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CAN33_12240-T1, CAN33_12240-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12240-T1
Unique NameCAN33_12240-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:34273..35193+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12240-T1 ID=CAN33_12240-T1|Name=CAN33_12240-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=921bp|location=Sequence derived from alignment at NKJJ01000010.1:34273..35193+ (Aspergillus niger FDAARGOS_311)
ATGCAACGCCGTGCAGCACTTACCGGCCTCAGCTATATGCGTCGCTGCTC
AACGTTTACTGGGTTGCGTTATAACTTGCTTCCTGAGCATCAACTTCCGC
CTTGGACTCAGCATAAGGTAGCACTTCCGTCTAATAAAAGGAGCTTTTCC
AGTTCGCCCTTTTGGTGTAAAAAGAAGGACAAGACGAAAACTACATCTGC
TGCAGATTCTGCGAAGCCGTTGCCAAAAGCAGGCGCAGGCTCCGAAGACC
CGCATGATTTTTCACAGCTGCATGACGGCATAGCGGCTGCCCTGTCTCGA
CTCAGAGACGAACTCTCTAAGATGCGTGTCGGGGGAGGTTCAATACCGTA
TCAATTGAGAGTCTTCGTGTGCAGCTGAGCAAGAGCAGCAAGCAATCGAT
CAAGCTGGGCGACCTTGCTCAAGTTGTTCCTAAGGGTGGACGAATGGTGA
CTATCTTGGCCTCTGACGAAGATGTGAGTTACTGGCGCCTTAAAAGAATG
TCTTTGCTATCACGAAGCCTACAGATCCTCTCAATCTTCCATTTTTGCTC
TAACGCAGACTGTTATCGATATAGCATGTGAAGCCCATTCGCTCGTCAAT
AGTCTCCTCCAACTTGTCGTTAACCCCGCAAGCCGACCCTCACAACTCCC
TTCAGCTCAATGTCACGATCCCCCACCGACTAAAGAGTCCCGGGATCAAA
CGATCGCTATGGCAAAGGCGGCAATGGAGAAAGCTGCCGGTGCCGTCCGT
GATTCACGCAGCGCTGTGCATAAACGTCTTCAGGATCTGCAGAAAAAGAA
GATTGCCAGGCCAGATGACGTTCGGAAGGCCCAGGAACAGATGGAAAAGC
TTGCAGAGAAAGGGCAGAAGGAGGTGAAGGAACTGTTTGAGACTACAAGG
AAGGCTATGGAGCGGGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:34273..35193+

>CAN33_12240-T1 ID=CAN33_12240-T1|Name=CAN33_12240-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2367bp|location=Sequence derived from alignment at NKJJ01000010.1:34273..35193+ (Aspergillus niger FDAARGOS_311)
ATGCAACGCCGTGCAGCACTTACCGGCCTCAGCTATATGCGTCGCTGCTC
AACGTTTACTGGGTTGCGTTATAACTTGCTTCCTGAGCATCAACTTCCGC
CTTGGACTCAGCATAAGGTAGCACTTCCGTCTAATAAAAGGAGCTTTTCC
AGTTCGCCCTTTTGGTGTAAAAAGAAGGACAAGACGAAAACTACATCTGC
TGCAGATTCTGCGAAGCCGTTGCCAAAAGCAGGCGCAGGCTCCGAAGACC
CGCATGATTTTTCACAGCTGCATGACGGCATAGCGGCTGCCCTGTCTCGA
CTCAGAGACGAACTCTCTAAGATGCGTCTGAGCAAGAGCAGCAAGCAATC
GATCAAGCTGGGCGACCTTGCTCAAGTTGTTCCTAAGGGTGGACGAATGG
TGACTATCTTGGCCTCTGACGAAGATACTGTTATCGATATAGCATGTGAA
GCCCATTCGCTCGTCAATAGTCTCCTCCAACTTGTCGTTAACCCCGCAAG
CCGACCCTCACAACTCCCTTCAGCTCAATGTCACGATCCCCCACCGACTA
AAGAGTCCCGGGATCAAACGATCGCTATGGCAAAGGCGGCAATGGAGAAA
GCTGCCGGTGCCGTCCGTGATTCACGCAGCGCTGTGCATAAACGTCTTCA
GGATCTGCAGAAAAAGAAGATTGCCAGGCCAGATGACGTTCGGAAGGCCC
