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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:853406..854403+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_11755-T1 ID=CAN33_11755-T1|Name=CAN33_11755-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=998bp|location=Sequence derived from alignment at NKJJ01000009.1:853406..854403+ (Aspergillus niger FDAARGOS_311)
ATGCAGATATTCAAACGCATCTGGCCTCAACTATTCCCCGCCAAACCCAC
CCTCACGGCAGACAGTCTGCCTCCCCAAACTGGCCGCGTCGTGATCATCA
CCGGTGCCACCTCCGGTCTGGGGCTAGAATTGGCTCGCATCCTCTACCAT
GCAGGAGCAACCGTTTACATCGCCGCCCGCAACGAAACCAAGGCCCACAA
TGTCATAAACACCATCACCGCCACCACTTCCCCCAATCCCACAACTCAGC
CGGGCGAACTCATCTACCTCCCCATTGATCTCGCCGACCTTCGCACTATC
CCTATCTTCGTGAATGCATTCCTCGCCAGCTCAAACAGACTAGATCTCCT
CTTCAACAACGCCGCGGTGGCATGTCTCCCCCAACCCAGGTCACAGCCCA
AGGCTACGAACCTCACATCGGCATCAACTGCGCAGCTTCCTACCTCCTGA
CTTCCCTCCTCTCTCCTATTTTGACTTCCACAGCCCAAAGCCCATCTACA
CCACCCAACTCCGTCCGTGTCATCTTCACCTCCAGCATGGTCGTCGACTT
CCTCGCTCCGACGGGCGGTGTTCCGTCCTCGGCCCTCACTTCTTCCCCGG
ATCCAAAATCAGACCCTAACACCAACTACGCCATCAGCAAAACCGGTAAC
TGGTTTCTGGCGGCGCATTTTGCCTCTACCCTTGGGTCAAATGGTGTAGT
CAGCTTTACTCAGAATCCCGGGAATATTGATACCTCCATTTATGACAATG
CGCCGAGATTGAGTGTGTGGGTTAGTAAACCGGTATTCTATACTCCGGAG
GTTGGTGTAAGTACCCTCCTTTGGGCGGGATTTGAGGAGGGGATTACCGT
GGATGATGGGGGCAGGTATGTGATTCCATTTGGGAGGTGGCATCCTAGTC
CGAGGGAGGATTTGTTGGGGGCGATGAGGGAGGGAGGATCGGGGGAGATG
GGGAGGTTTGTGGAGTGGTGCGAGAGGGTTACGAAGGAGTTTCGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:853406..854403+ >CAN33_11755-T1 ID=CAN33_11755-T1|Name=CAN33_11755-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1950bp|location=Sequence derived from alignment at NKJJ01000009.1:853406..854403+ (Aspergillus niger FDAARGOS_311)
ATGCAGATATTCAAACGCATCTGGCCTCAACTATTCCCCGCCAAACCCAC
CCTCACGGCAGACAGTCTGCCTCCCCAAACTGGCCGCGTCGTGATCATCA
CCGGTGCCACCTCCGGTCTGGGGCTAGAATTGGCTCGCATCCTCTACCAT
GCAGGAGCAACCGTTTACATCGCCGCCCGCAACGAAACCAAGGCCCACAA
TGTCATAAACACCATCACCGCCACCACTTCCCCCAATCCCACAACTCAGC
CGGGCGAACTCATCTACCTCCCCATTGATCTCGCCGACCTTCGCACTATC
CCTATCTTCGTGAATGCATTCCTCGCCAGCTCAAACAGACTAGATCTCCT
CTTCAACAACGCCGCGGTCACAGCCCAAGGCTACGAACCTCACATCGGCA
TCAACTGCGCAGCTTCCTACCTCCTGACTTCCCTCCTCTCTCCTATTTTG
ACTTCCACAGCCCAAAGCCCATCTACACCACCCAACTCCGTCCGTGTCAT
CTTCACCTCCAGCATGGTCGTCGACTTCCTCGCTCCGACGGGCGGTGTTC
CGTCCTCGGCCCTCACTTCTTCCCCGGATCCAAAATCAGACCCTAACACC
AACTACGCCATCAGCAAAACCGGTAACTGGTTTCTGGCGGCGCATTTTGC
CTCTACCCTTGGGTCAAATGGTGTAGTCAGCTTTACTCAGAATCCCGGGA
ATATTGATACCTCCATTTATGACAATGCGCCGAGATTGAGTGTGTGGGTT
AGTAAACCGGTATTCTATACTCCGGAGGTTGGTGTAAGTACCCTCCTTTG
GGCGGGATTTGAGGAGGGGATTACCGTGGATGATGGGGGCAGGTATGTGA
TTCCATTTGGGAGGTGGCATCCTAGTCCGAGGGAGGATTTGTTGGGGGCG
ATGAGGGAGGGAGGATCGGGGGAGATGGGGAGGTTTGTGGAGTGGTGCGA
GAGGGTTACGAAGGAGTTTCGGTAGATGCAGATATTCAAACGCATCTGGC
CTCAACTATTCCCCGCCAAACCCACCCTCACGGCAGACAGTCTGCCTCCC
CAAACTGGCCGCGTCGTGATCATCACCGGTGCCACCTCCGGTCTGGGGCT
AGAATTGGCTCGCATCCTCTACCATGCAGGAGCAACCGTTTACATCGCCG
CCCGCAACGAAACCAAGGCCCACAATGTCATAAACACCATCACCGCCACC
ACTTCCCCCAATCCCACAACTCAGCCGGGCGAACTCATCTACCTCCCCAT
TGATCTCGCCGACCTTCGCACTATCCCTATCTTCGTGAATGCATTCCTCG
CCAGCTCAAACAGACTAGATCTCCTCTTCAACAACGCCGCGGTCACAGCC
CAAGGCTACGAACCTCACATCGGCATCAACTGCGCAGCTTCCTACCTCCT
GACTTCCCTCCTCTCTCCTATTTTGACTTCCACAGCCCAAAGCCCATCTA
CACCACCCAACTCCGTCCGTGTCATCTTCACCTCCAGCATGGTCGTCGAC
TTCCTCGCTCCGACGGGCGGTGTTCCGTCCTCGGCCCTCACTTCTTCCCC
GGATCCAAAATCAGACCCTAACACCAACTACGCCATCAGCAAAACCGGTA
ACTGGTTTCTGGCGGCGCATTTTGCCTCTACCCTTGGGTCAAATGGTGTA
GTCAGCTTTACTCAGAATCCCGGGAATATTGATACCTCCATTTATGACAA
TGCGCCGAGATTGAGTGTGTGGGTTAGTAAACCGGTATTCTATACTCCGG
AGGTTGGTGTAAGTACCCTCCTTTGGGCGGGATTTGAGGAGGGGATTACC
GTGGATGATGGGGGCAGGTATGTGATTCCATTTGGGAGGTGGCATCCTAG
TCCGAGGGAGGATTTGTTGGGGGCGATGAGGGAGGGAGGATCGGGGGAGA
TGGGGAGGTTTGTGGAGTGGTGCGAGAGGGTTACGAAGGAGTTTCGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:853406..854403 + |
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