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CAN33_1150-T1, CAN33_1150-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1150-T1
Unique NameCAN33_1150-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:659721..660919+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1150-T1 ID=CAN33_1150-T1|Name=CAN33_1150-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1199bp|location=Sequence derived from alignment at NKJJ01000004.1:659721..660919+ (Aspergillus niger FDAARGOS_311)
ATGGGTCGCCTTCACTCTAAGGGAAAGGGCATTTCGTCCTCCGCTCTCCC
CTACTCTCGCACTCCCCCGAGCTGGTTCAAGGCTTCCACCGAGCAGGTTG
TTGAGCAGATCTGCAAGCTCGCCAAGAAGGGTGCTACCCCCTCCCAGATC
GGTGTTGTCCTCCGTGACAGCCACGGTGTTGCCCAGGTCAAGACTGTCAC
TGGTAAGATTCCCCTCTCAATTCTCAAATTGCGGGGATGGGAAGGATACT
AATATGTGGATGAATAGGTAACAAGATCCTCCGTATCTTGAAGTCCAACG
GTACGACATCACCGACATGTTCCCTTTCACCAGTCGCACCAGTTATATGA
GCATGTTGTGGATGTGAATATGGCAGCGGAATATGGAATAGGCGCGAGCA
GAGCAGCAGCTAGGACCCGGATTGGAATATATCCGGCGATTCGATTTCAG
CCAGGTCACGGGTTTGATTGATGGACAACGATACGATGTATTCTGCACGG
AAGTGAAGAAGAAGGAAGAGAACGAGGTTGAAACATACCCGGAATCGTTC
TCGACTCCGTATCGACATGGACACTCGCAAACCTACAGCCAATCGCAATC
GCAGCAATCCCGGCGCTCTCTGCCTCCCACCATCTCTACACCGCACACCC
ACAACATGTCCATAAAACTGGAGGGCACCAGAAGCAAAACTTCAACACCA
ACTCGCAGAAATGCAGTTGGATGTTGGAAGTTTCTTTTGCGTGATCCCGT
ATGCCTCTGCTTGGTCAAACCACAGGCTGACAGAGTGATCTATTAAACAG
GCCTTGCCCCCGAGCTCCCCGAGGACCTGTACCACCTCATCAAGAAGGTA
TGCCATTCCCCATTTATCTGAAAACACGATGGTAGATTGAATACTAACAA
ACTGGTATTAGGCCGTCGCCGTCCGCAAGCACCTTGAGCGTAACCGCAAG
GACAAGGACAGCAAGTTCCGCCTGATTCTCATCGAGTCTCGTATCCACCG
TCTGTCTCGTTACTACAAGTCCGTCGGTGTCCTCCCCCCACCTGGCGTTA
CGAGTCCGCCACTGCTTCCACCCTCGTTGCTTAAGCGCGTGCACTTCTTG
TGCTGGGGTAGAAGTTGTTGTGGTGAAGTGGCTGTCGTCGTGGTTGATTG
GGTCGATCTGGAAGGGTTGATTCGCGATAGTCATGAAATAAAATTATGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:659721..660919+

>CAN33_1150-T1 ID=CAN33_1150-T1|Name=CAN33_1150-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4455bp|location=Sequence derived from alignment at NKJJ01000004.1:659721..660919+ (Aspergillus niger FDAARGOS_311)
ATGGGTCGCCTTCACTCTAAGGGAAAGGGCATTTCGTCCTCCGCTCTCCC
CTACTCTCGCACTCCCCCGAGCTGGTTCAAGGCTTCCACCGAGCAGGTTG
TTGAGCAGATCTGCAAGCTCGCCAAGAAGGGTGCTACCCCCTCCCAGATC
GGTGTTGTCCTCCGTGACAGCCACGGTGTTGCCCAGGTCAAGACTGTCAC
TGGTAACAAGATCCTCCGTATCTTGAAGTCCAACGAGCAGCAGCTAGGAC
CCGGATTGGAATATATCCGGCGATTCGATTTCAGCCAGGTCACGGGTTTG
ATTGATGGACAACGATACGATGTATTCTGCACGGAAGTGAAGAAGAAGGA
AGAGAACGAGGTTGAAACATACCCGGAATCGTTCTCGACTCCGTATCGAC
ATGGACACTCGCAAACCTACAGCCAATCGCAATCGCAGCAATCCCGGCGC
