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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:176854..177739- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10640-T1 ID=CAN33_10640-T1|Name=CAN33_10640-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=886bp|location=Sequence derived from alignment at NKJJ01000009.1:176854..177739- (Aspergillus niger FDAARGOS_311)
ATGTCACCTGCAAAAAGTGGGTTCGCCCTCGTGACCCCGGCTTCGAAAGG
ACTGGGATTCGCCTTTGCGCGACAGCTGCTGTCCAACACGGACCTCCCCG
TCCTTGCGACTGCGCGGAGAGATACCGCACAACTCCGTAAAAGCTTACTG
AAGCAACTCAATGATGGAACTGGAAAGGCGGAGGAGCGGCTCAGAGTCTT
TGAAGTTGACGTGACTGGTACTGAGTAGCATCATCCCCTCATGCCTTCTG
GTCCTGAACAATGTTTTAGATGAGGCGACCATACACGCCATGGCCGCACA
GATACGAGAAGAGATTCCACAGGCTTCCCTGCGTATTGCAATCACCGTAC
CTGGCGTTCTGCACGTGGAGAAGTCTCCGACACAGATCGATGCGGCCAAC
GCTCTGCACAGTTTCCAAGTCAATGCTCTTGGTCCTATGCTTCTGATGAA
GCACTTGGCACCCTTTTTGCCAACAAAGACATCGGCAACCTTTGCGGATG
ATTCTCCATCTGCACATGTACAACGCCCGTGGAAGCTTCCATCGCATGCT
ATCTACGCGATGATGGCCGCGCGAGTTGGGTCCATATCGGACAATGCAAC
AGGGGGCTGGTATTCATACCGTGCTAGCAAAGCCTCCGTCTTTCAGCTGA
CCAAAACTTTCGATCTGTATTTGCGGTCACGGAGCAGAGACCGAGCCTTT
GCGGTGGCGCTGCATCCCGGGACAGTCCAGACTGATTTCACGAAAGATTA
CTGGGATGGCAGACACATGCTGCAGCCAGAAGAATCCGCAGTGAAGCTAT
TACAGCACCTATGTGGTATGCAGACCGGTGACTCCGATGGGCGGGGCCGC
TGTTGGGATTGGAAAGGCGAGGAGGTTCTACCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:176854..177739- >CAN33_10640-T1 ID=CAN33_10640-T1|Name=CAN33_10640-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1668bp|location=Sequence derived from alignment at NKJJ01000009.1:176854..177739- (Aspergillus niger FDAARGOS_311)
ATGAGGCGACCATACACGCCATGGCCGCACAGATACGAGAAGAGATTCCA
CAGGCTTCCCTGCGTATTGCAATCACCGTACCTGGCGTTCTGCACGTGGA
GAAGTCTCCGACACAGATCGATGCGGCCAACGCTCTGCACAGTTTCCAAG
TCAATGCTCTTGGTCCTATGCTTCTGATGAAGCACTTGGCACCCTTTTTG
CCAACAAAGACATCGGCAACCTTTGCGGATGATTCTCCATCTGCACATGT
ACAACGCCCGTGGAAGCTTCCATCGCATGCTATCTACGCGATGATGGCCG
CGCGAGTTGGGTCCATATCGGACAATGCAACAGGGGGCTGGTATTCATAC
CGTGCTAGCAAAGCCTCCGTCTTTCAGCTGACCAAAACTTTCGATCTGTA
TTTGCGGTCACGGAGCAGAGACCGAGCCTTTGCGGTGGCGCTGCATCCCG
GGACAGTCCAGACTGATTTCACGAAAGATTACTGGGATGGCAGACACATG
CTGCAGCCAGAAGAATCCGCAGTGAAGCTATTACAGCACCTATGTGGTAT
GCAGACCGGTGACTCCGATGGGCGGGGCCGCTGTTGGGATTGGAAAGGCG
AGGAGGTTCTACCTTGAATGTCACCTGCAAAAAGTGGGTTCGCCCTCGTG
ACCCCGGCTTCGAAAGGACTGGGATTCGCCTTTGCGCGACAGCTGCTGTC
CAACACGGACCTCCCCGTCCTTGCGACTGCGCGGAGAGATACCGCACAAC
TCCGTAAAAGCTTACTGAAGCAACTCAATGATGGAACTGGAAAGGCGGAG
GAGCGGCTCAGAGTCTTTGAAGTTGACGTGACTGATGAGGCGACCATACA
CGCCATGGCCGCACAGATACGAGAAGAGATTCCACAGGCTTCCCTGCGTA
TTGCAATCACCGTACCTGGCGTTCTGCACGTGGAGAAGTCTCCGACACAG
ATCGATGCGGCCAACGCTCTGCACAGTTTCCAAGTCAATGCTCTTGGTCC
TATGCTTCTGATGAAGCACTTGGCACCCTTTTTGCCAACAAAGACATCGG
CAACCTTTGCGGATGATTCTCCATCTGCACATGTACAACGCCCGTGGAAG
CTTCCATCGCATGCTATCTACGCGATGATGGCCGCGCGAGTTGGGTCCAT
ATCGGACAATGCAACAGGGGGCTGGTATTCATACCGTGCTAGCAAAGCCT
CCGTCTTTCAGCTGACCAAAACTTTCGATCTGTATTTGCGGTCACGGAGC
AGAGACCGAGCCTTTGCGGTGGCGCTGCATCCCGGGACAGTCCAGACTGA
TTTCACGAAAGATTACTGGGATGGCAGACACATGCTGCAGCCAGAAGAAT
CCGCAGTGAAGCTATTACAGCACCTATGTGGTATGCAGACCGGTGACTCC
GATGGGCGGGGCCGCTGTTGGGATTGGAAAGGCGAGGAGGTTCTACCTTG
AATGTCACCTGCAAAAAGTGGGTTCGCCCTCGTGACCCCGGCTTCGAAAG
GACTGGGATTCGCCTTTGCGCGACAGCTGCTGTCCAACACGGACCTCCCC
GTCCTTGCGACTGCGCGGAGAGATACCGCACAACTCCGTAAAAGCTTACT
GAAGCAACTCAATGATGGAACTGGAAAGGCGGAGGAGCGGCTCAGAGTCT
TTGAAGTTGACGTGACTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:176854..177739 - |
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