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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:611755..613904- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_11360-T1 ID=CAN33_11360-T1|Name=CAN33_11360-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2150bp|location=Sequence derived from alignment at NKJJ01000009.1:611755..613904- (Aspergillus niger FDAARGOS_311)
ATGAGTGAGCAAGAGAATCCTATCATCCTTCACTGCATTTATTGCAACCA
TGAACACCCTGAGCTCGATGGGGATGCTCTCTACGAGCACATTGAACAGA
ATCTCGATGACCTTAATAGACGTTTCAGGGAAAGAAGAGCCCTCAACGAG
GAGCATCATACGATCATCGACTGCCCAATGTGGCCTGGTTGCCGTCACAG
GCCTCTGACCTCTCTAGAGGGGGACGGCCATGCAATTAGCTGGACATACG
TGGAAATAGCATATGACACGATGGGGGACCATAAGGAATTTATTTCTTGC
GAATTATGCGGCACCCGTCATGTCATATTGACTGGACAATTCCTCGAAAT
TCACATCCGCGATTGCCATAGCTTAGTGTTCGAGATTCCCATGGTTGCGC
ACCCTTCGCCATCTGAACTAACTGAACTCCCACCGTCAACGATGTCTGGA
TCTGACCCCATGGAGCCCGAAGCAGCAGAGGAGTCTCAGGTGGACGTGTC
TGAAGCTGATGTAGTTGAAGCGGAGGATGCTAGGGCGCAGGGGTCCGCAG
AGGAGGCCGCCGCCGAAGCCGAGTACGACTCCGAAGAGGAAGAACCCGAA
GACCTACCTCATGACCTCGGACCATTCCGCACGAGTCTCGAGCAAGCACT
TTCGAATAACATCTTGACTGTCGAGAACTTCGCACAGGTTATATGCACCA
TATGCCGTGATCATAGAGTTCCCGTCAAACACCTTCCCCGGCTCAATTTC
TATAACGCTCTTCGAGCCAGGCTTGCTCCGCTTCTAGATCAATTGATGTA
CAATCCCAGGGTCCACAACAATAATCGAGTGACCGCCCAATATGCCACGC
GCAGAATCCAAGGGACCACCATTGGCGAAGCTATCCTTGAAAACAAAGTC
AGGCCGATCCAGGTTCTCTGTGATCTAGGGTTCCGCATCAACGATATTAT
GCACAGCAACCTGACCGTGCTGGGTGCGGCCATCCTACGCCAGCAAAGCA
AAATCGCCCAATACCTCCTGAACCCTGAATTCAAGGAAAAGTACGGCGTC
GACCCTTTCCGTCCCGTAACTCTGGACACTAGATTTGCAGACAGCACCAC
TCCGATTGCCCTATGCGTGAACAGATATGAGTACGGGGTCCTAAAAACCA
TCCTCAGCTACGAGACACCCCCGAACGTCATGCGAACCGAAGACGTAAAT
CAGCTCTTCCGATCGCAGCTATGGAACCGCCTTAGCCATATAGTCCACGA
CCAATACTTCAGGGACGCCATCTTCGCGGCACGCAACGCTCCCATCTCCC
CGATCCACTGCGCTGTTGTCAACCCTGACCTTTTCGTCCTGCGAAACCTC
GTCTGGGTCCGAGCAGATCACCCAAACATACTCCCCGATTTAGCCGATCA
CATCAACGCCGAGAACAACACCATAATCCAGAACGCAACCCCTCTCCTTC
TCGCCCTCCACCGCCAAAACGCAGAAGCTCTGACTATCCTCCTCAAAACT
CCCGGCATCGACCCCTCACGGCCAAACTCCCGCATGCTCACTCCCCTATA
TTACGCTGCCCGCATAGCTAATCTCGAACTAGCCCGCATCCTAATAGAGT
ACCGTGCTGATCCGAGAGTTGTCACAGCCATGGGCACGCCGCTTCATGCA
CTGGTGCATACGTATAGGGAAGCCAAGGAACGGCGCATGGCTGAGAACCC
CCAGGAGTGGGCATTCCTCAAAGAAAAGCTTGCACGGCTTCAGCTTCTTT
TCTTGGAGAGTGGCGTCGACCCAGATGCTAGGCCTGATGGGGCTGATGCC
ATGGGCAGGACGGCTGGCGAGGAGGCTGAGCTCGTGGAGTATTGGGAGTT
