|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1507665..1508489- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011195-T1 ID=CBS51388_011195-T1|Name=CBS51388_011195-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=825bp|location=Sequence derived from alignment at An18:1507665..1508489- (Aspergillus niger CBS 513.88)
ATGCTCGGCCTAGGGGCGTATGAAAGCAGCAGTGATGAAGAAGTGGGAAA
TAATTTGCCCTCAGTACCATCGAAGGTAAAAGGAGCATTATGCTGTGATA
CCGGCCTCTACTAACATGAAACCGGCAGAAGATCGCTAGCCAGCAAGCAC
AGCCGCAGGAAGTGACTAAAGCTACAGGTGATTGGAGATATAATCTACTT
TTTTCTGAAACTAGTGGGACGTATTTAACGTGTTACCAAAGCAGAAATCC
CCAACGAAGCCACACCATCGAAAGAGATACCTGCTCCAGACACAGACAGG
CCTGTTCTTGGACCGACGCATGAAGGCTCACAAGATCCACAACAGCAACC
AGCCGAAAATCCACAAGTCTTCTTAGCAGACCGAGCATTGATCCATGACC
TAACACTTCCTCCGTTACCAAATCTAGACATACCACCATCTCCCCCTGGC
TCTCCTAACCCTGCAGCGAATGCCAAAATCGCACACTTCTTGACCTTGAA
GAAACAGGGCATGCATTTCAACGAAAAGTTAGCCGGGTCTACATCCCTCA
AGAACCCAAGTTTACTGAAGAAAATGATGGATCATGCCGGAATTGATGAT
CAAGCGCAGTATCACACATCATTACCACCTGAAGTATGGAGTATCAACGA
TCTGCCAAGTTGGGGGTATAAAGAGGAACTTTTGAAAGCGCAGAGGGAAA
TTCAGATTGGGGCTGAAGAAAGGAAGTCCGCAGGACAAAGGGATGCTATC
AATTTTGTGGCTGCCACGCCTAGCGAGTCCTCCCGTACAGGCCCTATTTC
TAGCTCAAGGACAAAACAAAGGTAA back to topCoding sequence (CDS) from alignment at An18:1507665..1508489- >CBS51388_011195-T1 ID=CBS51388_011195-T1|Name=CBS51388_011195-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2115bp|location=Sequence derived from alignment at An18:1507665..1508489- (Aspergillus niger CBS 513.88)
AAATCCCCAACGAAGCCACACCATCGAAAGAGATACCTGCTCCAGACACA
GACAGGCCTGTTCTTGGACCGACGCATGAAGGCTCACAAGATCCACAACA
GCAACCAGCCGAAAATCCACAAGTCTTCTTAGCAGACCGAGCATTGATCC
ATGACCTAACACTTCCTCCGTTACCAAATCTAGACATACCACCATCTCCC
CCTGGCTCTCCTAACCCTGCAGCGAATGCCAAAATCGCACACTTCTTGAC
CTTGAAGAAACAGGGCATGCATTTCAACGAAAAGTTAGCCGGGTCTACAT
CCCTCAAGAACCCAAGTTTACTGAAGAAAATGATGGATCATGCCGGAATT
GATGATCAAGCGCAGTATCACACATCATTACCACCTGAAGTATGGAGTAT
CAACGATCTGCCAAGTTGGGGGTATAAAGAGGAACTTTTGAAAGCGCAGA
GGGAAATTCAGATTGGGGCTGAAGAAAGGAAGTCCGCAGGACAAAGGGAT
GCTATCAATTTTGTGGCTGCCACGCCTAGCGAGTCCTCCCGTACAGGCCC
TATTTCTAGCTCAAGGACAAAACAAAGGTAAAAGATCGCTAGCCAGCAAG
CACAGCCGCAGGAAGTGACTAAAGCTACAGATGCTCGGCCTAGGGGCGTA
TGAAAGCAGCAGTGATGAAGAAGTGGGAAATAATTTGCCCTCAGTACCAT
CGAAGAAATCCCCAACGAAGCCACACCATCGAAAGAGATACCTGCTCCAG
ACACAGACAGGCCTGTTCTTGGACCGACGCATGAAGGCTCACAAGATCCA
CAACAGCAACCAGCCGAAAATCCACAAGTCTTCTTAGCAGACCGAGCATT
GATCCATGACCTAACACTTCCTCCGTTACCAAATCTAGACATACCACCAT
CTCCCCCTGGCTCTCCTAACCCTGCAGCGAATGCCAAAATCGCACACTTC
TTGACCTTGAAGAAACAGGGCATGCATTTCAACGAAAAGTTAGCCGGGTC
TACATCCCTCAAGAACCCAAGTTTACTGAAGAAAATGATGGATCATGCCG
GAATTGATGATCAAGCGCAGTATCACACATCATTACCACCTGAAGTATGG
AGTATCAACGATCTGCCAAGTTGGGGGTATAAAGAGGAACTTTTGAAAGC
GCAGAGGGAAATTCAGATTGGGGCTGAAGAAAGGAAGTCCGCAGGACAAA
GGGATGCTATCAATTTTGTGGCTGCCACGCCTAGCGAGTCCTCCCGTACA
GGCCCTATTTCTAGCTCAAGGACAAAACAAAGGTAAAAGATCGCTAGCCA
GCAAGCACAGCCGCAGGAAGTGACTAAAGCTACAGATGCTCGGCCTAGGG
GCGTATGAAAGCAGCAGTGATGAAGAAGTGGGAAATAATTTGCCCTCAGT
ACCATCGAAGAAATCCCCAACGAAGCCACACCATCGAAAGAGATACCTGC
TCCAGACACAGACAGGCCTGTTCTTGGACCGACGCATGAAGGCTCACAAG
ATCCACAACAGCAACCAGCCGAAAATCCACAAGTCTTCTTAGCAGACCGA
GCATTGATCCATGACCTAACACTTCCTCCGTTACCAAATCTAGACATACC
ACCATCTCCCCCTGGCTCTCCTAACCCTGCAGCGAATGCCAAAATCGCAC
ACTTCTTGACCTTGAAGAAACAGGGCATGCATTTCAACGAAAAGTTAGCC
GGGTCTACATCCCTCAAGAACCCAAGTTTACTGAAGAAAATGATGGATCA
TGCCGGAATTGATGATCAAGCGCAGTATCACACATCATTACCACCTGAAG
TATGGAGTATCAACGATCTGCCAAGTTGGGGGTATAAAGAGGAACTTTTG
AAAGCGCAGAGGGAAATTCAGATTGGGGCTGAAGAAAGGAAGTCCGCAGG
ACAAAGGGATGCTATCAATTTTGTGGCTGCCACGCCTAGCGAGTCCTCCC
GTACAGGCCCTATTTCTAGCTCAAGGACAAAACAAAGGTAAAAGATCGCT
AGCCAGCAAGCACAGCCGCAGGAAGTGACTAAAGCTACAGATGCTCGGCC
TAGGGGCGTATGAAAGCAGCAGTGATGAAGAAGTGGGAAATAATTTGCCC
TCAGTACCATCGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012479 |
| DBxref | PFAM:PF07818 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1507665..1508489 - |
|
