You are here

Home

CBS51388_011232-T1, CBS51388_011232-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011232-T1
Unique NameCBS51388_011232-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An19:73214..74547+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011232-T1 ID=CBS51388_011232-T1|Name=CBS51388_011232-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1334bp|location=Sequence derived from alignment at An19:73214..74547+ (Aspergillus niger CBS 513.88)
ATGTCTCTGCCAGAGTTGAACGACTCCCCCTTGCCGAAAGACTCCCACCA
GTACGATCCGGTCATGCAATCGGAGCCGGAGCCGGACTCGCCCGCCGTTT
CCTCCTCCCCCAACCGCCCTCGTACCCTCCGGCAAAGGATATCTGCCGCC
GTCGCCAAGTCTGGCTCCAAACCGCTGCTATGCTTTCTACCTCTAGGCCT
TGTGGCGGACGTGCTGCATTGGAACCCCGTGTTGGTGTCCATCTACAATT
TCCTCGCCGTCATTCCCCTCTCCGTTGTGGTTTCAGACTGCTCCGATGAG
TTGTCCGACTCCCTCGGGCAGCTCATGGGCGGCTTGATCAATGCTACCTT
TGGCAACTGTGTCGAGCTGTCGGTGAGTCCCATATCCTCTGCTGAACATC
AAGCGTCGGTTTTAATCTCATGGCTGTAACTCTCCCAGACCGGCATCTTG
GCCCTCACGCGTGGCGAAATATATTTTGCGCAATCTGTCATGATTGGGAG
CATTCTGTCCGATCTACTGCTTATCCTCGGTTGCTGTCTCGTCGCCGCCT
CGTACAATACCTACATCCTCCATTTCAATAAACCCGTCACCGGCGCGCTC
GCTTCGTTGATGGTGGTCACCTCAGTCGGACTGATTCTGCCCTCCGTCCT
TTATTCCACCTTTCCTTTCGACCTTGGGGACCAGATCGTAGCGTTTTCCC
GCGGCACCTCTGCCGTTCTACTTGCGCTATATGGTGGATATCTTTATTTT
CAGCTGGGGACCCATAGCCACCTCTTTCTCCAAGGGGAGACTGAGAGCAA
CTCATCGCGGGAGTCACAGCGCAGCATGGAATGGCTCACAACCACTCTGA
TCCTATCCGCGTTAGCCATAGTTGTCTCCACGAAGAACATCATGGACAGC
ATCCCCGCAACTGCTGCAACCCTAAACATTTCGAAGACGTTCATTGCGAC
CATTCTCATCCCCATAATCAGCAACAGTTGTGAAGGGGCAGTGGTCATCA
CTGCCTGTGGTGGTGGCGGCGATGTGAACTTCGCCATCAGTATGATCGTC
AGCAGTATCCTGCAGATCGGATTGTTTGCCATCCCTTTCCTGGTCATGCT
GGGTTGGGTTATGGGTACGCCGATGACCCTGTATTTCGAAACCTTCCACA
CCGTGGTTCTATTCTTCTCCGTGCTGCTGGTCAATTGCATCCTGCAGGAT
GGGAAATATACCTATATTCACGGAAGTATGCTGGTTGCCATGTAAGTCAT
CTCCCTGGGACTCTTAATTGGTTTACATCTACTGACTGTGAGGACAGGTA
TGCGATTTTGACGCTTGCTTTTTACGTTCGGTAG
back to top

Coding sequence (CDS) from alignment at An19:73214..74547+

>CBS51388_011232-T1 ID=CBS51388_011232-T1|Name=CBS51388_011232-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3636bp|location=Sequence derived from alignment at An19:73214..74547+ (Aspergillus niger CBS 513.88)
ATGTCTCTGCCAGAGTTGAACGACTCCCCCTTGCCGAAAGACTCCCACCA
GTACGATCCGGTCATGCAATCGGAGCCGGAGCCGGACTCGCCCGCCGTTT