TTCGAATGTGCTTGTTGCGTTTAGAAATGCTGCTGCTGCTCCTGCTCCTG
CTGCGGTGGCGTGAGATAGGTGTTGATATTCAATACCGTAGTACCTTGCT
TGCGTAGGGAAAAACAAAAATCAAATATCATATCTTGTCCTCAATTCAAT
TGGCGGATAACTTTTGCTTTGAGATCGCTAGAAATAAAACAAAAACACGT
TGCTTGATCATACTTCCTCTGATATATTTCGAACTGTAGTCACCTAATCC
GGCTTCAATATGTCCCTTACTAAACATCGTCCCTATTGTCTAGCTTGTAG
back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:611755..613904- >CAN33_11360-T1 ID=CAN33_11360-T1|Name=CAN33_11360-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3750bp|location=Sequence derived from alignment at NKJJ01000009.1:611755..613904- (Aspergillus niger FDAARGOS_311)
CTTGTAGATGAGTGAGCAAGAGAATCCTATCATCCTTCACTGCATTTATT
GCAACCATGAACACCCTGAGCTCGATGGGGATGCTCTCTACGAGCACATT
GAACAGAATCTCGATGACCTTAATAGACGTTTCAGGGAAAGAAGAGCCCT
CAACGAGGAGCATCATACGATCATCGACTGCCCAATGTGGCCTGGTTGCC
GTCACAGGCCTCTGACCTCTCTAGAGGGGGACGGCCATGCAATTAGCTGG
ACATACGTGGAAATAGCATATGACACGATGGGGGACCATAAGGAATTTAT
TTCTTGCGAATTATGCGGCACCCGTCATGTCATATTGACTGGACAATTCC
TCGAAATTCACATCCGCGATTGCCATAGCTTAGTGTTCGAGATTCCCATG
GTTGCGCACCCTTCGCCATCTGAACTAACTGAACTCCCACCGTCAACGAT
GTCTGGATCTGACCCCATGGAGCCCGAAGCAGCAGAGGAGTCTCAGGTGG
ACGTGTCTGAAGCTGATGTAGTTGAAGCGGAGGATGCTAGGGCGCAGGGG
TCCGCAGAGGAGGCCGCCGCCGAAGCCGAGTACGACTCCGAAGAGGAAGA
ACCCGAAGACCTACCTCATGACCTCGGACCATTCCGCACGAGTCTCGAGC
AAGCACTTTCGAATAACATCTTGACTGTCGAGAACTTCGCACAGGTTATA
TGCACCATATGCCGTGATCATAGAGTTCCCGTCAAACACCTTCCCCGGCT
CAATTTCTATAACGCTCTTCGAGCCAGGCTTGCTCCGCTTCTAGATCAAT
TGATGTACAATCCCAGGGTCCACAACAATAATCGAGTGACCGCCCAATAT
GCCACGCGCAGAATCCAAGGGACCACCATTGGCGAAGCTATCCTTGAAAA
CAAAGTCAGGCCGATCCAGGTTCTCTGTGATCTAGGGTTCCGCATCAACG
ATATTATGCACAGCAACCTGACCGTGCTGGGTGCGGCCATCCTACGCCAG
CAAAGCAAAATCGCCCAATACCTCCTGAACCCTGAATTCAAGGAAAAGTA
CGGCGTCGACCCTTTCCGTCCCGTAACTCTGGACACTAGATTTGCAGACA
GCACCACTCCGATTGCCCTATGCGTGAACAGATATGAGTACGGGGTCCTA
AAAACCATCCTCAGCTACGAGACACCCCCGAACGTCATGCGAACCGAAGA
CGTAAATCAGCTCTTCCGATCGCAGCTATGGAACCGCCTTAGCCATATAG
TCCACGACCAATACTTCAGGGACGCCATCTTCGCGGCACGCAACGCTCCC
ATCTCCCCGATCCACTGCGCTGTTGTCAACCCTGACCTTTTCGTCCTGCG
AAACCTCGTCTGGGTCCGAGCAGATCACCCAAACATACTCCCCGATTTAG
CCGATCACATCAACGCCGAGAACAACACCATAATCCAGAACGCAACCCCT
CTCCTTCTCGCCCTCCACCGCCAAAACGCAGAAGCTCTGACTATCCTCCT
CAAAACTCCCGGCATCGACCCCTCACGGCCAAACTCCCGCATGCTCACTC
CCCTATATTACGCTGCCCGCATAGCTAATCTCGAACTAGCCCGCATCCTA
ATAGAGTACCGTGCTGATCCGAGAGTTGTCACAGCCATGGGCACGCCGCT
TCATGCACTGGTGCATACGTATAGGGAAGCCAAGGAACGGCGCATGGCTG
