You are here

Home

CAN33_0230-T1, CAN33_0230-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0230-T1
Unique NameCAN33_0230-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:97631..98551+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0230-T1 ID=CAN33_0230-T1|Name=CAN33_0230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=921bp|location=Sequence derived from alignment at NKJJ01000004.1:97631..98551+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGGCTTCGAATT
GGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTACCATCATTG
CCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCAGACCGGCAT
CCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCCCGAGTCCAT
CCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACAAGGGACTTG
ATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAGATTAAGGAC
ATGTTCGTTTCAATCCATGGATGACTTAAAACTGCTGATGGAAGCTAACG
TCCACCAGGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGGTCC
ACATATCATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTATGA
AGAAGATCGTCAACATGTAATGCCTCTTGACCCGAAACCGACCGTGTTGA
AGCCTGACTCGCATCCTCCAGTTCCAGCAGCGTCGGCTCCATTGCAAAGC
AGTCCGTTTACCGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCC
GCCTTGAATATGATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGG
GTTCACCGTATTCTGCGTGAGTCCGGGGGTGAGTGCCAATTTAGACCTCA
AGCCAATCCCGACATATTTCTGATCTCAACGTTAGTGGTTGAAGACAGAC
GAAGCCAATGCTCATGCCGATCTTCCGGTCGGAACTGGAGTCGAGCGCGT
TTTGGAGATGATCCGTGATAGGGGGGTGGAAGTCAATGGAAGATTTTTAA
ATATTCATGTTCCTGGGTGGGAGAATAACCCTGGTTTAAACCAGTATGAT
GGAAAGGAGCTGCCATGGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:97631..98551+

>CAN33_0230-T1 ID=CAN33_0230-T1|Name=CAN33_0230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3012bp|location=Sequence derived from alignment at NKJJ01000004.1:97631..98551+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGGCTTCGAATT
GGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTACCATCATTG
CCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCAGACCGGCAT
CCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCCCGAGTCCAT
CCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACAAGGGACTTG
ATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAGATTAAGGAC
ATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGGTCCACATAT
CATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTATGAAGAAGA
TCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAGTCCGTTTAC
CGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGCCTTGAATAT
GATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGTTCACCGTAT
TCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAATGCTCATGCC
GATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGATGATCCGTGA
TAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATGTTCCTGGGT
GGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAGCTGCCATGG
TAGATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGGCTTCGA
ATTGGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTACCATCA
TTGCCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCAGACCGG
CATCCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCCCGAGTC
CATCCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACAAGGGAC
TTGATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAGATTAAG
GACATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGGTCCACA
TATCATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTATGAAGA
AGATCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAGTCCGTT
TACCGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGCCTTGAA
TATGATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGTTCACCG
TATTCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAATGCTCAT
GCCGATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGATGATCCG
TGATAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATGTTCCTG
GGTGGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAGCTGCCA
TGGTAGATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGGCTT
CGAATTGGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTACCA
TCATTGCCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCAGAC
CGGCATCCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCCCGA
GTCCATCCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACAAGG
GACTTGATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAGATT
AAGGACATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGGTCC
ACATATCATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTATGA
AGAAGATCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAGTCC
GTTTACCGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGCCTT
GAATATGATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGTTCA
CCGTATTCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAATGCT
CATGCCGATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGATGAT
CCGTGATAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATGTTC
CTGGGTGGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAGCTG
CCATGGTAGATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGG
CTTCGAATTGGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTA
CCATCATTGCCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCA
GACCGGCATCCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCC
CGAGTCCATCCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACA
AGGGACTTGATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAG
ATTAAGGACATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGG
TCCACATATCATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTA
TGAAGAAGATCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAG
TCCGTTTACCGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGC
CTTGAATATGATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGT
TCACCGTATTCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAAT
GCTCATGCCGATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGAT
GATCCGTGATAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATG
TTCCTGGGTGGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAG
CTGCCATGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0230CAN33_0230Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0230-T1.exon1CAN33_0230-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_0230-T1.exon2CAN33_0230-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0230-T1.exon3CAN33_0230-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0230-T1.exon4CAN33_0230-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0230-T1.cdsCAN33_0230-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0230-T1CAN33_0230-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:97631..98551 +
Powered by Drupal