CCTCCTCCCCCAACCGCCCTCGTACCCTCCGGCAAAGGATATCTGCCGCC
GTCGCCAAGTCTGGCTCCAAACCGCTGCTATGCTTTCTACCTCTAGGCCT
TGTGGCGGACGTGCTGCATTGGAACCCCGTGTTGGTGTCCATCTACAATT
TCCTCGCCGTCATTCCCCTCTCCGTTGTGGTTTCAGACTGCTCCGATGAG
TTGTCCGACTCCCTCGGGCAGCTCATGGGCGGCTTGATCAATGCTACCTT
TGGCAACTGTGTCGAGCTGTCGACCGGCATCTTGGCCCTCACGCGTGGCG
AAATATATTTTGCGCAATCTGTCATGATTGGGAGCATTCTGTCCGATCTA
CTGCTTATCCTCGGTTGCTGTCTCGTCGCCGCCTCGTACAATACCTACAT
CCTCCATTTCAATAAACCCGTCACCGGCGCGCTCGCTTCGTTGATGGTGG
TCACCTCAGTCGGACTGATTCTGCCCTCCGTCCTTTATTCCACCTTTCCT
TTCGACCTTGGGGACCAGATCGTAGCGTTTTCCCGCGGCACCTCTGCCGT
TCTACTTGCGCTATATGGTGGATATCTTTATTTTCAGCTGGGGACCCATA
GCCACCTCTTTCTCCAAGGGGAGACTGAGAGCAACTCATCGCGGGAGTCA
CAGCGCAGCATGGAATGGCTCACAACCACTCTGATCCTATCCGCGTTAGC
CATAGTTGTCTCCACGAAGAACATCATGGACAGCATCCCCGCAACTGCTG
CAACCCTAAACATTTCGAAGACGTTCATTGCGACCATTCTCATCCCCATA
ATCAGCAACAGTTGTGAAGGGGCAGTGGTCATCACTGCCTGTGGTGGTGG
CGGCGATGTGAACTTCGCCATCAGTATGATCGTCAGCAGTATCCTGCAGA
TCGGATTGTTTGCCATCCCTTTCCTGGTCATGCTGGGTTGGGTTATGGGT
ACGCCGATGACCCTGTATTTCGAAACCTTCCACACCGTGGTTCTATTCTT
CTCCGTGCTGCTGGTCAATTGCATCCTGCAGGATGGGAAATATACCTATA
TTCACGGAAGTATGCTGGTTGCCATGTATGCGATTTTGACGCTTGCTTTT
TACGTTCGGTAGATGTCTCTGCCAGAGTTGAACGACTCCCCCTTGCCGAA
AGACTCCCACCAGTACGATCCGGTCATGCAATCGGAGCCGGAGCCGGACT
CGCCCGCCGTTTCCTCCTCCCCCAACCGCCCTCGTACCCTCCGGCAAAGG
ATATCTGCCGCCGTCGCCAAGTCTGGCTCCAAACCGCTGCTATGCTTTCT
ACCTCTAGGCCTTGTGGCGGACGTGCTGCATTGGAACCCCGTGTTGGTGT
CCATCTACAATTTCCTCGCCGTCATTCCCCTCTCCGTTGTGGTTTCAGAC
TGCTCCGATGAGTTGTCCGACTCCCTCGGGCAGCTCATGGGCGGCTTGAT
CAATGCTACCTTTGGCAACTGTGTCGAGCTGTCGACCGGCATCTTGGCCC
TCACGCGTGGCGAAATATATTTTGCGCAATCTGTCATGATTGGGAGCATT
CTGTCCGATCTACTGCTTATCCTCGGTTGCTGTCTCGTCGCCGCCTCGTA
CAATACCTACATCCTCCATTTCAATAAACCCGTCACCGGCGCGCTCGCTT
CGTTGATGGTGGTCACCTCAGTCGGACTGATTCTGCCCTCCGTCCTTTAT
TCCACCTTTCCTTTCGACCTTGGGGACCAGATCGTAGCGTTTTCCCGCGG
CACCTCTGCCGTTCTACTTGCGCTATATGGTGGATATCTTTATTTTCAGC
TGGGGACCCATAGCCACCTCTTTCTCCAAGGGGAGACTGAGAGCAACTCA
TCGCGGGAGTCACAGCGCAGCATGGAATGGCTCACAACCACTCTGATCCT
ATCCGCGTTAGCCATAGTTGTCTCCACGAAGAACATCATGGACAGCATCC
CCGCAACTGCTGCAACCCTAAACATTTCGAAGACGTTCATTGCGACCATT
CTCATCCCCATAATCAGCAACAGTTGTGAAGGGGCAGTGGTCATCACTGC
CTGTGGTGGTGGCGGCGATGTGAACTTCGCCATCAGTATGATCGTCAGCA
GTATCCTGCAGATCGGATTGTTTGCCATCCCTTTCCTGGTCATGCTGGGT
TGGGTTATGGGTACGCCGATGACCCTGTATTTCGAAACCTTCCACACCGT