AGAACCCCCAGGAGTGGGCATTCCTCAAAGAAAAGCTTGCACGGCTTCAG
CTTCTTTTCTTGGAGAGTGGCGTCGACCCAGATGCTAGGCCTGATGGGGC
TGATGCCATGGGCAGGACGGCTGGCGAGGAGGCTGAGCTCGTGGAGTATT
GGGAGTTTTCGAATGTGCTTGTTGCCTTGTAGATGAGTGAGCAAGAGAAT
CCTATCATCCTTCACTGCATTTATTGCAACCATGAACACCCTGAGCTCGA
TGGGGATGCTCTCTACGAGCACATTGAACAGAATCTCGATGACCTTAATA
GACGTTTCAGGGAAAGAAGAGCCCTCAACGAGGAGCATCATACGATCATC
GACTGCCCAATGTGGCCTGGTTGCCGTCACAGGCCTCTGACCTCTCTAGA
GGGGGACGGCCATGCAATTAGCTGGACATACGTGGAAATAGCATATGACA
CGATGGGGGACCATAAGGAATTTATTTCTTGCGAATTATGCGGCACCCGT
CATGTCATATTGACTGGACAATTCCTCGAAATTCACATCCGCGATTGCCA
TAGCTTAGTGTTCGAGATTCCCATGGTTGCGCACCCTTCGCCATCTGAAC
TAACTGAACTCCCACCGTCAACGATGTCTGGATCTGACCCCATGGAGCCC
GAAGCAGCAGAGGAGTCTCAGGTGGACGTGTCTGAAGCTGATGTAGTTGA
AGCGGAGGATGCTAGGGCGCAGGGGTCCGCAGAGGAGGCCGCCGCCGAAG
CCGAGTACGACTCCGAAGAGGAAGAACCCGAAGACCTACCTCATGACCTC
GGACCATTCCGCACGAGTCTCGAGCAAGCACTTTCGAATAACATCTTGAC
TGTCGAGAACTTCGCACAGGTTATATGCACCATATGCCGTGATCATAGAG
TTCCCGTCAAACACCTTCCCCGGCTCAATTTCTATAACGCTCTTCGAGCC
AGGCTTGCTCCGCTTCTAGATCAATTGATGTACAATCCCAGGGTCCACAA
CAATAATCGAGTGACCGCCCAATATGCCACGCGCAGAATCCAAGGGACCA
CCATTGGCGAAGCTATCCTTGAAAACAAAGTCAGGCCGATCCAGGTTCTC
TGTGATCTAGGGTTCCGCATCAACGATATTATGCACAGCAACCTGACCGT
GCTGGGTGCGGCCATCCTACGCCAGCAAAGCAAAATCGCCCAATACCTCC
TGAACCCTGAATTCAAGGAAAAGTACGGCGTCGACCCTTTCCGTCCCGTA
ACTCTGGACACTAGATTTGCAGACAGCACCACTCCGATTGCCCTATGCGT
GAACAGATATGAGTACGGGGTCCTAAAAACCATCCTCAGCTACGAGACAC
CCCCGAACGTCATGCGAACCGAAGACGTAAATCAGCTCTTCCGATCGCAG
CTATGGAACCGCCTTAGCCATATAGTCCACGACCAATACTTCAGGGACGC
CATCTTCGCGGCACGCAACGCTCCCATCTCCCCGATCCACTGCGCTGTTG
TCAACCCTGACCTTTTCGTCCTGCGAAACCTCGTCTGGGTCCGAGCAGAT
CACCCAAACATACTCCCCGATTTAGCCGATCACATCAACGCCGAGAACAA
CACCATAATCCAGAACGCAACCCCTCTCCTTCTCGCCCTCCACCGCCAAA
ACGCAGAAGCTCTGACTATCCTCCTCAAAACTCCCGGCATCGACCCCTCA
CGGCCAAACTCCCGCATGCTCACTCCCCTATATTACGCTGCCCGCATAGC
TAATCTCGAACTAGCCCGCATCCTAATAGAGTACCGTGCTGATCCGAGAG
TTGTCACAGCCATGGGCACGCCGCTTCATGCACTGGTGCATACGTATAGG
GAAGCCAAGGAACGGCGCATGGCTGAGAACCCCCAGGAGTGGGCATTCCT
CAAAGAAAAGCTTGCACGGCTTCAGCTTCTTTTCTTGGAGAGTGGCGTCG
ACCCAGATGCTAGGCCTGATGGGGCTGATGCCATGGGCAGGACGGCTGGC
GAGGAGGCTGAGCTCGTGGAGTATTGGGAGTTTTCGAATGTGCTTGTTGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF12796 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:611755..613904 - |
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