TCTCTGCCTCCCACCATCTCTACACCGCACACCCACAACATGTCCATAAA
ACTGGAGGGCACCAGAAGCAAAACTTCAACACCAACTCGCAGAAATGCAG
TTGGATGCCTTGCCCCCGAGCTCCCCGAGGACCTGTACCACCTCATCAAG
AAGGCCGTCGCCGTCCGCAAGCACCTTGAGCGTAACCGCAAGGACAAGGA
CAGCAAGTTCCGCCTGATTCTCATCGAGTCTCGTATCCACCGTCTGTCTC
GTTACTACAAGTCCGTCGGTGTCCTCCCCCCACCTGGCGTTACGAGTCCG
CCACTGCTTCCACCCTCGTTGCTTAAGCGCGTGCACTTCTTGTGCTGGGG
TAGAAGTTGTTGTGGTGAAGTGGCTGTCGTCGTGGTTGATTGGGTCGATC
TGGAAGGGTTGATTCGCGATAGTCATGAAATAAAATTATGAATGGGTCGC
CTTCACTCTAAGGGAAAGGGCATTTCGTCCTCCGCTCTCCCCTACTCTCG
CACTCCCCCGAGCTGGTTCAAGGCTTCCACCGAGCAGGTTGTTGAGCAGA
TCTGCAAGCTCGCCAAGAAGGGTGCTACCCCCTCCCAGATCGGTGTTGTC
CTCCGTGACAGCCACGGTGTTGCCCAGGTCAAGACTGTCACTGGTAACAA
GATCCTCCGTATCTTGAAGTCCAACGAGCAGCAGCTAGGACCCGGATTGG
AATATATCCGGCGATTCGATTTCAGCCAGGTCACGGGTTTGATTGATGGA
CAACGATACGATGTATTCTGCACGGAAGTGAAGAAGAAGGAAGAGAACGA
GGTTGAAACATACCCGGAATCGTTCTCGACTCCGTATCGACATGGACACT
CGCAAACCTACAGCCAATCGCAATCGCAGCAATCCCGGCGCTCTCTGCCT
CCCACCATCTCTACACCGCACACCCACAACATGTCCATAAAACTGGAGGG
CACCAGAAGCAAAACTTCAACACCAACTCGCAGAAATGCAGTTGGATGCC
TTGCCCCCGAGCTCCCCGAGGACCTGTACCACCTCATCAAGAAGGCCGTC
GCCGTCCGCAAGCACCTTGAGCGTAACCGCAAGGACAAGGACAGCAAGTT
CCGCCTGATTCTCATCGAGTCTCGTATCCACCGTCTGTCTCGTTACTACA
AGTCCGTCGGTGTCCTCCCCCCACCTGGCGTTACGAGTCCGCCACTGCTT
CCACCCTCGTTGCTTAAGCGCGTGCACTTCTTGTGCTGGGGTAGAAGTTG
TTGTGGTGAAGTGGCTGTCGTCGTGGTTGATTGGGTCGATCTGGAAGGGT
TGATTCGCGATAGTCATGAAATAAAATTATGAATGGGTCGCCTTCACTCT
AAGGGAAAGGGCATTTCGTCCTCCGCTCTCCCCTACTCTCGCACTCCCCC
GAGCTGGTTCAAGGCTTCCACCGAGCAGGTTGTTGAGCAGATCTGCAAGC
TCGCCAAGAAGGGTGCTACCCCCTCCCAGATCGGTGTTGTCCTCCGTGAC
AGCCACGGTGTTGCCCAGGTCAAGACTGTCACTGGTAACAAGATCCTCCG
TATCTTGAAGTCCAACGAGCAGCAGCTAGGACCCGGATTGGAATATATCC
GGCGATTCGATTTCAGCCAGGTCACGGGTTTGATTGATGGACAACGATAC
GATGTATTCTGCACGGAAGTGAAGAAGAAGGAAGAGAACGAGGTTGAAAC
ATACCCGGAATCGTTCTCGACTCCGTATCGACATGGACACTCGCAAACCT
ACAGCCAATCGCAATCGCAGCAATCCCGGCGCTCTCTGCCTCCCACCATC
TCTACACCGCACACCCACAACATGTCCATAAAACTGGAGGGCACCAGAAG
CAAAACTTCAACACCAACTCGCAGAAATGCAGTTGGATGCCTTGCCCCCG
AGCTCCCCGAGGACCTGTACCACCTCATCAAGAAGGCCGTCGCCGTCCGC
AAGCACCTTGAGCGTAACCGCAAGGACAAGGACAGCAAGTTCCGCCTGAT
TCTCATCGAGTCTCGTATCCACCGTCTGTCTCGTTACTACAAGTCCGTCG
GTGTCCTCCCCCCACCTGGCGTTACGAGTCCGCCACTGCTTCCACCCTCG
TTGCTTAAGCGCGTGCACTTCTTGTGCTGGGGTAGAAGTTGTTGTGGTGA
AGTGGCTGTCGTCGTGGTTGATTGGGTCGATCTGGAAGGGTTGATTCGCG
ATAGTCATGAAATAAAATTATGAATGGGTCGCCTTCACTCTAAGGGAAAG
GGCATTTCGTCCTCCGCTCTCCCCTACTCTCGCACTCCCCCGAGCTGGTT
CAAGGCTTCCACCGAGCAGGTTGTTGAGCAGATCTGCAAGCTCGCCAAGA
AGGGTGCTACCCCCTCCCAGATCGGTGTTGTCCTCCGTGACAGCCACGGT
GTTGCCCAGGTCAAGACTGTCACTGGTAACAAGATCCTCCGTATCTTGAA
