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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:546013..546986+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_11240-T1 ID=CAN33_11240-T1|Name=CAN33_11240-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=974bp|location=Sequence derived from alignment at NKJJ01000009.1:546013..546986+ (Aspergillus niger FDAARGOS_311)
ATGACTGTCAAGCAACCCCCAATCCGACGCATCGACCGGGCCGACGTGGA
GGCCATCATCCAAGCTATCATCGAGGATGGCTGCTGTATCATCAAGGATT
TCACCGATGTAGCGACTGTAAAGCAGGTTAATGAGGAGGTACAGTCCTAC
CTTGATGCCGACAAGCCATGGAAGGTAGGTGGACTGTCCGGTCTAATCCT
TGCATGTCTAACAACATCCAGGGTGACCTCTTCCCACCCGAAACCCGCCG
CTGTGCGAACCTCGCAGGTCGCAGCAAGACTGCCCGGGAGAACTGGCTGA
TTGACCCGCTTATTCGTACGTTAACAGCAAGATTCGTTGACAAGACGACT
TCCAACTTCTACGGAGAAACGAAGCATACGTATACCAGCGAGGCGATATG
CTCGATCGCGATGACTTTCGACATTGGCCCTGGCGCGAAGGCACAGCGGC
TTCATCGTGACGACAAGAATTTTCATGTTGATCATGAAGAGCAGAGCGCT
ACGGGCTATCGGGTGGGCTCGGATGTGATGATGGCCTTCATGGTTCCCGG
GATCAAGACAACAGTCGAGAATGGTGCCACCATCGCTATCCCCGGTAGTC
ACCTGTGGGGATCCGACCGGGCACCCAAGCTGGATGAGGCCGTGGCGGCG
GAGATGAATGTGACCGACTGCTGGGTGATGCTGGGAGGACTGTATCATGC
AGGGGGTGCGAATGTCACACAAAACGAACGACGGGTGGTACATGGCATGT
TCTTCACGCGCGGATTCCATCGACAGGAGGAAAATGTTTATCTTGCCAAC
ACAGCTGAAGAAGTTCTATCTTGGTCTCCGGAGGCTCAGAAGGTGATGGG
ATACGAGGTATCTAGTCCCAACATTGGCTTTGTTAACTTCCAGACCCCGC
TTCAATATTTGCGCGGAGAGGGAGTCGGGGACGCATTTGTGGACTTTGAC
CCTTCCCAGGAGCAACCTAAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:546013..546986+ >CAN33_11240-T1 ID=CAN33_11240-T1|Name=CAN33_11240-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1854bp|location=Sequence derived from alignment at NKJJ01000009.1:546013..546986+ (Aspergillus niger FDAARGOS_311)
ATGACTGTCAAGCAACCCCCAATCCGACGCATCGACCGGGCCGACGTGGA
GGCCATCATCCAAGCTATCATCGAGGATGGCTGCTGTATCATCAAGGATT
TCACCGATGTAGCGACTGTAAAGCAGGTTAATGAGGAGGTACAGTCCTAC
CTTGATGCCGACAAGCCATGGAAGGGTGACCTCTTCCCACCCGAAACCCG
CCGCTGTGCGAACCTCGCAGGTCGCAGCAAGACTGCCCGGGAGAACTGGC
TGATTGACCCGCTTATTCGTACGTTAACAGCAAGATTCGTTGACAAGACG
ACTTCCAACTTCTACGGAGAAACGAAGCATACGTATACCAGCGAGGCGAT
ATGCTCGATCGCGATGACTTTCGACATTGGCCCTGGCGCGAAGGCACAGC
GGCTTCATCGTGACGACAAGAATTTTCATGTTGATCATGAAGAGCAGAGC
GCTACGGGCTATCGGGTGGGCTCGGATGTGATGATGGCCTTCATGGTTCC
CGGGATCAAGACAACAGTCGAGAATGGTGCCACCATCGCTATCCCCGGTA
GTCACCTGTGGGGATCCGACCGGGCACCCAAGCTGGATGAGGCCGTGGCG
GCGGAGATGAATGTGACCGACTGCTGGGTGATGCTGGGAGGACTGTATCA
TGCAGGGGGTGCGAATGTCACACAAAACGAACGACGGGTGGTACATGGCA
TGTTCTTCACGCGCGGATTCCATCGACAGGAGGAAAATGTTTATCTTGCC
AACACAGCTGAAGAAGTTCTATCTTGGTCTCCGGAGGCTCAGAAGGTGAT
GGGATACGAGGTATCTAGTCCCAACATTGGCTTTGTTAACTTCCAGACCC
CGCTTCAATATTTGCGCGGAGAGGGAGTCGGGGACGCATTTGTGGACTTT
GACCCTTCCCAGGAGCAACCTAAATGAATGACTGTCAAGCAACCCCCAAT
CCGACGCATCGACCGGGCCGACGTGGAGGCCATCATCCAAGCTATCATCG
AGGATGGCTGCTGTATCATCAAGGATTTCACCGATGTAGCGACTGTAAAG
CAGGTTAATGAGGAGGTACAGTCCTACCTTGATGCCGACAAGCCATGGAA
GGGTGACCTCTTCCCACCCGAAACCCGCCGCTGTGCGAACCTCGCAGGTC
GCAGCAAGACTGCCCGGGAGAACTGGCTGATTGACCCGCTTATTCGTACG
TTAACAGCAAGATTCGTTGACAAGACGACTTCCAACTTCTACGGAGAAAC
GAAGCATACGTATACCAGCGAGGCGATATGCTCGATCGCGATGACTTTCG
ACATTGGCCCTGGCGCGAAGGCACAGCGGCTTCATCGTGACGACAAGAAT
TTTCATGTTGATCATGAAGAGCAGAGCGCTACGGGCTATCGGGTGGGCTC
GGATGTGATGATGGCCTTCATGGTTCCCGGGATCAAGACAACAGTCGAGA
ATGGTGCCACCATCGCTATCCCCGGTAGTCACCTGTGGGGATCCGACCGG
GCACCCAAGCTGGATGAGGCCGTGGCGGCGGAGATGAATGTGACCGACTG
CTGGGTGATGCTGGGAGGACTGTATCATGCAGGGGGTGCGAATGTCACAC
AAAACGAACGACGGGTGGTACATGGCATGTTCTTCACGCGCGGATTCCAT
CGACAGGAGGAAAATGTTTATCTTGCCAACACAGCTGAAGAAGTTCTATC
TTGGTCTCCGGAGGCTCAGAAGGTGATGGGATACGAGGTATCTAGTCCCA
ACATTGGCTTTGTTAACTTCCAGACCCCGCTTCAATATTTGCGCGGAGAG
GGAGTCGGGGACGCATTTGTGGACTTTGACCCTTCCCAGGAGCAACCTAA
ATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | Phytanoyl-CoA dioxygenase (PhyH) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:546013..546986 + |
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