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CAN33_0405-T1, CAN33_0405-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0405-T1
Unique NameCAN33_0405-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:185623..186646-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0405-T1 ID=CAN33_0405-T1|Name=CAN33_0405-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1024bp|location=Sequence derived from alignment at NKJJ01000004.1:185623..186646- (Aspergillus niger FDAARGOS_311)
ATGGCCTCCCAAAATGACTCCAGTGTATCCTTCGTTCTCTATCGATACAC
CCCGTCAATCCCAGCGGCGGCCATATTCACTGCTGTGTTCATCATCCTGG
CCATAGTCCACACCTATCTTGCTATAAGACATCGATCAAAATATTTCATT
CCTTTCATCATTGGTCTACTCTGTAAGTACATCTTCCAGCATATGCAACC
CTCACCGAACTAACATATCACGGTCTGAATAGTCGAAGCAGCCGGCTACA
TCGCCCGAATCTTCTCCCACTATGACACCCTCGCTCTCGGCCCCTACATC
ATCCAGACCATGCTCATCCTCGTCGCGCCTCCCCTCTTCGCCGCTTCAAT
CTACATGACCTTAGGCAGACTGATTCTCTATCTCGACGCCGAGTCCGCCT
CTCTCCTTCGAGTAAAATACATTGCTAAGATATTCGTCGTCGGGGATATC
ATCTCCTTCCTGTTGCAATGTGGAGGTAAATATACCCTACTACGCCATCA
AAGTCCTCTCGAGAACCCGCCACTAACATATTGCAGGCGGTGGCTACATG
TCAGCCGGAAGCCTCTCCGCAATGGAAGACGGCGCCCACATTGTAATCGC
CGGTTTAGCCGTCCAGCTTCTCTTCTTCGGATTTTTCATCATCGCCAGCG
CTATCTTCCACTACCGAGTGAAGACGAATTCGCAATACTACACTACTAGA
CAGGTGATATCATCCTCCTCCCGTCGTCGCGACTCGTGGGAATGCATGCT
GTGGTGTATTTATGGGGCGTGTGTGTTGATTCTCATTCGGTCCATTTATC
GTGTCGTTGAGTTCGTGGAGGGGAATGATGGCTTTGTTATGCGCCTGGAG
TACCTGTTGTATATTTTTGATGCTGTGTTGATGGCCTTGCAGGCGATGTT
GTTGTTGGTTGGCTATCCTGGACGGGTGTTGGGAGGGGGCAAACGCAACG
ATGGGGGTGTTCCGTTGGAGGAGAGGGCGGATTCAGCGGAGGGTTTTCTG
GGACGTGGGAAGGGGGCAGTTTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:185623..186646-

>CAN33_0405-T1 ID=CAN33_0405-T1|Name=CAN33_0405-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2709bp|location=Sequence derived from alignment at NKJJ01000004.1:185623..186646- (Aspergillus niger FDAARGOS_311)
GCGGTGGCTACATGTCAGCCGGAAGCCTCTCCGCAATGGAAGACGGCGCC
CACATTGTAATCGCCGGTTTAGCCGTCCAGCTTCTCTTCTTCGGATTTTT
CATCATCGCCAGCGCTATCTTCCACTACCGAGTGAAGACGAATTCGCAAT
ACTACACTACTAGACAGGTGATATCATCCTCCTCCCGTCGTCGCGACTCG
TGGGAATGCATGCTGTGGTGTATTTATGGGGCGTGTGTGTTGATTCTCAT
TCGGTCCATTTATCGTGTCGTTGAGTTCGTGGAGGGGAATGATGGCTTTG
TTATGCGCCTGGAGTACCTGTTGTATATTTTTGATGCTGTGTTGATGGCC
TTGCAGGCGATGTTGTTGTTGGTTGGCTATCCTGGACGGGTGTTGGGAGG
GGGCAAACGCAACGATGGGGGTGTTCCGTTGGAGGAGAGGGCGGATTCAG
CGGAGGGTTTTCTGGGACGTGGGAAGGGGGCAGTTTAGTCGAAGCAGCCG
GCTACATCGCCCGAATCTTCTCCCACTATGACACCCTCGCTCTCGGCCCC
TACATCATCCAGACCATGCTCATCCTCGTCGCGCCTCCCCTCTTCGCCGC
TTCAATCTACATGACCTTAGGCAGACTGATTCTCTATCTCGACGCCGAGT
CCGCCTCTCTCCTTCGAGTAAAATACATTGCTAAGATATTCGTCGTCGGG
GATATCATCTCCTTCCTGTTGCAATGTGGAGATGGCCTCCCAAAATGACT