GGTTCTATTCTTCTCCGTGCTGCTGGTCAATTGCATCCTGCAGGATGGGA
AATATACCTATATTCACGGAAGTATGCTGGTTGCCATGTATGCGATTTTG
ACGCTTGCTTTTTACGTTCGGTAGATGTCTCTGCCAGAGTTGAACGACTC
CCCCTTGCCGAAAGACTCCCACCAGTACGATCCGGTCATGCAATCGGAGC
CGGAGCCGGACTCGCCCGCCGTTTCCTCCTCCCCCAACCGCCCTCGTACC
CTCCGGCAAAGGATATCTGCCGCCGTCGCCAAGTCTGGCTCCAAACCGCT
GCTATGCTTTCTACCTCTAGGCCTTGTGGCGGACGTGCTGCATTGGAACC
CCGTGTTGGTGTCCATCTACAATTTCCTCGCCGTCATTCCCCTCTCCGTT
GTGGTTTCAGACTGCTCCGATGAGTTGTCCGACTCCCTCGGGCAGCTCAT
GGGCGGCTTGATCAATGCTACCTTTGGCAACTGTGTCGAGCTGTCGACCG
GCATCTTGGCCCTCACGCGTGGCGAAATATATTTTGCGCAATCTGTCATG
ATTGGGAGCATTCTGTCCGATCTACTGCTTATCCTCGGTTGCTGTCTCGT
CGCCGCCTCGTACAATACCTACATCCTCCATTTCAATAAACCCGTCACCG
GCGCGCTCGCTTCGTTGATGGTGGTCACCTCAGTCGGACTGATTCTGCCC
TCCGTCCTTTATTCCACCTTTCCTTTCGACCTTGGGGACCAGATCGTAGC
GTTTTCCCGCGGCACCTCTGCCGTTCTACTTGCGCTATATGGTGGATATC
TTTATTTTCAGCTGGGGACCCATAGCCACCTCTTTCTCCAAGGGGAGACT
GAGAGCAACTCATCGCGGGAGTCACAGCGCAGCATGGAATGGCTCACAAC
CACTCTGATCCTATCCGCGTTAGCCATAGTTGTCTCCACGAAGAACATCA
TGGACAGCATCCCCGCAACTGCTGCAACCCTAAACATTTCGAAGACGTTC
ATTGCGACCATTCTCATCCCCATAATCAGCAACAGTTGTGAAGGGGCAGT
GGTCATCACTGCCTGTGGTGGTGGCGGCGATGTGAACTTCGCCATCAGTA
TGATCGTCAGCAGTATCCTGCAGATCGGATTGTTTGCCATCCCTTTCCTG
GTCATGCTGGGTTGGGTTATGGGTACGCCGATGACCCTGTATTTCGAAAC
CTTCCACACCGTGGTTCTATTCTTCTCCGTGCTGCTGGTCAATTGCATCC
TGCAGGATGGGAAATATACCTATATTCACGGAAGTATGCTGGTTGCCATG
TATGCGATTTTGACGCTTGCTTTTTACGTTCGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015369calcium:proton antiporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006816calcium ion transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011232CBS51388_011232Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011232-T1.exon1CBS51388_011232-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011232-T1.exon2CBS51388_011232-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011232-T1.exon3CBS51388_011232-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011232-T1.cdsCBS51388_011232-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011232-T1CBS51388_011232-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004837
DBxrefInterPro:IPR004798
DBxrefPFAM:PF01699
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An19supercontigAn19:73214..74547 +
Powered by Drupal