GTCCAACGAGCAGCAGCTAGGACCCGGATTGGAATATATCCGGCGATTCG
ATTTCAGCCAGGTCACGGGTTTGATTGATGGACAACGATACGATGTATTC
TGCACGGAAGTGAAGAAGAAGGAAGAGAACGAGGTTGAAACATACCCGGA
ATCGTTCTCGACTCCGTATCGACATGGACACTCGCAAACCTACAGCCAAT
CGCAATCGCAGCAATCCCGGCGCTCTCTGCCTCCCACCATCTCTACACCG
CACACCCACAACATGTCCATAAAACTGGAGGGCACCAGAAGCAAAACTTC
AACACCAACTCGCAGAAATGCAGTTGGATGCCTTGCCCCCGAGCTCCCCG
AGGACCTGTACCACCTCATCAAGAAGGCCGTCGCCGTCCGCAAGCACCTT
GAGCGTAACCGCAAGGACAAGGACAGCAAGTTCCGCCTGATTCTCATCGA
GTCTCGTATCCACCGTCTGTCTCGTTACTACAAGTCCGTCGGTGTCCTCC
CCCCACCTGGCGTTACGAGTCCGCCACTGCTTCCACCCTCGTTGCTTAAG
CGCGTGCACTTCTTGTGCTGGGGTAGAAGTTGTTGTGGTGAAGTGGCTGT
CGTCGTGGTTGATTGGGTCGATCTGGAAGGGTTGATTCGCGATAGTCATG
AAATAAAATTATGAATGGGTCGCCTTCACTCTAAGGGAAAGGGCATTTCG
TCCTCCGCTCTCCCCTACTCTCGCACTCCCCCGAGCTGGTTCAAGGCTTC
CACCGAGCAGGTTGTTGAGCAGATCTGCAAGCTCGCCAAGAAGGGTGCTA
CCCCCTCCCAGATCGGTGTTGTCCTCCGTGACAGCCACGGTGTTGCCCAG
GTCAAGACTGTCACTGGTAACAAGATCCTCCGTATCTTGAAGTCCAACGA
GCAGCAGCTAGGACCCGGATTGGAATATATCCGGCGATTCGATTTCAGCC
AGGTCACGGGTTTGATTGATGGACAACGATACGATGTATTCTGCACGGAA
GTGAAGAAGAAGGAAGAGAACGAGGTTGAAACATACCCGGAATCGTTCTC
GACTCCGTATCGACATGGACACTCGCAAACCTACAGCCAATCGCAATCGC
AGCAATCCCGGCGCTCTCTGCCTCCCACCATCTCTACACCGCACACCCAC
AACATGTCCATAAAACTGGAGGGCACCAGAAGCAAAACTTCAACACCAAC
TCGCAGAAATGCAGTTGGATGCCTTGCCCCCGAGCTCCCCGAGGACCTGT
ACCACCTCATCAAGAAGGCCGTCGCCGTCCGCAAGCACCTTGAGCGTAAC
CGCAAGGACAAGGACAGCAAGTTCCGCCTGATTCTCATCGAGTCTCGTAT
CCACCGTCTGTCTCGTTACTACAAGTCCGTCGGTGTCCTCCCCCCACCTG
GCGTTACGAGTCCGCCACTGCTTCCACCCTCGTTGCTTAAGCGCGTGCAC
TTCTTGTGCTGGGGTAGAAGTTGTTGTGGTGAAGTGGCTGTCGTCGTGGT
TGATTGGGTCGATCTGGAAGGGTTGATTCGCGATAGTCATGAAATAAAAT
TATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1150CAN33_1150Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1150-T1CAN33_1150-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1150-T1.exon1CAN33_1150-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_1150-T1.exon2CAN33_1150-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1150-T1.exon3CAN33_1150-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_1150-T1.exon4CAN33_1150-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_1150-T1.exon5CAN33_1150-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1150-T1.cdsCAN33_1150-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR009068
DBxrefInterPro:IPR000589
DBxrefInterPro:IPR012606
DBxrefPFAM:PF00312
DBxrefPFAM:PF08069
ProductRibosomal S13/S15 N-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:659721..660919 +
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