CCAGTGTATCCTTCGTTCTCTATCGATACACCCCGTCAATCCCAGCGGCG
GCCATATTCACTGCTGTGTTCATCATCCTGGCCATAGTCCACACCTATCT
TGCTATAAGACATCGATCAAAATATTTCATTCCTTTCATCATTGGTCTAC
TCTGCGGTGGCTACATGTCAGCCGGAAGCCTCTCCGCAATGGAAGACGGC
GCCCACATTGTAATCGCCGGTTTAGCCGTCCAGCTTCTCTTCTTCGGATT
TTTCATCATCGCCAGCGCTATCTTCCACTACCGAGTGAAGACGAATTCGC
AATACTACACTACTAGACAGGTGATATCATCCTCCTCCCGTCGTCGCGAC
TCGTGGGAATGCATGCTGTGGTGTATTTATGGGGCGTGTGTGTTGATTCT
CATTCGGTCCATTTATCGTGTCGTTGAGTTCGTGGAGGGGAATGATGGCT
TTGTTATGCGCCTGGAGTACCTGTTGTATATTTTTGATGCTGTGTTGATG
GCCTTGCAGGCGATGTTGTTGTTGGTTGGCTATCCTGGACGGGTGTTGGG
AGGGGGCAAACGCAACGATGGGGGTGTTCCGTTGGAGGAGAGGGCGGATT
CAGCGGAGGGTTTTCTGGGACGTGGGAAGGGGGCAGTTTAGTCGAAGCAG
CCGGCTACATCGCCCGAATCTTCTCCCACTATGACACCCTCGCTCTCGGC
CCCTACATCATCCAGACCATGCTCATCCTCGTCGCGCCTCCCCTCTTCGC
CGCTTCAATCTACATGACCTTAGGCAGACTGATTCTCTATCTCGACGCCG
AGTCCGCCTCTCTCCTTCGAGTAAAATACATTGCTAAGATATTCGTCGTC
GGGGATATCATCTCCTTCCTGTTGCAATGTGGAGATGGCCTCCCAAAATG
ACTCCAGTGTATCCTTCGTTCTCTATCGATACACCCCGTCAATCCCAGCG
GCGGCCATATTCACTGCTGTGTTCATCATCCTGGCCATAGTCCACACCTA
TCTTGCTATAAGACATCGATCAAAATATTTCATTCCTTTCATCATTGGTC
TACTCTGCGGTGGCTACATGTCAGCCGGAAGCCTCTCCGCAATGGAAGAC
GGCGCCCACATTGTAATCGCCGGTTTAGCCGTCCAGCTTCTCTTCTTCGG
ATTTTTCATCATCGCCAGCGCTATCTTCCACTACCGAGTGAAGACGAATT
CGCAATACTACACTACTAGACAGGTGATATCATCCTCCTCCCGTCGTCGC
GACTCGTGGGAATGCATGCTGTGGTGTATTTATGGGGCGTGTGTGTTGAT
TCTCATTCGGTCCATTTATCGTGTCGTTGAGTTCGTGGAGGGGAATGATG
GCTTTGTTATGCGCCTGGAGTACCTGTTGTATATTTTTGATGCTGTGTTG
ATGGCCTTGCAGGCGATGTTGTTGTTGGTTGGCTATCCTGGACGGGTGTT
GGGAGGGGGCAAACGCAACGATGGGGGTGTTCCGTTGGAGGAGAGGGCGG
ATTCAGCGGAGGGTTTTCTGGGACGTGGGAAGGGGGCAGTTTAGTCGAAG
CAGCCGGCTACATCGCCCGAATCTTCTCCCACTATGACACCCTCGCTCTC
GGCCCCTACATCATCCAGACCATGCTCATCCTCGTCGCGCCTCCCCTCTT
CGCCGCTTCAATCTACATGACCTTAGGCAGACTGATTCTCTATCTCGACG
CCGAGTCCGCCTCTCTCCTTCGAGTAAAATACATTGCTAAGATATTCGTC
GTCGGGGATATCATCTCCTTCCTGTTGCAATGTGGAGATGGCCTCCCAAA
ATGACTCCAGTGTATCCTTCGTTCTCTATCGATACACCCCGTCAATCCCA
GCGGCGGCCATATTCACTGCTGTGTTCATCATCCTGGCCATAGTCCACAC
CTATCTTGCTATAAGACATCGATCAAAATATTTCATTCCTTTCATCATTG
GTCTACTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0405CAN33_0405Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0405-T1CAN33_0405-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0405-T1.cdsCAN33_0405-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0405-T1.exon3CAN33_0405-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0405-T1.exon2CAN33_0405-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0405-T1.exon1CAN33_0405-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 like protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:185623..186646 -
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