAGTCTTGAATACTGCTTCCC
AATTCAAAGTGGGCATCATGGCTGACCCCAATTGCAGTTTGTATTGTACC
AACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATAT
GCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTTGCCATGAAGACCC
AAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGC
ACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAAT
GGTATGTTTTTGCATAGTGCAGTGCGGTTGTTCCTCGCTCATTGACTCGG
GAATATAGAAAATCGTGTATGCTAAGGGTCCCTCGGACGTCATTGCCCGG
CTGCGCGGAACGTATAATGTGCCCACTACAACATCTGCCAGTCAAGCCAC
GGGAGCATCCACAGAGCTCCAAAAATCGATATTTAGCGGGCCCCCAGGAT
CGGCGGCTTTGCCGTCGAAGCCCAGCGGAGAAGTTAATGGAGAACCCCAA
GCAGGCCAAGGTGTCAAGCGGCCTCGTGAAGATGAAAGCGACGAAGAGGA
AGCCCCTATGGACGAGGACAGTGATGTGCCAATGGAAGCTTCATCGGATG
AAGATTAA back to topCoding sequence (CDS) from alignment at An18:1493692..1494399+ >CBS51388_011189-T1 ID=CBS51388_011189-T1|Name=CBS51388_011189-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1773bp|location=Sequence derived from alignment at An18:1493692..1494399+ (Aspergillus niger CBS 513.88)
ATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGGTCAAGGTAAACCCGC
TTCTGCTACCGGACTCCCTAACCAAACTTTGTATTGTACCAACCTCCCAG
ACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATATGCTTTTTTCA
ACCTACGGCACCGTTCTTGATGTTGTTGCCATGAAGACCCAAAAGATGCG
TGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGCACACAGGCTA
TGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAATGAAAATCGTG
TATGCTAAGGGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAA
TGTGCCCACTACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGC
TCCAAAAATCGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCG
AAGCCCAGCGGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAA
GCGGCCTCGTGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGG
ACAGTGATGTGCCAATGGAAGCTTCATCGGATGAAGATTAAATGGCAACC
AGAGTTCTTCCAGCGCGCGGTGGTGGTCAAGGTAAACCCGCTTCTGCTAC
CGGACTCCCTAACCAAACTTTGTATTGTACCAACCTCCCAGACAAGCTGC
GCAAGCATGACCTACGGCTATCCCTCTATATGCTTTTTTCAACCTACGGC
ACCGTTCTTGATGTTGTTGCCATGAAGACCCAAAAGATGCGTGGTCAGGC
CCATATTGTTTTTAAGGATGTTCAAGCTAGCACACAGGCTATGCGGGCTC
TTCAGGGGTTTGAGTTTTTCGGCAAACAAATGAAAATCGTGTATGCTAAG
GGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAATGTGCCCAC
TACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGCTCCAAAAAT
CGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCGAAGCCCAGC
GGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAAGCGGCCTCG
TGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGGACAGTGATG
TGCCAATGGAAGCTTCATCGGATGAAGATTAAATGGCAACCAGAGTTCTT
CCAGCGCGCGGTGGTGGTCAAGGTAAACCCGCTTCTGCTACCGGACTCCC
TAACCAAACTTTGTATTGTACCAACCTCCCAGACAAGCTGCGCAAGCATG
ACCTACGGCTATCCCTCTATATGCTTTTTTCAACCTACGGCACCGTTCTT
GATGTTGTTGCCATGAAGACCCAAAAGATGCGTGGTCAGGCCCATATTGT
TTTTAAGGATGTTCAAGCTAGCACACAGGCTATGCGGGCTCTTCAGGGGT
TTGAGTTTTTCGGCAAACAAATGAAAATCGTGTATGCTAAGGGTCCCTCG
GACGTCATTGCCCGGCTGCGCGGAACGTATAATGTGCCCACTACAACATC
TGCCAGTCAAGCCACGGGAGCATCCACAGAGCTCCAAAAATCGATATTTA
GCGGGCCCCCAGGATCGGCGGCTTTGCCGTCGAAGCCCAGCGGAGAAGTT
AATGGAGAACCCCAAGCAGGCCAAGGTGTCAAGCGGCCTCGTGAAGATGA
AAGCGACGAAGAGGAAGCCCCTATGGACGAGGACAGTGATGTGCCAATGG
AAGCTTCATCGGATGAAGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1493692..1494399 + |
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