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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:450574..451732- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_11075-T1 ID=CAN33_11075-T1|Name=CAN33_11075-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1159bp|location=Sequence derived from alignment at NKJJ01000009.1:450574..451732- (Aspergillus niger FDAARGOS_311)
ATGTCAACAACAAGCCTTCGTGAATCCGAGGTCTTTACCTCCGCTCGTCT
CGTAGCAAGCGACTGCAAACTGCTTCCAAACGACAGATACGGAGAATACT
ATCCCACTGATCCCAAGAATCTTAAGCTTGAATCTAACTTCGGGCCCATG
CTCCCGGAAAAGATCGGATATCTCCAGCCCACATCGAAGGACACCCCGAT
TGAGGTCATGCGAGAGAGACTTATCCGTGATGGGTATCTATTCGTAAGGT
CACCTCCGTATTTATCATACATCTCATACTAATCCACATATAGGTCAAGC
AGCTGCTCCCACGAAACCAAGTCCTAGAATGCCGCAGCAACTATTTCTCA
TACATGGCCCCCTCTGGCCTTCTCAAAGAAGGATCCGACCCAGTCGACGG
GATCTTCAGTGACAAGGATAGCCGCAAGTTTTTACCTCCGGGCAACCTCC
GACGGCTCTTCGGGCTGAAGGACGACTACGAGTCGGAGAAATATCTGGAC
TTGATGATCAAGGCGCACGAGGAGCGATTTTATCTTCAATTATGCGAGAG
TACCGAACTGCGTGAATTTATCCACAAACTCACTGAGTGGAAAGATATCA
CTATGCTTCAGCGGACAATGCTTCGTGCCTTTGTGCCCGATAGCGAGCTG
ACCCCTGTTCATTTCGATCAGATGTACCTTCGCGCGGGTCCCCCAACCAG
CATTACAGCGTGGGTCCCGATCGGAGATATTTCCCTTGAGGGCAGCGGGC
TAATGTACCTTGAGAAATCGGTTGATATCGGTCGACAGACCGAGGAAGAG
TTCACCAGGAATGCAACAAATCTGACGGATGAGGAGCGGGTCTCGGCCTT
CAATAAGAATATGAATGATGGGGGTTTTCTCAGTCGTGATACGGTTGCGT
ATGGCGAAAACGCCAAGCGTAAGTGGTTGATCACGGAATATGAAGCTGGT
GATGTGATCTTCCATGACCCCTTCCTGGTACATGCCAGCTGCAAGAACAA
GGACCCTGAAAGGAGGATTCGACTGGCTACTGATCTGAGATTCGTGAACT
CTAATGAGCCGTATGATAAGGTATGTTGCGTACGCATAATCGCATGGAGC
AATGGCTAACATGACTGTAGCGCTGGATGAAGGTCTGGCGTCCACTTGAT
GGGCTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:450574..451732- >CAN33_11075-T1 ID=CAN33_11075-T1|Name=CAN33_11075-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3177bp|location=Sequence derived from alignment at NKJJ01000009.1:450574..451732- (Aspergillus niger FDAARGOS_311)
CGCTGGATGAAGGTCTGGCGTCCACTTGATGGGCTGTGAGTCAAGCAGCT
GCTCCCACGAAACCAAGTCCTAGAATGCCGCAGCAACTATTTCTCATACA
TGGCCCCCTCTGGCCTTCTCAAAGAAGGATCCGACCCAGTCGACGGGATC
TTCAGTGACAAGGATAGCCGCAAGTTTTTACCTCCGGGCAACCTCCGACG
GCTCTTCGGGCTGAAGGACGACTACGAGTCGGAGAAATATCTGGACTTGA
TGATCAAGGCGCACGAGGAGCGATTTTATCTTCAATTATGCGAGAGTACC
GAACTGCGTGAATTTATCCACAAACTCACTGAGTGGAAAGATATCACTAT
GCTTCAGCGGACAATGCTTCGTGCCTTTGTGCCCGATAGCGAGCTGACCC
CTGTTCATTTCGATCAGATGTACCTTCGCGCGGGTCCCCCAACCAGCATT
ACAGCGTGGGTCCCGATCGGAGATATTTCCCTTGAGGGCAGCGGGCTAAT
GTACCTTGAGAAATCGGTTGATATCGGTCGACAGACCGAGGAAGAGTTCA
CCAGGAATGCAACAAATCTGACGGATGAGGAGCGGGTCTCGGCCTTCAAT
AAGAATATGAATGATGGGGGTTTTCTCAGTCGTGATACGGTTGCGTATGG
CGAAAACGCCAAGCGTAAGTGGTTGATCACGGAATATGAAGCTGGTGATG
TGATCTTCCATGACCCCTTCCTGGTACATGCCAGCTGCAAGAACAAGGAC
CCTGAAAGGAGGATTCGACTGGCTACTGATCTGAGATTCGTGAACTCTAA
