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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:184135..185232- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10650-T1 ID=CAN33_10650-T1|Name=CAN33_10650-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1098bp|location=Sequence derived from alignment at NKJJ01000009.1:184135..185232- (Aspergillus niger FDAARGOS_311)
ATGGGTAATGATGGTGGCAGGTATGCTCAACAAGCCTCTTACAATCTCCC
CACTCTATCAAAAAGCACAAACTAACTAACCACCCGCATCACCAGTATCC
CAACCCGTCGCGAGCTCGTCCGCGAAGCGGCCCGCAACCCCAGCACAGCG
CAAGTGAAAGAGGCGCAGCGCGAACAACAAGAACACTCGTGGACGACATG
TCCGATATCGCACAACCAGTTGATGCGACCCATTGTCTCCGACAGCGTCG
GGAATCTCTACAACAAAGACGCCATTCTCAGATTCCTTCTTCCCGGCGAC
GAAGCCGATGGCATCAGCTCCAAGGCCGATTGCGAAGAGATCCTCTGTGG
ACGGGTCAAGGGACTCCGGGACGTCGTGGAGCTGAAGTTTGAAGTCGACA
CAGAGCGCGAAGCCCATCCCGCGAATGGAAAGCAGGACAAGCGTGAGGGG
TGGATCTGTCCCGTCACGGCGAAGCAGTTGGGTCCCAATGTAAAGTCGGT
TTATCTGGTGCCGTGCGGTCATGTTTTCTCGGAGGAGGCAATCCGCCAAC
TTAAGGGAGATAAGTGTTTGCAGGTATGTTATCTCAGCCCATACGTTTTT
GGTCTTCATGTTGGTGCTAATGAGATCTAGTGCGACGAGCCATACACCCC
CGACAACGTGATTCCCATCCTTCCCACAAAAGAAGCCGACAAACAGCAGC
TCATTGAGCGTGGACATAAGCTTGCAGAACAAGGTCTCACGCACTCTTTG
AAAAAGGCCCCCGGCTCGAAGAAGCGCAAGAAGAACGCCGCGAATGGTGA
TGCGGCGGATGCGGGCAAGGAACCAAAGCCCACGGAAAAATCTACGAGTG
CGACTGCCAGTCGGAGCAACACATCTACACCCACACCGGGTGGCTCGAGT
GGTATCAAGAATGCTGCTACTGCATTGCTGACGGCGCGGGTGCTGGAGGA
GGAAAACGAGAAGAAAAAGCGGCGGAAGATGCTGGGGACTAGTGACAATA
TTAGCAGTCTCTTCACAAAGGAGACTAAGGATGGCCATGCCAAGAATACG
GATTTCATGACGAGAGGATATAGTCTTCCTGCGGCGGCTAGGAAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:184135..185232- >CAN33_10650-T1 ID=CAN33_10650-T1|Name=CAN33_10650-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2898bp|location=Sequence derived from alignment at NKJJ01000009.1:184135..185232- (Aspergillus niger FDAARGOS_311)
TGCGACGAGCCATACACCCCCGACAACGTGATTCCCATCCTTCCCACAAA
AGAAGCCGACAAACAGCAGCTCATTGAGCGTGGACATAAGCTTGCAGAAC
AAGGTCTCACGCACTCTTTGAAAAAGGCCCCCGGCTCGAAGAAGCGCAAG
AAGAACGCCGCGAATGGTGATGCGGCGGATGCGGGCAAGGAACCAAAGCC
CACGGAAAAATCTACGAGTGCGACTGCCAGTCGGAGCAACACATCTACAC
CCACACCGGGTGGCTCGAGTGGTATCAAGAATGCTGCTACTGCATTGCTG
ACGGCGCGGGTGCTGGAGGAGGAAAACGAGAAGAAAAAGCGGCGGAAGAT
GCTGGGGACTAGTGACAATATTAGCAGTCTCTTCACAAAGGAGACTAAGG
ATGGCCATGCCAAGAATACGGATTTCATGACGAGAGGATATAGTCTTCCT
GCGGCGGCTAGGAAGTAGTATCCCAACCCGTCGCGAGCTCGTCCGCGAAG
CGGCCCGCAACCCCAGCACAGCGCAAGTGAAAGAGGCGCAGCGCGAACAA
CAAGAACACTCGTGGACGACATGTCCGATATCGCACAACCAGTTGATGCG
ACCCATTGTCTCCGACAGCGTCGGGAATCTCTACAACAAAGACGCCATTC
TCAGATTCCTTCTTCCCGGCGACGAAGCCGATGGCATCAGCTCCAAGGCC
