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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:243453..244402+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_0520-T1 ID=CAN33_0520-T1|Name=CAN33_0520-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=950bp|location=Sequence derived from alignment at NKJJ01000004.1:243453..244402+ (Aspergillus niger FDAARGOS_311)
ATGAATGTGCCTCTCACCACCGCGGAAGTACCGCCCCAATTCCTCAAATC
CGCGTTTCTCGTCGGACATATCCCCCAGCGTACTTTGGCAGCTGAACCGC
GCGTGTCTTACACCCTGTACATTCCTCCCACCCATTACAATCCGGACCCC
AGCCGCGCCTCTCCCAAACCAAGCCCTTACGAAAAAGCCAAGCTTCCACT
GCTGGTGAACATCCATGGCACCAGCCGCAATATTTCGATGCGAACCGAGC
TGGTTTCCTTTGCCGAATCCACGCCCTGTGCTATCCTTGCGCCACTTTTC
CCCGCCAACATCGACGGACCCAATGATCTCGACTCATACAAGGTGCTGCG
CTCAGCGACATTGCGCTCTGATCGTGCGCTTCTGGCAATTCTAGATGAAG
TATCTACAGTCTGGCCTGGAATCGACACCGAGAAGGTTTTCTTGGCGGGG
TTTTCCGGGGGAGGGCAATTTGCGCATCGGTTTCTCTACGTGCACCCGGA
GCGATTAGCAGCCGTGAGTGTCGGTGCGCCGGGAAAGGTTACGATGCTTG
ATGAGCAACTGGCCTGGCCGAGCGGGATAGCTAATGTTCAGGAGATATTC
GGCAAGGGAGTGAACAAGGAACTTGTCAGAAAGGTGCAAATCCAGCTAGT
CATTGGAAGTGAAGATGTGAAGGTCCATGGGGGCGGGAGTTCTGGGAGTG
GGCAAAGAAAATGATGGCGCAACGGATGGCTGCGGAAAAGACTTCTGGGC
AGGACAGCGGGACGGTGAATACGGGAAAGCGAGAGGTGGTGATGATGGAT
CAGGGACGATCGCAGACGCTCCAGCAATTGCAGAGCAGTTGGCAGGCAGA
TGGCATTGAGGCTCGGCTGGACGTGGTGGATGGAGTGGCGCACAACTCGT
TGGGAGTGCAGGAATGTGTCTTGGGTTACCTGCGGCCGTTGATGCAATGA
back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:243453..244402+ >CAN33_0520-T1 ID=CAN33_0520-T1|Name=CAN33_0520-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1740bp|location=Sequence derived from alignment at NKJJ01000004.1:243453..244402+ (Aspergillus niger FDAARGOS_311)
ATGAATGTGCCTCTCACCACCGCGGAAGTACCGCCCCAATTCCTCAAATC
CGCGTTTCTCGTCGGACATATCCCCCAGCGTACTTTGGCAGCTGAACCGC
GCGTGTCTTACACCCTGTACATTCCTCCCACCCATTACAATCCGGACCCC
AGCCGCGCCTCTCCCAAACCAAGCCCTTACGAAAAAGCCAAGCTTCCACT
GCTGGTGAACATCCATGGCACCAGCCGCAATATTTCGATGCGAACCGAGC
TGGTTTCCTTTGCCGAATCCACGCCCTGTGCTATCCTTGCGCCACTTTTC
CCCGCCAACATCGACGGACCCAATGATCTCGACTCATACAAGGTGCTGCG
CTCAGCGACATTGCGCTCTGATCGTGCGCTTCTGGCAATTCTAGATGAAG
TATCTACAGTCTGGCCTGGAATCGACACCGAGAAGGTTTTCTTGGCGGGG
TTTTCCGGGGGAGGGCAATTTGCGCATCGGTTTCTCTACGTGCACCCGGA
GCGATTAGCAGCCGTGAGTGTCGGTGCGCCGGGAAAGGTTACGATGCTTG
ATGAGCAACTGGCCTGGCCGAGCGGGATAGCTAATGTTCAGGAGATATTC
GGCAAGGGAGTGAACAAGGAACTTGTCAGAAAGGTGCAAATCCAGCTAGT
CATTGGAAGTGAAGATGTGAAGGACAGCGGGACGGTGAATACGGGAAAGC
GAGAGGTGGTGATGATGGATCAGGGACGATCGCAGACGCTCCAGCAATTG
CAGAGCAGTTGGCAGGCAGATGGCATTGAGGCTCGGCTGGACGTGGTGGA
TGGAGTGGCGCACAACTCGTTGGGAGTGCAGGAATGTGTCTTGGGTTACC
TGCGGCCGTTGATGCAATGAATGAATGTGCCTCTCACCACCGCGGAAGTA
CCGCCCCAATTCCTCAAATCCGCGTTTCTCGTCGGACATATCCCCCAGCG
TACTTTGGCAGCTGAACCGCGCGTGTCTTACACCCTGTACATTCCTCCCA
CCCATTACAATCCGGACCCCAGCCGCGCCTCTCCCAAACCAAGCCCTTAC
GAAAAAGCCAAGCTTCCACTGCTGGTGAACATCCATGGCACCAGCCGCAA
TATTTCGATGCGAACCGAGCTGGTTTCCTTTGCCGAATCCACGCCCTGTG
CTATCCTTGCGCCACTTTTCCCCGCCAACATCGACGGACCCAATGATCTC
GACTCATACAAGGTGCTGCGCTCAGCGACATTGCGCTCTGATCGTGCGCT
TCTGGCAATTCTAGATGAAGTATCTACAGTCTGGCCTGGAATCGACACCG
AGAAGGTTTTCTTGGCGGGGTTTTCCGGGGGAGGGCAATTTGCGCATCGG
TTTCTCTACGTGCACCCGGAGCGATTAGCAGCCGTGAGTGTCGGTGCGCC
GGGAAAGGTTACGATGCTTGATGAGCAACTGGCCTGGCCGAGCGGGATAG
CTAATGTTCAGGAGATATTCGGCAAGGGAGTGAACAAGGAACTTGTCAGA
AAGGTGCAAATCCAGCTAGTCATTGGAAGTGAAGATGTGAAGGACAGCGG
GACGGTGAATACGGGAAAGCGAGAGGTGGTGATGATGGATCAGGGACGAT
CGCAGACGCTCCAGCAATTGCAGAGCAGTTGGCAGGCAGATGGCATTGAG
GCTCGGCTGGACGTGGTGGATGGAGTGGCGCACAACTCGTTGGGAGTGCA
GGAATGTGTCTTGGGTTACCTGCGGCCGTTGATGCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR010126 |
| DBxref | PFAM:PF10503 |
| Product | Esterase PHB depolymerase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:243453..244402 + |
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