|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:531909..532916+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10230-T1 ID=CAN33_10230-T1|Name=CAN33_10230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1008bp|location=Sequence derived from alignment at NKJJ01000006.1:531909..532916+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACATTCGCGATCTCAATCAACTCCCTCCCTACTGGGAAGTCGT
CGCCAGCATGGAAGAACCAAGCTTTGCTCACCCCTTTTTCGCTGGTCTCA
ACCACAACCACATGCCCCATGGCGAACACTTTGCCGGTGCTGGAGACTTC
GATCTGCCCCATCGCGGCCGCCATGGCCCTCACCACCGCCGCCACCGCCG
CGGAGAGCCTGTGACTGAAGACGAAGAGCCTACCCAGACCGAGACCGCCG
AAGATGATGAATCCTCCTCTTCTTCTTCCGATGAGGAAGACCGTGATGAA
TCCAAGAAATGCAAGCGTCACGGTCGGCACGGCGGCTTCCACGCCAAGGG
TGGAAAGGGCCGTCATGGGCCCGGTCGCCATGGGCGCGGTCCATGGGGGA
AATTCGACCACCCCCCTCATCCTGGAGCATTTGGCGCTTGGGGAGCTGAC
TTTCAAGGACCTCACGGTGGATTTGGACCACATGGCGGATTCGGCCATGG
ACCGCATGGTCGGTTCGGGCCTTACGGGGGTCGACACATGCGCGGTGGCT
TCAAACACGGTGGTCGGGGCGGACCGCACCGTGGCTTTGGCCCTTTTGGA
TTCAAGGAGTTCGGCCACCATCATCACCACCGCAAGCACCACAAGCGCGG
TGACTTTTTCCACCCCGAGGTGGATGTGTTCGACACCACGGAGGCCTTTA
TCGTGCATGTTTCGCTGCCTGGAGCGAAGAAGGAAGCGGTGGAAGTGAAG
TGGGATCCGAAGAAGTTCGAGTTGAATGTCAGCGGGACGATTGAGCGTCC
TGGCGATGAGGAATTGCTGAAGACGTTGGCATTGGATGAGCGTTGCGTGG
GGACTTTTGACCGCCAGGTGCGACTGGGAAGTGTGTTCCAGCCCGTGGAA
ATTCATGTTGAGGGCATCACGGCGGAGATGGAGAACGGGGTGTTGAGCAT
CAAGTTGCCGAAGGTGGAGACGGATGTTGTGATGGTGACCCGCGTGGATG
TACAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:531909..532916+ >CAN33_10230-T1 ID=CAN33_10230-T1|Name=CAN33_10230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1878bp|location=Sequence derived from alignment at NKJJ01000006.1:531909..532916+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACATTCGCGATCTCAATCAACTCCCTCCCTACTGGGAAGTCGT
CGCCAGCATGGAAGAACCAAGCTTTGCTCACCCCTTTTTCGCTGGTCTCA
ACCACAACCACATGCCCCATGGCGAACACTTTGCCGAGCCTGTGACTGAA
GACGAAGAGCCTACCCAGACCGAGACCGCCGAAGATGATGAATCCTCCTC
TTCTTCTTCCGATGAGGAAGACCGTGATGAATCCAAGAAATGCAAGCGTC
ACGGTCGGCACGGCGGCTTCCACGCCAAGGGTGGAAAGGGCCGTCATGGG
CCCGGTCGCCATGGGCGCGGTCCATGGGGGAAATTCGACCACCCCCCTCA
TCCTGGAGCATTTGGCGCTTGGGGAGCTGACTTTCAAGGACCTCACGGTG
GATTTGGACCACATGGCGGATTCGGCCATGGACCGCATGGTCGGTTCGGG
CCTTACGGGGGTCGACACATGCGCGGTGGCTTCAAACACGGTGGTCGGGG
CGGACCGCACCGTGGCTTTGGCCCTTTTGGATTCAAGGAGTTCGGCCACC
ATCATCACCACCGCAAGCACCACAAGCGCGGTGACTTTTTCCACCCCGAG
GTGGATGTGTTCGACACCACGGAGGCCTTTATCGTGCATGTTTCGCTGCC
TGGAGCGAAGAAGGAAGCGGTGGAAGTGAAGTGGGATCCGAAGAAGTTCG
AGTTGAATGTCAGCGGGACGATTGAGCGTCCTGGCGATGAGGAATTGCTG
AAGACGTTGGCATTGGATGAGCGTTGCGTGGGGACTTTTGACCGCCAGGT
GCGACTGGGAAGTGTGTTCCAGCCCGTGGAAATTCATGTTGAGGGCATCA
CGGCGGAGATGGAGAACGGGGTGTTGAGCATCAAGTTGCCGAAGGTGGAG
ACGGATGTTGTGATGGTGACCCGCGTGGATGTACAGTGAATGGCCAACAT
TCGCGATCTCAATCAACTCCCTCCCTACTGGGAAGTCGTCGCCAGCATGG
AAGAACCAAGCTTTGCTCACCCCTTTTTCGCTGGTCTCAACCACAACCAC
ATGCCCCATGGCGAACACTTTGCCGAGCCTGTGACTGAAGACGAAGAGCC
TACCCAGACCGAGACCGCCGAAGATGATGAATCCTCCTCTTCTTCTTCCG
ATGAGGAAGACCGTGATGAATCCAAGAAATGCAAGCGTCACGGTCGGCAC
GGCGGCTTCCACGCCAAGGGTGGAAAGGGCCGTCATGGGCCCGGTCGCCA
TGGGCGCGGTCCATGGGGGAAATTCGACCACCCCCCTCATCCTGGAGCAT
TTGGCGCTTGGGGAGCTGACTTTCAAGGACCTCACGGTGGATTTGGACCA
CATGGCGGATTCGGCCATGGACCGCATGGTCGGTTCGGGCCTTACGGGGG
TCGACACATGCGCGGTGGCTTCAAACACGGTGGTCGGGGCGGACCGCACC
GTGGCTTTGGCCCTTTTGGATTCAAGGAGTTCGGCCACCATCATCACCAC
CGCAAGCACCACAAGCGCGGTGACTTTTTCCACCCCGAGGTGGATGTGTT
CGACACCACGGAGGCCTTTATCGTGCATGTTTCGCTGCCTGGAGCGAAGA
AGGAAGCGGTGGAAGTGAAGTGGGATCCGAAGAAGTTCGAGTTGAATGTC
AGCGGGACGATTGAGCGTCCTGGCGATGAGGAATTGCTGAAGACGTTGGC
ATTGGATGAGCGTTGCGTGGGGACTTTTGACCGCCAGGTGCGACTGGGAA
GTGTGTTCCAGCCCGTGGAAATTCATGTTGAGGGCATCACGGCGGAGATG
GAGAACGGGGTGTTGAGCATCAAGTTGCCGAAGGTGGAGACGGATGTTGT
GATGGTGACCCGCGTGGATGTACAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002068 |
| DBxref | InterPro:IPR008978 |
| DBxref | PFAM:PF00011 |
| Product | Hsp20/alpha crystallin family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:531909..532916 + |
|