TGAGCCGTATGATAAGATGTCAACAACAAGCCTTCGTGAATCCGAGGTCT
TTACCTCCGCTCGTCTCGTAGCAAGCGACTGCAAACTGCTTCCAAACGAC
AGATACGGAGAATACTATCCCACTGATCCCAAGAATCTTAAGCTTGAATC
TAACTTCGGGCCCATGCTCCCGGAAAAGATCGGATATCTCCAGCCCACAT
CGAAGGACACCCCGATTGAGGTCATGCGAGAGAGACTTATCCGTGATGGG
TATCTATTCCGCTGGATGAAGGTCTGGCGTCCACTTGATGGGCTGTGAGT
CAAGCAGCTGCTCCCACGAAACCAAGTCCTAGAATGCCGCAGCAACTATT
TCTCATACATGGCCCCCTCTGGCCTTCTCAAAGAAGGATCCGACCCAGTC
GACGGGATCTTCAGTGACAAGGATAGCCGCAAGTTTTTACCTCCGGGCAA
CCTCCGACGGCTCTTCGGGCTGAAGGACGACTACGAGTCGGAGAAATATC
TGGACTTGATGATCAAGGCGCACGAGGAGCGATTTTATCTTCAATTATGC
GAGAGTACCGAACTGCGTGAATTTATCCACAAACTCACTGAGTGGAAAGA
TATCACTATGCTTCAGCGGACAATGCTTCGTGCCTTTGTGCCCGATAGCG
AGCTGACCCCTGTTCATTTCGATCAGATGTACCTTCGCGCGGGTCCCCCA
ACCAGCATTACAGCGTGGGTCCCGATCGGAGATATTTCCCTTGAGGGCAG
CGGGCTAATGTACCTTGAGAAATCGGTTGATATCGGTCGACAGACCGAGG
AAGAGTTCACCAGGAATGCAACAAATCTGACGGATGAGGAGCGGGTCTCG
GCCTTCAATAAGAATATGAATGATGGGGGTTTTCTCAGTCGTGATACGGT
TGCGTATGGCGAAAACGCCAAGCGTAAGTGGTTGATCACGGAATATGAAG
CTGGTGATGTGATCTTCCATGACCCCTTCCTGGTACATGCCAGCTGCAAG
AACAAGGACCCTGAAAGGAGGATTCGACTGGCTACTGATCTGAGATTCGT
GAACTCTAATGAGCCGTATGATAAGATGTCAACAACAAGCCTTCGTGAAT
CCGAGGTCTTTACCTCCGCTCGTCTCGTAGCAAGCGACTGCAAACTGCTT
CCAAACGACAGATACGGAGAATACTATCCCACTGATCCCAAGAATCTTAA
GCTTGAATCTAACTTCGGGCCCATGCTCCCGGAAAAGATCGGATATCTCC
AGCCCACATCGAAGGACACCCCGATTGAGGTCATGCGAGAGAGACTTATC
CGTGATGGGTATCTATTCCGCTGGATGAAGGTCTGGCGTCCACTTGATGG
GCTGTGAGTCAAGCAGCTGCTCCCACGAAACCAAGTCCTAGAATGCCGCA
GCAACTATTTCTCATACATGGCCCCCTCTGGCCTTCTCAAAGAAGGATCC
GACCCAGTCGACGGGATCTTCAGTGACAAGGATAGCCGCAAGTTTTTACC
TCCGGGCAACCTCCGACGGCTCTTCGGGCTGAAGGACGACTACGAGTCGG
AGAAATATCTGGACTTGATGATCAAGGCGCACGAGGAGCGATTTTATCTT
CAATTATGCGAGAGTACCGAACTGCGTGAATTTATCCACAAACTCACTGA
GTGGAAAGATATCACTATGCTTCAGCGGACAATGCTTCGTGCCTTTGTGC
CCGATAGCGAGCTGACCCCTGTTCATTTCGATCAGATGTACCTTCGCGCG
GGTCCCCCAACCAGCATTACAGCGTGGGTCCCGATCGGAGATATTTCCCT
TGAGGGCAGCGGGCTAATGTACCTTGAGAAATCGGTTGATATCGGTCGAC
AGACCGAGGAAGAGTTCACCAGGAATGCAACAAATCTGACGGATGAGGAG
CGGGTCTCGGCCTTCAATAAGAATATGAATGATGGGGGTTTTCTCAGTCG
TGATACGGTTGCGTATGGCGAAAACGCCAAGCGTAAGTGGTTGATCACGG
AATATGAAGCTGGTGATGTGATCTTCCATGACCCCTTCCTGGTACATGCC
AGCTGCAAGAACAAGGACCCTGAAAGGAGGATTCGACTGGCTACTGATCT
GAGATTCGTGAACTCTAATGAGCCGTATGATAAGATGTCAACAACAAGCC
TTCGTGAATCCGAGGTCTTTACCTCCGCTCGTCTCGTAGCAAGCGACTGC
AAACTGCTTCCAAACGACAGATACGGAGAATACTATCCCACTGATCCCAA
GAATCTTAAGCTTGAATCTAACTTCGGGCCCATGCTCCCGGAAAAGATCG
GATATCTCCAGCCCACATCGAAGGACACCCCGATTGAGGTCATGCGAGAG
AGACTTATCCGTGATGGGTATCTATTC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | Phytanoyl-CoA dioxygenase (PhyH) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:450574..451732 - |
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