AGGAACAGATGGAAAAGCTTGCAGAGAAAGGGCAGAAGGAGGTGAAGGAA
CTGTTTGAGACTACAAGGAAGGCTATGGAGCGGGCGTAAATGCAACGCCG
TGCAGCACTTACCGGCCTCAGCTATATGCGTCGCTGCTCAACGTTTACTG
GGTTGCGTTATAACTTGCTTCCTGAGCATCAACTTCCGCCTTGGACTCAG
CATAAGGTAGCACTTCCGTCTAATAAAAGGAGCTTTTCCAGTTCGCCCTT
TTGGTGTAAAAAGAAGGACAAGACGAAAACTACATCTGCTGCAGATTCTG
CGAAGCCGTTGCCAAAAGCAGGCGCAGGCTCCGAAGACCCGCATGATTTT
TCACAGCTGCATGACGGCATAGCGGCTGCCCTGTCTCGACTCAGAGACGA
ACTCTCTAAGATGCGTCTGAGCAAGAGCAGCAAGCAATCGATCAAGCTGG
GCGACCTTGCTCAAGTTGTTCCTAAGGGTGGACGAATGGTGACTATCTTG
GCCTCTGACGAAGATACTGTTATCGATATAGCATGTGAAGCCCATTCGCT
CGTCAATAGTCTCCTCCAACTTGTCGTTAACCCCGCAAGCCGACCCTCAC
AACTCCCTTCAGCTCAATGTCACGATCCCCCACCGACTAAAGAGTCCCGG
GATCAAACGATCGCTATGGCAAAGGCGGCAATGGAGAAAGCTGCCGGTGC
CGTCCGTGATTCACGCAGCGCTGTGCATAAACGTCTTCAGGATCTGCAGA
AAAAGAAGATTGCCAGGCCAGATGACGTTCGGAAGGCCCAGGAACAGATG
GAAAAGCTTGCAGAGAAAGGGCAGAAGGAGGTGAAGGAACTGTTTGAGAC
TACAAGGAAGGCTATGGAGCGGGCGTAAATGCAACGCCGTGCAGCACTTA
CCGGCCTCAGCTATATGCGTCGCTGCTCAACGTTTACTGGGTTGCGTTAT
AACTTGCTTCCTGAGCATCAACTTCCGCCTTGGACTCAGCATAAGGTAGC
ACTTCCGTCTAATAAAAGGAGCTTTTCCAGTTCGCCCTTTTGGTGTAAAA
AGAAGGACAAGACGAAAACTACATCTGCTGCAGATTCTGCGAAGCCGTTG
CCAAAAGCAGGCGCAGGCTCCGAAGACCCGCATGATTTTTCACAGCTGCA
TGACGGCATAGCGGCTGCCCTGTCTCGACTCAGAGACGAACTCTCTAAGA
TGCGTCTGAGCAAGAGCAGCAAGCAATCGATCAAGCTGGGCGACCTTGCT
CAAGTTGTTCCTAAGGGTGGACGAATGGTGACTATCTTGGCCTCTGACGA
AGATACTGTTATCGATATAGCATGTGAAGCCCATTCGCTCGTCAATAGTC
TCCTCCAACTTGTCGTTAACCCCGCAAGCCGACCCTCACAACTCCCTTCA
GCTCAATGTCACGATCCCCCACCGACTAAAGAGTCCCGGGATCAAACGAT
CGCTATGGCAAAGGCGGCAATGGAGAAAGCTGCCGGTGCCGTCCGTGATT
CACGCAGCGCTGTGCATAAACGTCTTCAGGATCTGCAGAAAAAGAAGATT
GCCAGGCCAGATGACGTTCGGAAGGCCCAGGAACAGATGGAAAAGCTTGC
AGAGAAAGGGCAGAAGGAGGTGAAGGAACTGTTTGAGACTACAAGGAAGG
CTATGGAGCGGGCGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12240CAN33_12240Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12240-T1.exon1CAN33_12240-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_12240-T1.exon2CAN33_12240-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12240-T1.exon3CAN33_12240-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12240-T1.cdsCAN33_12240-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12240-T1CAN33_12240-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036191
DBxrefInterPro:IPR023584
DBxrefPFAM:PF01765
ProductRibosome recycling factor family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:34273..35193 +
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