GATTGCGAAGAGATCCTCTGTGGACGGGTCAAGGGACTCCGGGACGTCGT
GGAGCTGAAGTTTGAAGTCGACACAGAGCGCGAAGCCCATCCCGCGAATG
GAAAGCAGGACAAGCGTGAGGGGTGGATCTGTCCCGTCACGGCGAAGCAG
TTGGGTCCCAATGTAAAGTCGGTTTATCTGGTGCCGTGCGGTCATGTTTT
CTCGGAGGAGGCAATCCGCCAACTTAAGGGAGATAAGTGTTTGCAGATGG
GTAATGATGGTGGCAGTGCGACGAGCCATACACCCCCGACAACGTGATTC
CCATCCTTCCCACAAAAGAAGCCGACAAACAGCAGCTCATTGAGCGTGGA
CATAAGCTTGCAGAACAAGGTCTCACGCACTCTTTGAAAAAGGCCCCCGG
CTCGAAGAAGCGCAAGAAGAACGCCGCGAATGGTGATGCGGCGGATGCGG
GCAAGGAACCAAAGCCCACGGAAAAATCTACGAGTGCGACTGCCAGTCGG
AGCAACACATCTACACCCACACCGGGTGGCTCGAGTGGTATCAAGAATGC
TGCTACTGCATTGCTGACGGCGCGGGTGCTGGAGGAGGAAAACGAGAAGA
AAAAGCGGCGGAAGATGCTGGGGACTAGTGACAATATTAGCAGTCTCTTC
ACAAAGGAGACTAAGGATGGCCATGCCAAGAATACGGATTTCATGACGAG
AGGATATAGTCTTCCTGCGGCGGCTAGGAAGTAGTATCCCAACCCGTCGC
GAGCTCGTCCGCGAAGCGGCCCGCAACCCCAGCACAGCGCAAGTGAAAGA
GGCGCAGCGCGAACAACAAGAACACTCGTGGACGACATGTCCGATATCGC
ACAACCAGTTGATGCGACCCATTGTCTCCGACAGCGTCGGGAATCTCTAC
AACAAAGACGCCATTCTCAGATTCCTTCTTCCCGGCGACGAAGCCGATGG
CATCAGCTCCAAGGCCGATTGCGAAGAGATCCTCTGTGGACGGGTCAAGG
GACTCCGGGACGTCGTGGAGCTGAAGTTTGAAGTCGACACAGAGCGCGAA
GCCCATCCCGCGAATGGAAAGCAGGACAAGCGTGAGGGGTGGATCTGTCC
CGTCACGGCGAAGCAGTTGGGTCCCAATGTAAAGTCGGTTTATCTGGTGC
CGTGCGGTCATGTTTTCTCGGAGGAGGCAATCCGCCAACTTAAGGGAGAT
AAGTGTTTGCAGATGGGTAATGATGGTGGCAGTGCGACGAGCCATACACC
CCCGACAACGTGATTCCCATCCTTCCCACAAAAGAAGCCGACAAACAGCA
GCTCATTGAGCGTGGACATAAGCTTGCAGAACAAGGTCTCACGCACTCTT
TGAAAAAGGCCCCCGGCTCGAAGAAGCGCAAGAAGAACGCCGCGAATGGT
GATGCGGCGGATGCGGGCAAGGAACCAAAGCCCACGGAAAAATCTACGAG
TGCGACTGCCAGTCGGAGCAACACATCTACACCCACACCGGGTGGCTCGA
GTGGTATCAAGAATGCTGCTACTGCATTGCTGACGGCGCGGGTGCTGGAG
GAGGAAAACGAGAAGAAAAAGCGGCGGAAGATGCTGGGGACTAGTGACAA
TATTAGCAGTCTCTTCACAAAGGAGACTAAGGATGGCCATGCCAAGAATA
CGGATTTCATGACGAGAGGATATAGTCTTCCTGCGGCGGCTAGGAAGTAG
TATCCCAACCCGTCGCGAGCTCGTCCGCGAAGCGGCCCGCAACCCCAGCA
CAGCGCAAGTGAAAGAGGCGCAGCGCGAACAACAAGAACACTCGTGGACG
ACATGTCCGATATCGCACAACCAGTTGATGCGACCCATTGTCTCCGACAG
CGTCGGGAATCTCTACAACAAAGACGCCATTCTCAGATTCCTTCTTCCCG
GCGACGAAGCCGATGGCATCAGCTCCAAGGCCGATTGCGAAGAGATCCTC
TGTGGACGGGTCAAGGGACTCCGGGACGTCGTGGAGCTGAAGTTTGAAGT
CGACACAGAGCGCGAAGCCCATCCCGCGAATGGAAAGCAGGACAAGCGTG
AGGGGTGGATCTGTCCCGTCACGGCGAAGCAGTTGGGTCCCAATGTAAAG
TCGGTTTATCTGGTGCCGTGCGGTCATGTTTTCTCGGAGGAGGCAATCCG
CCAACTTAAGGGAGATAAGTGTTTGCAGATGGGTAATGATGGTGGCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR027799 |
| DBxref | PFAM:PF04641 |
| Product | Rtf2 RING-finger family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:184135..185232 - |
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