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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:794055..794982- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_11630-T1 ID=CAN33_11630-T1|Name=CAN33_11630-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=928bp|location=Sequence derived from alignment at NKJJ01000009.1:794055..794982- (Aspergillus niger FDAARGOS_311)
ATGCAGAGACGCTACCGGAAGAAGAGGCAGCCCAAGTCTCGCCAGGTGAG
TACGAGCCTCTTAGATGGACTGATCGGAGTTACCTAGCACTCCTCAGAGC
GACTTCCTCATATGCAATCCGGTAGCAGTGTAACTGACCGATTCAACCTT
CAACCAGGGCACGCCCGAGAGCCTCCACACGGAGGAAAAGCACAGTGATT
GTCGCAGCTCTCTGTCTAGTCGCGAAACAGATGGAACCTCCACTTCATCT
CCCCCAAAGCCGGCACAGGCAGGCTCCGTCCCAAGCCGCCGATTTAACCC
GGACGAGCTATACCCAAAACACTTCACTTTGAGCGACATCGAGGTTCCAG
CACACAACATGGTCTTTCTCGCTTGCCCAGGCTCGGAAAGAAAATGCCCC
CACTGCAAACGCCACACGCGTCACCTGGGCTGTATCGTGATTGCCATAGA
TGGAGCGTGCCGCAATAATGGCAGATACGGAGCCCGGGCGTCAACTGGGG
TCTACCACGGCCACGACCATCCCTTAAACGGAAGTGCCAGTCTTTCCCCC
AATCTCAAGCAAACAAGCCAGGTCGCCGAACTCGCGGCCTGCGAGAGGGC
TCTGCTTGGTGCGTACGTCATGCAAAAGTGCTGGGATGGATTATCCGAAA
TGACAGGAGATGGAGAAGAAAGGCTTCACACCGTGGTGATCAAGTCAGAC
TCGGAGTATGTGGTGCGCGGAATGACCGAATGGATCTTCAAATGGAAAGC
CAATGATTGGACTACCGCGAAGGGCTTGCCCGTCGCCAATCAAGAGCACT
TTAAGAAGATTGATTCTCTTGTCGAATCTCTCGAAAATGAGCAGGTCCCT
GTCCAGTTCTGGCAGGTTCCGAGAGAATTTAACCAGGAGGCGGATAGGCT
GGCAGCGTCTGCTCTGGATGATGATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:794055..794982- >CAN33_11630-T1 ID=CAN33_11630-T1|Name=CAN33_11630-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1632bp|location=Sequence derived from alignment at NKJJ01000009.1:794055..794982- (Aspergillus niger FDAARGOS_311)
GGCACGCCCGAGAGCCTCCACACGGAGGAAAAGCACAGTGATTGTCGCAG
CTCTCTGTCTAGTCGCGAAACAGATGGAACCTCCACTTCATCTCCCCCAA
AGCCGGCACAGGCAGGCTCCGTCCCAAGCCGCCGATTTAACCCGGACGAG
CTATACCCAAAACACTTCACTTTGAGCGACATCGAGGTTCCAGCACACAA
CATGGTCTTTCTCGCTTGCCCAGGCTCGGAAAGAAAATGCCCCCACTGCA
AACGCCACACGCGTCACCTGGGCTGTATCGTGATTGCCATAGATGGAGCG
TGCCGCAATAATGGCAGATACGGAGCCCGGGCGTCAACTGGGGTCTACCA
CGGCCACGACCATCCCTTAAACGGAAGTGCCAGTCTTTCCCCCAATCTCA
AGCAAACAAGCCAGGTCGCCGAACTCGCGGCCTGCGAGAGGGCTCTGCTT
GGTGCGTACGTCATGCAAAAGTGCTGGGATGGATTATCCGAAATGACAGG
AGATGGAGAAGAAAGGCTTCACACCGTGGTGATCAAGTCAGACTCGGAGT
ATGTGGTGCGCGGAATGACCGAATGGATCTTCAAATGGAAAGCCAATGAT
TGGACTACCGCGAAGGGCTTGCCCGTCGCCAATCAAGAGCACTTTAAGAA
GATTGATTCTCTTGTCGAATCTCTCGAAAATGAGCAGGTCCCTGTCCAGT
TCTGGCAGGTTCCGAGAGAATTTAACCAGGAGGCGGATAGGCTGGCAGCG
TCTGCTCTGGATGATGATTGAATGCAGAGACGCTACCGGAAGAAGAGGCA
GCCCAAGTCTCGCCAGGGCACGCCCGAGAGCCTCCACACGGAGGAAAAGC
ACAGTGATTGTCGCAGCTCTCTGTCTAGTCGCGAAACAGATGGAACCTCC
ACTTCATCTCCCCCAAAGCCGGCACAGGCAGGCTCCGTCCCAAGCCGCCG
ATTTAACCCGGACGAGCTATACCCAAAACACTTCACTTTGAGCGACATCG
AGGTTCCAGCACACAACATGGTCTTTCTCGCTTGCCCAGGCTCGGAAAGA
AAATGCCCCCACTGCAAACGCCACACGCGTCACCTGGGCTGTATCGTGAT
TGCCATAGATGGAGCGTGCCGCAATAATGGCAGATACGGAGCCCGGGCGT
CAACTGGGGTCTACCACGGCCACGACCATCCCTTAAACGGAAGTGCCAGT
CTTTCCCCCAATCTCAAGCAAACAAGCCAGGTCGCCGAACTCGCGGCCTG
CGAGAGGGCTCTGCTTGGTGCGTACGTCATGCAAAAGTGCTGGGATGGAT
TATCCGAAATGACAGGAGATGGAGAAGAAAGGCTTCACACCGTGGTGATC
AAGTCAGACTCGGAGTATGTGGTGCGCGGAATGACCGAATGGATCTTCAA
ATGGAAAGCCAATGATTGGACTACCGCGAAGGGCTTGCCCGTCGCCAATC
AAGAGCACTTTAAGAAGATTGATTCTCTTGTCGAATCTCTCGAAAATGAG
CAGGTCCCTGTCCAGTTCTGGCAGGTTCCGAGAGAATTTAACCAGGAGGC
GGATAGGCTGGCAGCGTCTGCTCTGGATGATGATTGAATGCAGAGACGCT
ACCGGAAGAAGAGGCAGCCCAAGTCTCGCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0004523 | RNA-DNA hybrid ribonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR002156 |
| DBxref | PFAM:PF00075 |
| Product | RNase H family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:794055..794982 - |
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