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CAN33_1165-T1, CAN33_1165-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1165-T1
Unique NameCAN33_1165-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:666545..667722-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1165-T1 ID=CAN33_1165-T1|Name=CAN33_1165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1178bp|location=Sequence derived from alignment at NKJJ01000004.1:666545..667722- (Aspergillus niger FDAARGOS_311)
ATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGGTATGTCAAC
CGGTTATCTTGCCTCGCCAGCCCAGCTGATTTCCCCGGTAACATCATCAC
AACAATGCTGACTCGCTGCTCAGACGAGCCCCGTTTCGCTCGCGACCGCA
GCGCATCTCCTCGCGATGAGCCTCGTGCTGATCGCACCCGTAGCCGTTCT
CCCAACGGTCGCGTCGATGACCGGTATGTTTACGTGCAGATCTAGCTAGC
TAGCTAGCCAACCCCCAGACGTCAGCCAGACTGACTGGAGCTCCTCATAA
CTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGTGCT
ATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCTGAC
CGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAAACT
GCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGCTTC
GTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCTCCA
GGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTCGTA
GCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAGCGT
GGTTAGTTATCCAGACTCCCTCTGTATATTGATATGTGGCTTACGCGTGT
CCAATATCGTCAGATTTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCG
CTATGACGATCGTCGTGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACG
ACTACCGCTATGGCCGTTATGACTCCTACAGCGACCGCCGCGACTATGGT
CGTGACTACCGTGACTACGGTGGCCGCCGTGACTACCGTGATGACTATGG
ATACCGCGGTGGTGGCAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTG
GCCGCGAGGACCGTTACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAA
GAGCGTCGTGGCGGCAGCGGTGGTGGCTACTATGACCGCGATGCTAACCC
GCCCAGCTACGGCTCCGCAGCTCCTGCTCGTGATGCCTACGCCGGCGGCG
GTGGCAGCAGCGGTGGCGGCGGCGGCGGCGGCCGTTCCTATGATCCCCGT
GACGACCGTTACAGCACTAGGTAGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:666545..667722-

>CAN33_1165-T1 ID=CAN33_1165-T1|Name=CAN33_1165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3930bp|location=Sequence derived from alignment at NKJJ01000004.1:666545..667722- (Aspergillus niger FDAARGOS_311)
GTAGGTGAATTTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATG
ACGATCGTCGTGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTAC
CGCTATGGCCGTTATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGA
CTACCGTGACTACGGTGGCCGCCGTGACTACCGTGATGACTATGGATACC
GCGGTGGTGGCAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGC
GAGGACCGTTACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCC
GCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGTGCTATCAA
CACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCTGACCGAGT
CGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAAACTGCTCG
ATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGCTTCGTCAA
GATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCTCCAGGGCG
AGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTCGTAGCCGT
CCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAGCGTGACGA
GCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGAGCCTCGTG
CTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATGACCGATGG
CTACAGAGTACGATAACGAGAACGGTCGCTACGACGGTAGGTGAATTTCC
GTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCGTGGT
CCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCCGTTA
TGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGACTACG
GTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGGCAGC
AGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTTACAG
CCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCCGCCCCCATTGATCC
CCGCAAGTCTCTCGATGACGAAGAGGGTGCTATCAACACTGGATCCAACC
TGTTCGTCACTGGTATCCACCCCCGTCTGACCGAGTCGGATATTTCGCGT
CTGTTCGAGAAGTACGGTGATGTCGAAAACTGCTCGATCATGGTCGACCC
CCACACCAAGGAGTCTCGTGGATTCGGCTTCGTCAAGATGGTCACTGCCG
AGCAGGCCGATGCCGCTAAGGAGGGTCTCCAGGGCGAGGTCATCGAAGGT
CGCACCCTGAGCATTGAGAAGGCTCGTCGTAGCCGTCCCAGAACCCCGAC
CCCCGGAAAGTACTTCGGTCCTCCCAAGCGTGACGAGCCCCGTTTCGCTC
GCGACCGCAGCGCATCTCCTCGCGATGAGCCTCGTGCTGATCGCACCCGT
AGCCGTTCTCCCAACGGTCGCGTCGATGACCGATGGCTACAGAGTACGAT
AACGAGAACGGTCGCTACGACGGTAGGTGAATTTCCGTGGAGGTCACCGT
GGCGGCCGTGGCGATCGCTATGACGATCGTCGTGGTCCTTATGGTGGTAG
CTGGCGCCGTGGCGACGACTACCGCTATGGCCGTTATGACTCCTACAGCG
ACCGCCGCGACTATGGTCGTGACTACCGTGACTACGGTGGCCGCCGTGAC
TACCGTGATGACTATGGATACCGCGGTGGTGGCAGCAGCGGTGGCATTGA
TCGCTATGCTTCCGGTGGCCGCGAGGACCGTTACAGCCGCGAGGACCGTC
GTGACGATCGCCGTGAAGAGCCGCCCCCATTGATCCCCGCAAGTCTCTCG
ATGACGAAGAGGGTGCTATCAACACTGGATCCAACCTGTTCGTCACTGGT
ATCCACCCCCGTCTGACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTA
CGGTGATGTCGAAAACTGCTCGATCATGGTCGACCCCCACACCAAGGAGT
CTCGTGGATTCGGCTTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCC
GCTAAGGAGGGTCTCCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCAT
TGAGAAGGCTCGTCGTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACT
TCGGTCCTCCCAAGCGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCA
TCTCCTCGCGATGAGCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAA
CGGTCGCGTCGATGACCGATGGCTACAGAGTACGATAACGAGAACGGTCG
CTACGACGGTAGGTGAATTTCCGTGGAGGTCACCGTGGCGGCCGTGGCGA
TCGCTATGACGATCGTCGTGGTCCTTATGGTGGTAGCTGGCGCCGTGGCG
ACGACTACCGCTATGGCCGTTATGACTCCTACAGCGACCGCCGCGACTAT
GGTCGTGACTACCGTGACTACGGTGGCCGCCGTGACTACCGTGATGACTA
TGGATACCGCGGTGGTGGCAGCAGCGGTGGCATTGATCGCTATGCTTCCG
GTGGCCGCGAGGACCGTTACAGCCGCGAGGACCGTCGTGACGATCGCCGT
GAAGAGCCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGT
GCTATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCT
GACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAA
ACTGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGC
TTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCT
CCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTC
GTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAG
CGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGA
GCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATG
ACCGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGGTAGGT
GAATTTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATC
GTCGTGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTAT
GGCCGTTATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCG
TGACTACGGTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTG
GTGGCAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGAC
CGTTACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCCGCCCCC
ATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGTGCTATCAACACTGG
ATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCTGACCGAGTCGGATA
TTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAAACTGCTCGATCATG
GTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGCTTCGTCAAGATGGT
CACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCTCCAGGGCGAGGTCA
TCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTCGTAGCCGTCCCAGA
ACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAGCGTGACGAGCCCCG
TTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGAGCCTCGTGCTGATC
GCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATGACCGATGGCTACAG
AGTACGATAACGAGAACGGTCGCTACGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1165CAN33_1165Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1165-T1CAN33_1165-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1165-T1.cdsCAN33_1165-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1165-T1.exon5CAN33_1165-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_1165-T1.exon4CAN33_1165-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_1165-T1.exon3CAN33_1165-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_1165-T1.exon2CAN33_1165-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1165-T1.exon1CAN33_1165-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:666545..667722 -
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